Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:25:04 (966012): wrapper (7.7.26015): starting
08:25:04 (966012): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 08:25:04] Arguments: --nthreads 12
[2025-12-13 08:25:04] Threads: 12
[2025-12-13 08:25:04] Checking for CVMFS
[2025-12-13 08:25:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 08:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 08:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 08:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 08:25:05] 2.11.5.0 709636 17923 361796 153967 1 196 39826523 45568001 11971 130560 0 110779505 99.776 77107726 23345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 08:25:05] CVMFS is ok
[2025-12-13 08:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 08:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 08:25:05] Further information can be found at the LHC@home message board.
[2025-12-13 08:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 08:25:05] Checking for apptainer binary...
[2025-12-13 08:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 08:25:05] Running /usr/bin/apptainer --version
[2025-12-13 08:25:05] apptainer version 1.4.1-1.el9
[2025-12-13 08:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 08:25:06] wns0033.triumf.lcg
[2025-12-13 08:25:06] apptainer works
[2025-12-13 08:25:06] Set ATHENA_PROC_NUMBER=12
[2025-12-13 08:25:06] Set ATHENA_CORE_NUMBER=12
[2025-12-13 08:25:06] Starting ATLAS job with PandaID=6929302099
[2025-12-13 08:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 08:30:38]  *** The last 200 lines of the pilot log: ***
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | WARNING  | wrong length of table data, x=[1765643228.0], y=[1982.0] (must be same and length>=4)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . Timing measurements:
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . get job = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . initial setup = 3 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload setup = 26 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . stage-in = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload execution = 41 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . stage-out = 1 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . log creation = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302099/pilotlog.txt
[2025-12-13 08:30:38] 2025-12-13 16:29:55,792 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 08:30:38] - Log from pilotlog.txt -
[2025-12-13 08:30:38] 2025-12-13 16:29:55,764 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929302099/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | INFO     | extracted standard info from prmon json
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | WARNING  | wrong length of table data, x=[1765643228.0], y=[1982.0] (must be same and length>=4)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . Timing measurements:
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . get job = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . initial setup = 3 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload setup = 26 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . stage-in = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload execution = 41 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . stage-out = 1 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . log creation = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302099/pilotlog.txt
[2025-12-13 08:30:38] 2025-12-13 16:29:55,793 | WARNING  | 
[2025-12-13 08:30:38] [begin log extracts]
[2025-12-13 08:30:38] - Log from pilotlog.txt -
[2025-12-13 08:30:38] 2025-12-13 16:29:55,764 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929302099/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | INFO     | extracted standard info from prmon json
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 08:30:38] 2025-12-13 16:29:55,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | WARNING  | wrong length of table data, x=[1765643228.0], y=[1982.0] (must be same and length>=4)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . Timing measurements:
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . get job = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . initial setup = 3 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload setup = 26 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . stage-in = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,766 | INFO     | . payload execution = 41 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . stage-out = 1 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | . log creation = 0 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | ..............................
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 08:30:38] 2025-12-13 16:29:55,767 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929302099/pilotlog.txt
[2025-12-13 08:30:38] [end log extracts]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,793 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,794 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 08:30:38] 2025-12-13 16:29:55,875 | INFO     | 
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | job summary report
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | --------------------------------------------------
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | PanDA job id: 6929302099
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | task id: 47898763
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 08:27:26,575 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | pilot state: failed 
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | transexitcode: 65
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | exeerrorcode: 65
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | exitcode: 65
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | nevents: 0
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | neventsw: 0
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | pid: 976663
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | pgrp: 976663
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | corecount: 12
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | event service: False
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | sizes: {0: 2283779, 1: 2283779, 2: 2284006, 3: 2284006, 14: 2284034, 15: 2284324, 25: 2284480, 72: 2307697, 73: 2307673, 74: 2312021, 212: 2312159}
[2025-12-13 08:30:38] 2025-12-13 16:29:55,876 | INFO     | --------------------------------------------------
[2025-12-13 08:30:38] 2025-12-13 16:29:55,877 | INFO     | 
[2025-12-13 08:30:38] 2025-12-13 16:29:55,877 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 08:30:38] 2025-12-13 16:29:55,891 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 08:30:38] 2025-12-13 16:29:55,893 | INFO     | job 6929302099 has completed (purged errors)
[2025-12-13 08:30:38] 2025-12-13 16:29:55,893 | INFO     | overall cleanup function is called
[2025-12-13 08:30:38] 2025-12-13 16:29:56,900 | INFO     | --- collectZombieJob: --- 10, [976663]
[2025-12-13 08:30:38] 2025-12-13 16:29:56,900 | INFO     | zombie collector waiting for pid 976663
[2025-12-13 08:30:38] 2025-12-13 16:29:56,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 08:30:38] 2025-12-13 16:29:56,901 | INFO     | collected zombie processes
[2025-12-13 08:30:38] 2025-12-13 16:29:56,901 | INFO     | will attempt to kill all subprocesses of pid=976663
[2025-12-13 08:30:38] 2025-12-13 16:29:58,249 | INFO     | process IDs to be killed: [976663] (in reverse order)
[2025-12-13 08:30:38] 2025-12-13 16:29:58,493 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 08:30:38] 2025-12-13 16:29:58,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 08:30:38] 2025-12-13 16:29:58,538 | INFO     | did not find any defunct processes belonging to 976663
[2025-12-13 08:30:38] 2025-12-13 16:29:58,603 | INFO     | did not find any defunct processes belonging to 976663
[2025-12-13 08:30:38] 2025-12-13 16:29:58,604 | INFO     | ready for new job
[2025-12-13 08:30:38] 2025-12-13 16:29:58,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 08:30:38] 2025-12-13 16:29:58,606 | INFO     | ***************************************
[2025-12-13 08:30:38] 2025-12-13 16:29:58,606 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 08:30:38] 2025-12-13 16:29:58,606 | INFO     | ***************************************
[2025-12-13 08:30:38] 2025-12-13 16:29:58,606 | INFO     | 
[2025-12-13 08:30:38] 2025-12-13 16:29:58,633 | INFO     | architecture information:
[2025-12-13 08:30:38] 2025-12-13 16:29:58,637 | INFO     | executing command: cat /etc/os-release
[2025-12-13 08:30:38] 2025-12-13 16:29:58,754 | INFO     | cat /etc/os-release:
[2025-12-13 08:30:38] NAME="CentOS Linux"
[2025-12-13 08:30:38] VERSION="7 (Core)"
[2025-12-13 08:30:38] ID="centos"
[2025-12-13 08:30:38] ID_LIKE="rhel fedora"
[2025-12-13 08:30:38] VERSION_ID="7"
[2025-12-13 08:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 08:30:38] ANSI_COLOR="0;31"
[2025-12-13 08:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 08:30:38] HOME_URL="https://www.centos.org/"
[2025-12-13 08:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 08:30:38] 
[2025-12-13 08:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 08:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 08:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 08:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 08:30:38] 
[2025-12-13 08:30:38] 2025-12-13 16:29:58,755 | INFO     | ***************************************
[2025-12-13 08:30:38] 2025-12-13 16:29:59,263 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | INFO     | sufficient remaining disk space (2179865772032 B)
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | INFO     | update_server=False
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 08:30:38] 2025-12-13 16:29:59,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 08:30:38] 2025-12-13 16:29:59,464 | INFO     | all job control threads have been joined
[2025-12-13 08:30:38] 2025-12-13 16:29:59,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:30:38] 2025-12-13 16:29:59,749 | INFO     | aborting loop
[2025-12-13 08:30:38] 2025-12-13 16:29:59,781 | INFO     | all payload control threads have been joined
[2025-12-13 08:30:38] 2025-12-13 16:29:59,947 | INFO     | all data control threads have been joined
[2025-12-13 08:30:38] 2025-12-13 16:29:59,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 08:30:38] 2025-12-13 16:30:00,366 | INFO     | [job] retrieve thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,471 | INFO     | [job] control thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,572 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,605 | INFO     | [data] copytool_in thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,640 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,748 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,755 | INFO     | [job] job monitor thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,788 | INFO     | [payload] control thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:00,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:30:38] 2025-12-13 16:30:00,953 | INFO     | [data] control thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,087 | INFO     | [payload] failed_post thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,088 | INFO     | [payload] validate_post thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,368 | INFO     | [data] copytool_out thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,477 | INFO     | [job] validate thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:01,915 | INFO     | [job] queue monitor thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:03,969 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 08:30:38] 2025-12-13 16:30:28,793 | INFO     | PID=969810 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 08:30:38] 2025-12-13 16:30:28,793 | INFO     | .. there are 42 such processes running
[2025-12-13 08:30:38] 2025-12-13 16:30:28,793 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 08:30:38] 2025-12-13 16:30:28,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 08:30:38] 2025-12-13 16:30:28,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 08:30:38] 2025-12-13 16:30:32,790 | INFO     | [monitor] cgroup control has ended
[2025-12-13 08:30:38] 2025-12-13 16:30:33,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923108468544)>', '<ExcThread(monitor, started 139922577024768)>']
[2025-12-13 08:30:38] 2025-12-13 16:30:33,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 08:30:38] 2025-12-13 16:30:33,824 | INFO     | [monitor] control thread has ended
[2025-12-13 08:30:38] 2025-12-13 16:30:38,478 | INFO     | all workflow threads have been joined
[2025-12-13 08:30:38] 2025-12-13 16:30:38,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 08:30:38] 2025-12-13 16:30:38,479 | INFO     | traces error code: 0
[2025-12-13 08:30:38] 2025-12-13 16:30:38,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 08:30:38] 2025-12-13 16:30:38,853 [wrapper] ==== pilot stdout END ====
[2025-12-13 08:30:38] 2025-12-13 16:30:38,855 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 08:30:38] 2025-12-13 16:30:38,857 [wrapper] pilotpid: 969810
[2025-12-13 08:30:38] 2025-12-13 16:30:38,859 [wrapper] Pilot exit status: 0
[2025-12-13 08:30:38] 2025-12-13 16:30:38,867 [wrapper] pandaids: 6929302099
[2025-12-13 08:30:38] 2025-12-13 16:30:38,919 [wrapper] cleanup supervisor_pilot  969816 969811
[2025-12-13 08:30:38] 2025-12-13 16:30:38,921 [wrapper] Test setup, not cleaning
[2025-12-13 08:30:38] 2025-12-13 16:30:38,923 [wrapper] apfmon messages muted
[2025-12-13 08:30:38] 2025-12-13 16:30:38,924 [wrapper] ==== wrapper stdout END ====
[2025-12-13 08:30:38] 2025-12-13 16:30:38,926 [wrapper] ==== wrapper stderr END ====
[2025-12-13 08:30:38]  *** Error codes and diagnostics ***
[2025-12-13 08:30:38]     "exeErrorCode": 65,
[2025-12-13 08:30:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 08:30:38]     "pilotErrorCode": 1305,
[2025-12-13 08:30:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 08:30:38]  *** Listing of results directory ***
[2025-12-13 08:30:38] total 223260
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:35 pilot3.tar.gz
[2025-12-13 08:30:38] -rwx------. 1 boinc boinc     36322 Dec 13 03:37 runpilot2-wrapper.sh
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:38 queuedata.json
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc       100 Dec 13 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 08:30:38] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 08:25 run_atlas
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc       105 Dec 13 08:25 job.xml
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc      6595 Dec 13 08:25 init_data.xml
[2025-12-13 08:30:38] -rw-r--r--. 2 boinc boinc 224469951 Dec 13 08:25 EVNT.47898761._000241.pool.root.1
[2025-12-13 08:30:38] -rw-r--r--. 2 boinc boinc     15847 Dec 13 08:25 start_atlas.sh
[2025-12-13 08:30:38] drwxrwx--x. 2 boinc boinc      4096 Dec 13 08:25 shared
[2025-12-13 08:30:38] -rw-r--r--. 2 boinc boinc    592399 Dec 13 08:25 input.tar.gz
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc         0 Dec 13 08:25 boinc_lockfile
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc      2505 Dec 13 08:25 pandaJob.out
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc    991728 Dec 13 08:25 agis_schedconf.cvmfs.json
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc   1516240 Dec 13 08:25 agis_ddmendpoints.agis.ALL.json
[2025-12-13 08:30:38] drwx------. 5 boinc boinc      4096 Dec 13 08:25 pilot3
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc       961 Dec 13 08:27 memory_monitor_summary.json
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc     22151 Dec 13 08:27 log.47898763._004139.job.log.tgz.1
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc        95 Dec 13 08:29 pilot_heartbeat.json
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc      8393 Dec 13 08:29 heartbeat.json
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc       523 Dec 13 08:30 boinc_task_state.xml
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc        22 Dec 13 08:30 wrapper_checkpoint.txt
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc      8192 Dec 13 08:30 boinc_mmap_file
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc      4822 Dec 13 08:30 pilotlog.txt
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc     92871 Dec 13 08:30 log.47898763._004139.job.log.1
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc       188 Dec 13 08:30 output.list
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc       620 Dec 13 08:30 runtime_log
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc    133120 Dec 13 08:30 result.tar.gz
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc      8636 Dec 13 08:30 runtime_log.err
[2025-12-13 08:30:38] -rw-------. 1 boinc boinc       643 Dec 13 08:30 AgWLDm26co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmC9OKDmXWkVon.diag
[2025-12-13 08:30:38] -rw-r--r--. 1 boinc boinc     21817 Dec 13 08:30 stderr.txt
[2025-12-13 08:30:39] No HITS result produced
[2025-12-13 08:30:39]  *** Contents of shared directory: ***
[2025-12-13 08:30:39] total 219944
[2025-12-13 08:30:39] -rw-r--r--. 2 boinc boinc 224469951 Dec 13 08:25 ATLAS.root_0
[2025-12-13 08:30:39] -rw-r--r--. 2 boinc boinc     15847 Dec 13 08:25 start_atlas.sh
[2025-12-13 08:30:39] -rw-r--r--. 2 boinc boinc    592399 Dec 13 08:25 input.tar.gz
[2025-12-13 08:30:39] -rw-------. 1 boinc boinc    133120 Dec 13 08:30 result.tar.gz
08:30:40 (966012): run_atlas exited; CPU time 27.244815
08:30:40 (966012): called boinc_finish(0)

</stderr_txt>
]]>

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