Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:01:43 (30151): wrapper (7.7.26015): starting
12:01:43 (30151): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 12:01:43] Arguments: --nthreads 8
[2025-12-13 12:01:43] Threads: 8
[2025-12-13 12:01:43] Checking for CVMFS
[2025-12-13 12:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 12:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 12:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 12:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 12:01:43] 2.11.2.0 8814 142415 134572 153967 1 188 16242518 18432001 1833 130560 0 101623616 99.976 5819961 32438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 12:01:43] CVMFS is ok
[2025-12-13 12:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 12:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 12:01:43] Further information can be found at the LHC@home message board.
[2025-12-13 12:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 12:01:43] Checking for apptainer binary...
[2025-12-13 12:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 12:01:43] Running /usr/bin/apptainer --version
[2025-12-13 12:01:43] apptainer version 1.3.2-1.el7
[2025-12-13 12:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 12:01:44] c-206-19.aglt2.org
[2025-12-13 12:01:44] apptainer works
[2025-12-13 12:01:44] Set ATHENA_PROC_NUMBER=8
[2025-12-13 12:01:44] Set ATHENA_CORE_NUMBER=8
[2025-12-13 12:01:44] Starting ATLAS job with PandaID=6929335069
[2025-12-13 12:01:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:57:18]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:57:18] 2025-12-13 19:56:25,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:57:18] 2025-12-13 19:56:25,804 | INFO     | sufficient remaining disk space (28081913856 B)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,805 | INFO     | fitting pss+swap vs Time
[2025-12-13 14:57:18] 2025-12-13 19:56:25,805 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,806 | INFO     | sum of square deviations: 1577789583.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,807 | INFO     | sum of deviations: 17229652733.499996
[2025-12-13 14:57:18] 2025-12-13 19:56:25,807 | INFO     | mean x: 1765650556.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,807 | INFO     | mean y: 2447088.1104651163
[2025-12-13 14:57:18] 2025-12-13 19:56:25,807 | INFO     | intersect: -19278670156.536736
[2025-12-13 14:57:18] 2025-12-13 19:56:25,808 | INFO     | chi2: 2.211927801711946
[2025-12-13 14:57:18] 2025-12-13 19:56:25,808 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,809 | INFO     | sum of deviations: 27770566956.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,809 | INFO     | mean x: 1765650404.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,809 | INFO     | mean y: 2458812.9221556885
[2025-12-13 14:57:18] 2025-12-13 19:56:25,809 | INFO     | intersect: -33950466608.229805
[2025-12-13 14:57:18] 2025-12-13 19:56:25,810 | INFO     | chi2: 1.4401378409181935
[2025-12-13 14:57:18] 2025-12-13 19:56:25,810 | INFO     | current chi2=1.4401378409181935 (change=34.892185911150314 %)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,810 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,811 | INFO     | sum of deviations: 26805385031.500004
[2025-12-13 14:57:18] 2025-12-13 19:56:25,811 | INFO     | mean x: 1765650251.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,811 | INFO     | mean y: 2457643.141975309
[2025-12-13 14:57:18] 2025-12-13 19:56:25,811 | INFO     | intersect: -35899638985.199234
[2025-12-13 14:57:18] 2025-12-13 19:56:25,812 | INFO     | chi2: 1.441047735627678
[2025-12-13 14:57:18] 2025-12-13 19:56:25,812 | INFO     | current chi2=1.441047735627678 (change=-0.06318108472897457 %)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,812 | INFO     | right removable region: 161
[2025-12-13 14:57:18] 2025-12-13 19:56:25,812 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,813 | INFO     | sum of deviations: -8960013365.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,813 | INFO     | mean x: 1765650709.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,814 | INFO     | mean y: 2476606.293413174
[2025-12-13 14:57:18] 2025-12-13 19:56:25,814 | INFO     | intersect: 10957194188.666746
[2025-12-13 14:57:18] 2025-12-13 19:56:25,814 | INFO     | chi2: 0.8137884614920055
[2025-12-13 14:57:18] 2025-12-13 19:56:25,814 | INFO     | current chi2=0.8137884614920055 (change=63.20908571870362 %)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,815 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,815 | INFO     | sum of deviations: -8422488776.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,816 | INFO     | mean x: 1765650861.5
[2025-12-13 14:57:18] 2025-12-13 19:56:25,816 | INFO     | mean y: 2475904.858024691
[2025-12-13 14:57:18] 2025-12-13 19:56:25,816 | INFO     | intersect: 11283235723.013588
[2025-12-13 14:57:18] 2025-12-13 19:56:25,816 | INFO     | chi2: 0.8020306924052549
[2025-12-13 14:57:18] 2025-12-13 19:56:25,816 | INFO     | current chi2=0.8020306924052549 (change=1.4448188495071248 %)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,817 | INFO     | left removable region: 20
[2025-12-13 14:57:18] 2025-12-13 19:56:25,817 | INFO     | sum of square deviations: 869188390.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | sum of deviations: 2333772648.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | mean x: 1765650831.0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929335069: 3474103 B (within 2768240640 B limit)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | mean y: 2488638.2624113476
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | intersect: -4738287541.808598
[2025-12-13 14:57:18] 2025-12-13 19:56:25,818 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929335069/HITS.47899042._000109.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,819 | INFO     | chi2: 0.0005160279290147154
[2025-12-13 14:57:18] 2025-12-13 19:56:25,819 | INFO     | total size of present files: 0 B (workdir size: 3474103 B)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,819 | INFO     | current memory leak: 2.69 B/s (using 141 data points, chi2=0.00)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,819 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929335069/HITS.47899042._000109.pool.root.1 since it does not exist
[2025-12-13 14:57:18] 2025-12-13 19:56:25,820 | INFO     | could have reported an average CPU frequency of 2561 MHz (9 samples)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,820 | INFO     | ..............................
[2025-12-13 14:57:18] 2025-12-13 19:56:25,820 | INFO     | . Timing measurements:
[2025-12-13 14:57:18] 2025-12-13 19:56:25,820 | INFO     | . get job = 0 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . initial setup = 2 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . payload setup = 4 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . stage-in = 0 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . payload execution = 10438 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . stage-out = 1 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | . log creation = 0 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,821 | INFO     | ..............................
[2025-12-13 14:57:18] 2025-12-13 19:56:25,971 | INFO     | 
[2025-12-13 14:57:18] 2025-12-13 19:56:25,971 | INFO     | job summary report
[2025-12-13 14:57:18] 2025-12-13 19:56:25,972 | INFO     | --------------------------------------------------
[2025-12-13 14:57:18] 2025-12-13 19:56:25,972 | INFO     | PanDA job id: 6929335069
[2025-12-13 14:57:18] 2025-12-13 19:56:25,972 | INFO     | task id: 47899042
[2025-12-13 14:57:18] 2025-12-13 19:56:25,972 | INFO     | errors: (none)
[2025-12-13 14:57:18] 2025-12-13 19:56:25,973 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:57:18] 2025-12-13 19:56:25,973 | INFO     | pilot state: finished 
[2025-12-13 14:57:18] 2025-12-13 19:56:25,973 | INFO     | transexitcode: 0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,974 | INFO     | exeerrorcode: 0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,974 | INFO     | exeerrordiag: 
[2025-12-13 14:57:18] 2025-12-13 19:56:25,974 | INFO     | exitcode: 0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,974 | INFO     | exitmsg: OK
[2025-12-13 14:57:18] 2025-12-13 19:56:25,975 | INFO     | cpuconsumptiontime: 79412 s
[2025-12-13 14:57:18] 2025-12-13 19:56:25,975 | INFO     | nevents: 400
[2025-12-13 14:57:18] 2025-12-13 19:56:25,975 | INFO     | neventsw: 0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,975 | INFO     | pid: 8064
[2025-12-13 14:57:18] 2025-12-13 19:56:25,976 | INFO     | pgrp: 8064
[2025-12-13 14:57:18] 2025-12-13 19:56:25,976 | INFO     | corecount: 8
[2025-12-13 14:57:18] 2025-12-13 19:56:25,976 | INFO     | event service: False
[2025-12-13 14:57:18] 2025-12-13 19:56:25,977 | INFO     | sizes: {0: 2283767, 1: 2283966, 4: 2284228, 12: 2284256, 10447: 2312863, 10449: 2321861, 10450: 2322045, 10455: 2322331}
[2025-12-13 14:57:18] 2025-12-13 19:56:25,977 | INFO     | --------------------------------------------------
[2025-12-13 14:57:18] 2025-12-13 19:56:25,977 | INFO     | 
[2025-12-13 14:57:18] 2025-12-13 19:56:25,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 14:57:18] 2025-12-13 19:56:25,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:25,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,001 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,001 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,001 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,001 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:57:18] 2025-12-13 19:56:26,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:57:18] 2025-12-13 19:56:26,002 | INFO     | job 6929335069 has completed (purged errors)
[2025-12-13 14:57:18] 2025-12-13 19:56:26,002 | INFO     | overall cleanup function is called
[2025-12-13 14:57:18] 2025-12-13 19:56:26,117 | INFO     | number of running child processes to parent process 8064: 1
[2025-12-13 14:57:18] 2025-12-13 19:56:26,117 | INFO     | maximum number of monitored processes: 6
[2025-12-13 14:57:18] 2025-12-13 19:56:26,118 | INFO     | aborting job monitoring since job object (job id=6929335069) has expired
[2025-12-13 14:57:18] 2025-12-13 19:56:27,008 | INFO     | --- collectZombieJob: --- 10, [8064]
[2025-12-13 14:57:18] 2025-12-13 19:56:27,008 | INFO     | zombie collector waiting for pid 8064
[2025-12-13 14:57:18] 2025-12-13 19:56:27,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:57:18] 2025-12-13 19:56:27,008 | INFO     | collected zombie processes
[2025-12-13 14:57:18] 2025-12-13 19:56:27,008 | INFO     | will attempt to kill all subprocesses of pid=8064
[2025-12-13 14:57:18] 2025-12-13 19:56:27,148 | INFO     | process IDs to be killed: [8064] (in reverse order)
[2025-12-13 14:57:18] 2025-12-13 19:56:27,203 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:57:18] 2025-12-13 19:56:27,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:57:18] 2025-12-13 19:56:27,206 | INFO     | did not find any defunct processes belonging to 8064
[2025-12-13 14:57:18] 2025-12-13 19:56:27,208 | INFO     | did not find any defunct processes belonging to 8064
[2025-12-13 14:57:18] 2025-12-13 19:56:27,208 | INFO     | ready for new job
[2025-12-13 14:57:18] 2025-12-13 19:56:27,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:57:18] 2025-12-13 19:56:27,210 | INFO     | ***************************************
[2025-12-13 14:57:18] 2025-12-13 19:56:27,210 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:57:18] 2025-12-13 19:56:27,210 | INFO     | ***************************************
[2025-12-13 14:57:18] 2025-12-13 19:56:27,210 | INFO     | 
[2025-12-13 14:57:18] 2025-12-13 19:56:27,211 | INFO     | architecture information:
[2025-12-13 14:57:18] 2025-12-13 19:56:27,211 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:57:18] 2025-12-13 19:56:27,221 | INFO     | cat /etc/os-release:
[2025-12-13 14:57:18] NAME="CentOS Linux"
[2025-12-13 14:57:18] VERSION="7 (Core)"
[2025-12-13 14:57:18] ID="centos"
[2025-12-13 14:57:18] ID_LIKE="rhel fedora"
[2025-12-13 14:57:18] VERSION_ID="7"
[2025-12-13 14:57:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:57:18] ANSI_COLOR="0;31"
[2025-12-13 14:57:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:57:18] HOME_URL="https://www.centos.org/"
[2025-12-13 14:57:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:57:18] 
[2025-12-13 14:57:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:57:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:57:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:57:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:57:18] 
[2025-12-13 14:57:18] 2025-12-13 19:56:27,221 | INFO     | ***************************************
[2025-12-13 14:57:18] 2025-12-13 19:56:27,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 14:57:18] 2025-12-13 19:56:27,737 | INFO     | sufficient remaining disk space (28087156736 B)
[2025-12-13 14:57:18] 2025-12-13 19:56:27,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:57:18] 2025-12-13 19:56:27,738 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:57:18] 2025-12-13 19:56:27,738 | INFO     | update_server=False
[2025-12-13 14:57:18] 2025-12-13 19:56:27,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:57:18] 2025-12-13 19:56:27,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:57:18] 2025-12-13 19:56:27,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:57:18] 2025-12-13 19:56:27,739 | INFO     | aborting loop
[2025-12-13 14:57:18] 2025-12-13 19:56:27,842 | INFO     | all job control threads have been joined
[2025-12-13 14:57:18] 2025-12-13 19:56:28,032 | INFO     | all data control threads have been joined
[2025-12-13 14:57:18] 2025-12-13 19:56:28,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:57:18] 2025-12-13 19:56:28,744 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:28,744 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:28,745 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:28,841 | INFO     | all payload control threads have been joined
[2025-12-13 14:57:18] 2025-12-13 19:56:28,848 | INFO     | [job] control thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:28,893 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,037 | INFO     | [data] control thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,114 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,119 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,135 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,277 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,587 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,713 | INFO     | [job] validate thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,846 | INFO     | [payload] control thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:29,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:30,419 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:31,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:57:18] 2025-12-13 19:56:35,170 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:57:18] 2025-12-13 19:56:57,884 | INFO     | PID=1401 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 14:57:18] 2025-12-13 19:56:57,884 | INFO     | .. there are 3 such processes running
[2025-12-13 14:57:18] 2025-12-13 19:56:57,885 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:57:18] 2025-12-13 19:56:57,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:57:18] 2025-12-13 19:56:57,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:57:18] 2025-12-13 19:57:12,198 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:57:18] 2025-12-13 19:57:13,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903477065536)>', '<ExcThread(monitor, started 139902914127616)>']
[2025-12-13 14:57:18] 2025-12-13 19:57:13,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:57:18] 2025-12-13 19:57:13,960 | INFO     | [monitor] control thread has ended
[2025-12-13 14:57:18] 2025-12-13 19:57:18,614 | INFO     | all workflow threads have been joined
[2025-12-13 14:57:18] 2025-12-13 19:57:18,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:57:18] 2025-12-13 19:57:18,615 | INFO     | traces error code: 0
[2025-12-13 14:57:18] 2025-12-13 19:57:18,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:57:18] 2025-12-13 19:57:18,715 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:57:18] 2025-12-13 19:57:18,718 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:57:18] 2025-12-13 19:57:18,720 [wrapper] pilotpid: 1401
[2025-12-13 14:57:18] 2025-12-13 19:57:18,723 [wrapper] Pilot exit status: 0
[2025-12-13 14:57:18] 2025-12-13 19:57:18,733 [wrapper] pandaids: 6929335069
[2025-12-13 14:57:18] 2025-12-13 19:57:18,776 [wrapper] cleanup supervisor_pilot  6699 1402
[2025-12-13 14:57:18] 2025-12-13 19:57:18,779 [wrapper] Test setup, not cleaning
[2025-12-13 14:57:18] 2025-12-13 19:57:18,781 [wrapper] apfmon messages muted
[2025-12-13 14:57:18] 2025-12-13 19:57:18,784 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:57:18] 2025-12-13 19:57:18,786 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:57:18]  *** Error codes and diagnostics ***
[2025-12-13 14:57:18]     "exeErrorCode": 0,
[2025-12-13 14:57:18]     "exeErrorDiag": "",
[2025-12-13 14:57:18]     "pilotErrorCode": 0,
[2025-12-13 14:57:18]     "pilotErrorDiag": "",
[2025-12-13 14:57:18]  *** Listing of results directory ***
[2025-12-13 14:57:18] total 372312
[2025-12-13 14:57:18] -rwx------ 1 boincer umatlas     36322 Dec 13 06:39 runpilot2-wrapper.sh
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:43 queuedata.json
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:43 pilot3.tar.gz
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas       100 Dec 13 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:57:18] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 12:01 run_atlas
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas       105 Dec 13 12:01 job.xml
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas 195415202 Dec 13 12:01 EVNT.47899040._000005.pool.root.1
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:01 start_atlas.sh
[2025-12-13 14:57:18] drwxrwx--x 2 boincer umatlas      4096 Dec 13 12:01 shared
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 12:01 input.tar.gz
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas         0 Dec 13 12:01 boinc_lockfile
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas      2498 Dec 13 12:01 pandaJob.out
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas        57 Dec 13 12:01 setup.sh.local
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas    991728 Dec 13 12:01 agis_schedconf.cvmfs.json
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas   1516240 Dec 13 12:01 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:57:18] drwx------ 5 boincer umatlas      4096 Dec 13 12:01 pilot3
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 14:55 init_data.xml
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas 178156778 Dec 13 14:55 HITS.47899042._000109.pool.root.1
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas      1050 Dec 13 14:56 memory_monitor_summary.json
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas       531 Dec 13 14:56 boinc_task_state.xml
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas    405781 Dec 13 14:56 log.47899042._000109.job.log.tgz.1
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas      7844 Dec 13 14:56 heartbeat.json
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas        95 Dec 13 14:56 pilot_heartbeat.json
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 14:57 boinc_mmap_file
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas        28 Dec 13 14:57 wrapper_checkpoint.txt
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas      4820 Dec 13 14:57 pilotlog.txt
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas   1471303 Dec 13 14:57 log.47899042._000109.job.log.1
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas       357 Dec 13 14:57 output.list
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas       620 Dec 13 14:57 runtime_log
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas   1894400 Dec 13 14:57 result.tar.gz
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 14:57 runtime_log.err
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas       662 Dec 13 14:57 aM2MDmw8co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaHPKDm3iBi2m.diag
[2025-12-13 14:57:18] -rw-r--r-- 1 boincer umatlas     21326 Dec 13 14:57 stderr.txt
[2025-12-13 14:57:18] HITS file was successfully produced:
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas 178156778 Dec 13 14:55 shared/HITS.pool.root.1
[2025-12-13 14:57:18]  *** Contents of shared directory: ***
[2025-12-13 14:57:18] total 367272
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas 195415202 Dec 13 12:01 ATLAS.root_0
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 12:01 start_atlas.sh
[2025-12-13 14:57:18] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 12:01 input.tar.gz
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas 178156778 Dec 13 14:55 HITS.pool.root.1
[2025-12-13 14:57:18] -rw------- 1 boincer umatlas   1894400 Dec 13 14:57 result.tar.gz
14:57:19 (30151): run_atlas exited; CPU time 79533.631517
14:57:19 (30151): called boinc_finish(0)

</stderr_txt>
]]>

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