Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:02 (797): wrapper (7.7.26015): starting
11:28:02 (797): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 11:28:02] Arguments: --nthreads 8
[2025-12-13 11:28:02] Threads: 8
[2025-12-13 11:28:02] Checking for CVMFS
[2025-12-13 11:28:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 11:28:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 11:28:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 11:28:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 11:28:03] 2.11.2.0 2895 98019 96060 153967 0 1 14184437 20275201 1 130560 0 28502217 99.850 6547266 33172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 11:28:03] CVMFS is ok
[2025-12-13 11:28:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 11:28:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 11:28:03] Further information can be found at the LHC@home message board.
[2025-12-13 11:28:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 11:28:03] Checking for apptainer binary...
[2025-12-13 11:28:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 11:28:03] Running /usr/bin/apptainer --version
[2025-12-13 11:28:03] apptainer version 1.3.2-1.el7
[2025-12-13 11:28:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 11:28:05] c-204-7.aglt2.org
[2025-12-13 11:28:05] apptainer works
[2025-12-13 11:28:05] Set ATHENA_PROC_NUMBER=8
[2025-12-13 11:28:05] Set ATHENA_CORE_NUMBER=8
[2025-12-13 11:28:05] Starting ATLAS job with PandaID=6929302216
[2025-12-13 11:28:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:41:49]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:41:49] 2025-12-13 19:40:57,047 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 14:41:49] 2025-12-13 19:40:58,109 | INFO     | time since job start (11554s) is within the limit (174528.0s)
[2025-12-13 14:41:49] 2025-12-13 19:40:58,867 | INFO     | monitor loop #845: job 0:6929302216 is in state 'finished'
[2025-12-13 14:41:49] 2025-12-13 19:40:58,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 14:41:49] 2025-12-13 19:40:59,247 | INFO     | PID=5006 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 14:41:49] 2025-12-13 19:41:00,248 | INFO     | time since job start (11556s) is within the limit (174528.0s)
[2025-12-13 14:41:49] 2025-12-13 19:41:01,370 | INFO     | monitor loop #846: job 0:6929302216 is in state 'finished'
[2025-12-13 14:41:49] 2025-12-13 19:41:01,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,252 | INFO     | time since job start (11558s) is within the limit (174528.0s)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,609 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 14:41:49] 2025-12-13 19:41:02,612 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1596.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,614 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929302216/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,615 | INFO     | extracted standard info from prmon json
[2025-12-13 14:41:49] 2025-12-13 19:41:02,616 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 14:41:49] 2025-12-13 19:41:02,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:41:49] 2025-12-13 19:41:02,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 14:41:49] 2025-12-13 19:41:02,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:41:49] 2025-12-13 19:41:02,623 | INFO     | fitting pss+swap vs Time
[2025-12-13 14:41:49] 2025-12-13 19:41:02,623 | INFO     | sum of square deviations: 2093397390.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,625 | INFO     | sum of deviations: -14139005352.999996
[2025-12-13 14:41:49] 2025-12-13 19:41:02,625 | INFO     | mean x: 1765649070.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,625 | INFO     | mean y: 2540113.82010582
[2025-12-13 14:41:49] 2025-12-13 19:41:02,625 | INFO     | intersect: 11927902097.886335
[2025-12-13 14:41:49] 2025-12-13 19:41:02,626 | INFO     | chi2: 1.6845815959696875
[2025-12-13 14:41:49] 2025-12-13 19:41:02,627 | INFO     | sum of square deviations: 1931608310.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,628 | INFO     | sum of deviations: -13618519223.499996
[2025-12-13 14:41:49] 2025-12-13 19:41:02,628 | INFO     | mean x: 1765648917.5
[2025-12-13 14:41:49] 2025-12-13 19:41:02,628 | INFO     | mean y: 2540604.538043478
[2025-12-13 14:41:49] 2025-12-13 19:41:02,629 | INFO     | intersect: 12450987632.04421
[2025-12-13 14:41:49] 2025-12-13 19:41:02,629 | INFO     | chi2: 1.6828955514148334
[2025-12-13 14:41:49] 2025-12-13 19:41:02,629 | INFO     | current chi2=1.6828955514148334 (change=0.10008684405005477 %)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,630 | INFO     | right removable region: 183
[2025-12-13 14:41:49] 2025-12-13 19:41:02,630 | INFO     | sum of square deviations: 1931608310.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,632 | INFO     | sum of deviations: -43188936197.49999
[2025-12-13 14:41:49] 2025-12-13 19:41:02,632 | INFO     | mean x: 1765649222.5
[2025-12-13 14:41:49] 2025-12-13 19:41:02,632 | INFO     | mean y: 2567165.309782609
[2025-12-13 14:41:49] 2025-12-13 19:41:02,632 | INFO     | intersect: 39480815018.632576
[2025-12-13 14:41:49] 2025-12-13 19:41:02,633 | INFO     | chi2: 0.19440041258303123
[2025-12-13 14:41:49] 2025-12-13 19:41:02,633 | INFO     | current chi2=0.19440041258303123 (change=88.46001802179671 %)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,633 | INFO     | sum of square deviations: 1778377530.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,635 | INFO     | sum of deviations: -42368839906.00001
[2025-12-13 14:41:49] 2025-12-13 19:41:02,635 | INFO     | mean x: 1765649375.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,635 | INFO     | mean y: 2566292.407821229
[2025-12-13 14:41:49] 2025-12-13 19:41:02,635 | INFO     | intersect: 42068165096.67519
[2025-12-13 14:41:49] 2025-12-13 19:41:02,636 | INFO     | chi2: 0.17265297549174663
[2025-12-13 14:41:49] 2025-12-13 19:41:02,636 | INFO     | current chi2=0.17265297549174663 (change=11.186929493781786 %)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,636 | INFO     | left removable region: 20
[2025-12-13 14:41:49] 2025-12-13 19:41:02,637 | INFO     | sum of square deviations: 1342841922.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,638 | INFO     | sum of deviations: -30683431574.999996
[2025-12-13 14:41:49] 2025-12-13 19:41:02,638 | INFO     | mean x: 1765649497.0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,638 | INFO     | mean y: 2555915.993865031
[2025-12-13 14:41:49] 2025-12-13 19:41:02,639 | INFO     | intersect: 40346981152.54279
[2025-12-13 14:41:49] 2025-12-13 19:41:02,639 | INFO     | chi2: 0.15772785636249437
[2025-12-13 14:41:49] 2025-12-13 19:41:02,639 | INFO     | current memory leak: -22.85 B/s (using 163 data points, chi2=0.16)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,640 | INFO     | could have reported an average CPU frequency of 2015 MHz (10 samples)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,640 | INFO     | ..............................
[2025-12-13 14:41:49] 2025-12-13 19:41:02,640 | INFO     | . Timing measurements:
[2025-12-13 14:41:49] 2025-12-13 19:41:02,640 | INFO     | . get job = 0 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,640 | INFO     | . initial setup = 2 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | . payload setup = 8 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | . stage-in = 0 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | . payload execution = 11518 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | . stage-out = 2 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | . log creation = 0 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,641 | INFO     | ..............................
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | 
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | job summary report
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | --------------------------------------------------
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | PanDA job id: 6929302216
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | task id: 47898763
[2025-12-13 14:41:49] 2025-12-13 19:41:02,755 | INFO     | errors: (none)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | pilot state: finished 
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | transexitcode: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | exeerrorcode: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | exeerrordiag: 
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | exitcode: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,756 | INFO     | exitmsg: OK
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | cpuconsumptiontime: 84593 s
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | nevents: 400
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | neventsw: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | pid: 11452
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | pgrp: 11452
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | corecount: 8
[2025-12-13 14:41:49] 2025-12-13 19:41:02,757 | INFO     | event service: False
[2025-12-13 14:41:49] 2025-12-13 19:41:02,758 | INFO     | sizes: {0: 2283953, 6: 2284215, 11: 2284243, 11530: 2313608, 11532: 2322606, 11533: 2322662, 11541: 2322984}
[2025-12-13 14:41:49] 2025-12-13 19:41:02,758 | INFO     | --------------------------------------------------
[2025-12-13 14:41:49] 2025-12-13 19:41:02,758 | INFO     | 
[2025-12-13 14:41:49] 2025-12-13 19:41:02,758 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 14:41:49] 2025-12-13 19:41:02,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:41:49] 2025-12-13 19:41:02,791 | INFO     | job 6929302216 has completed (purged errors)
[2025-12-13 14:41:49] 2025-12-13 19:41:02,791 | INFO     | overall cleanup function is called
[2025-12-13 14:41:49] 2025-12-13 19:41:03,798 | INFO     | --- collectZombieJob: --- 10, [11452]
[2025-12-13 14:41:49] 2025-12-13 19:41:03,799 | INFO     | zombie collector waiting for pid 11452
[2025-12-13 14:41:49] 2025-12-13 19:41:03,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:41:49] 2025-12-13 19:41:03,799 | INFO     | collected zombie processes
[2025-12-13 14:41:49] 2025-12-13 19:41:03,799 | INFO     | will attempt to kill all subprocesses of pid=11452
[2025-12-13 14:41:49] 2025-12-13 19:41:03,895 | INFO     | process IDs to be killed: [11452] (in reverse order)
[2025-12-13 14:41:49] 2025-12-13 19:41:03,943 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:41:49] 2025-12-13 19:41:03,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:41:49] 2025-12-13 19:41:03,947 | INFO     | did not find any defunct processes belonging to 11452
[2025-12-13 14:41:49] 2025-12-13 19:41:03,950 | INFO     | did not find any defunct processes belonging to 11452
[2025-12-13 14:41:49] 2025-12-13 19:41:03,950 | INFO     | ready for new job
[2025-12-13 14:41:49] 2025-12-13 19:41:03,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:41:49] 2025-12-13 19:41:03,952 | INFO     | ***************************************
[2025-12-13 14:41:49] 2025-12-13 19:41:03,953 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:41:49] 2025-12-13 19:41:03,953 | INFO     | ***************************************
[2025-12-13 14:41:49] 2025-12-13 19:41:03,953 | INFO     | 
[2025-12-13 14:41:49] 2025-12-13 19:41:03,953 | INFO     | architecture information:
[2025-12-13 14:41:49] 2025-12-13 19:41:03,954 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:41:49] 2025-12-13 19:41:03,971 | INFO     | cat /etc/os-release:
[2025-12-13 14:41:49] NAME="CentOS Linux"
[2025-12-13 14:41:49] VERSION="7 (Core)"
[2025-12-13 14:41:49] ID="centos"
[2025-12-13 14:41:49] ID_LIKE="rhel fedora"
[2025-12-13 14:41:49] VERSION_ID="7"
[2025-12-13 14:41:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:41:49] ANSI_COLOR="0;31"
[2025-12-13 14:41:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:41:49] HOME_URL="https://www.centos.org/"
[2025-12-13 14:41:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:41:49] 
[2025-12-13 14:41:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:41:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:41:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:41:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:41:49] 
[2025-12-13 14:41:49] 2025-12-13 19:41:03,972 | INFO     | ***************************************
[2025-12-13 14:41:49] 2025-12-13 19:41:04,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 14:41:49] 2025-12-13 19:41:04,493 | INFO     | sufficient remaining disk space (18545115136 B)
[2025-12-13 14:41:49] 2025-12-13 19:41:04,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:41:49] 2025-12-13 19:41:04,494 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:41:49] 2025-12-13 19:41:04,494 | INFO     | update_server=False
[2025-12-13 14:41:49] 2025-12-13 19:41:04,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:41:49] 2025-12-13 19:41:04,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:41:49] 2025-12-13 19:41:04,571 | INFO     | all job control threads have been joined
[2025-12-13 14:41:49] 2025-12-13 19:41:04,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:41:49] 2025-12-13 19:41:04,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:41:49] 2025-12-13 19:41:04,881 | INFO     | aborting loop
[2025-12-13 14:41:49] 2025-12-13 19:41:04,909 | INFO     | all data control threads have been joined
[2025-12-13 14:41:49] 2025-12-13 19:41:05,412 | INFO     | all payload control threads have been joined
[2025-12-13 14:41:49] 2025-12-13 19:41:05,500 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:05,500 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:05,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:41:49] 2025-12-13 19:41:05,577 | INFO     | [job] control thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:05,618 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:05,887 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:05,914 | INFO     | [data] control thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,222 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,280 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,417 | INFO     | [payload] control thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,748 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,779 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,813 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:06,824 | INFO     | [job] validate thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:07,056 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:09,574 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:15,422 | INFO     | job.realtimelogging is not enabled
[2025-12-13 14:41:49] 2025-12-13 19:41:16,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:41:49] 2025-12-13 19:41:35,495 | INFO     | PID=5006 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 14:41:49] 2025-12-13 19:41:35,496 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:41:49] 2025-12-13 19:41:35,496 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:41:49] 2025-12-13 19:41:35,496 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:41:49] 2025-12-13 19:41:43,215 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:41:49] 2025-12-13 19:41:43,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398988339008)>', '<ExcThread(monitor, started 140398093649664)>']
[2025-12-13 14:41:49] 2025-12-13 19:41:44,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:41:49] 2025-12-13 19:41:44,544 | INFO     | [monitor] control thread has ended
[2025-12-13 14:41:49] 2025-12-13 19:41:48,856 | INFO     | all workflow threads have been joined
[2025-12-13 14:41:49] 2025-12-13 19:41:48,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:41:49] 2025-12-13 19:41:48,857 | INFO     | traces error code: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:48,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:41:49] 2025-12-13 19:41:48,998 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:41:49] 2025-12-13 19:41:49,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:41:49] 2025-12-13 19:41:49,008 [wrapper] pilotpid: 5006
[2025-12-13 14:41:49] 2025-12-13 19:41:49,012 [wrapper] Pilot exit status: 0
[2025-12-13 14:41:49] 2025-12-13 19:41:49,032 [wrapper] pandaids: 6929302216
[2025-12-13 14:41:49] 2025-12-13 19:41:49,085 [wrapper] cleanup supervisor_pilot 14204 5007
[2025-12-13 14:41:49] 2025-12-13 19:41:49,090 [wrapper] Test setup, not cleaning
[2025-12-13 14:41:49] 2025-12-13 19:41:49,096 [wrapper] apfmon messages muted
[2025-12-13 14:41:49] 2025-12-13 19:41:49,101 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:41:49] 2025-12-13 19:41:49,105 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:41:49]  *** Error codes and diagnostics ***
[2025-12-13 14:41:49]     "exeErrorCode": 0,
[2025-12-13 14:41:49]     "exeErrorDiag": "",
[2025-12-13 14:41:49]     "pilotErrorCode": 0,
[2025-12-13 14:41:49]     "pilotErrorDiag": "",
[2025-12-13 14:41:49]  *** Listing of results directory ***
[2025-12-13 14:41:49] total 442684
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 14:41:49] -rwx------ 1 boincer umatlas     36322 Dec 13 06:37 runpilot2-wrapper.sh
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:38 queuedata.json
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas       100 Dec 13 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:41:49] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 11:28 run_atlas
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas       105 Dec 13 11:28 job.xml
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas 221156393 Dec 13 11:28 EVNT.47898761._000246.pool.root.1
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 11:28 start_atlas.sh
[2025-12-13 14:41:49] drwxrwx--x 2 boincer umatlas      4096 Dec 13 11:28 shared
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 11:28 input.tar.gz
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas         0 Dec 13 11:28 boinc_lockfile
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas      2505 Dec 13 11:28 pandaJob.out
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas        57 Dec 13 11:28 setup.sh.local
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas    991728 Dec 13 11:28 agis_schedconf.cvmfs.json
[2025-12-13 14:41:49] drwx------ 5 boincer umatlas      4096 Dec 13 11:28 pilot3
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 14:39 init_data.xml
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas 224209024 Dec 13 14:40 HITS.47898763._004256.pool.root.1
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas       530 Dec 13 14:40 boinc_task_state.xml
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas      1062 Dec 13 14:40 memory_monitor_summary.json
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas   1516240 Dec 13 14:40 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas    416413 Dec 13 14:40 log.47898763._004256.job.log.tgz.1
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas      7863 Dec 13 14:41 heartbeat.json
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas        28 Dec 13 14:41 wrapper_checkpoint.txt
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 14:41 boinc_mmap_file
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas        95 Dec 13 14:41 pilot_heartbeat.json
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas      4817 Dec 13 14:41 pilotlog.txt
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas   1595755 Dec 13 14:41 log.47898763._004256.job.log.1
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas       357 Dec 13 14:41 output.list
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas       620 Dec 13 14:41 runtime_log
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas   2027520 Dec 13 14:41 result.tar.gz
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas       662 Dec 13 14:41 TaUNDm46co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwHTKDmlR3h2n.diag
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 14:41 runtime_log.err
[2025-12-13 14:41:49] -rw-r--r-- 1 boincer umatlas     21476 Dec 13 14:41 stderr.txt
[2025-12-13 14:41:49] HITS file was successfully produced:
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas 224209024 Dec 13 14:40 shared/HITS.pool.root.1
[2025-12-13 14:41:49]  *** Contents of shared directory: ***
[2025-12-13 14:41:49] total 437516
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas 221156393 Dec 13 11:28 ATLAS.root_0
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 11:28 start_atlas.sh
[2025-12-13 14:41:49] -rw-r--r-- 2 boincer umatlas    592400 Dec 13 11:28 input.tar.gz
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas 224209024 Dec 13 14:40 HITS.pool.root.1
[2025-12-13 14:41:49] -rw------- 1 boincer umatlas   2027520 Dec 13 14:41 result.tar.gz
14:41:51 (797): run_atlas exited; CPU time 84504.628275
14:41:51 (797): called boinc_finish(0)

</stderr_txt>
]]>

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