Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:59:59 (8213): wrapper (7.7.26015): starting
10:59:59 (8213): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 10:59:59] Arguments: --nthreads 12
[2025-12-13 10:59:59] Threads: 12
[2025-12-13 10:59:59] Checking for CVMFS
[2025-12-13 10:59:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 10:59:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 10:59:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 10:59:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 10:59:59] 2.11.2.0 2925 312374 97412 153965 3 59 15552310 20275200 1 130560 1 138000062 99.966 18162428 15163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 10:59:59] CVMFS is ok
[2025-12-13 10:59:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 10:59:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 10:59:59] Further information can be found at the LHC@home message board.
[2025-12-13 10:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 10:59:59] Checking for apptainer binary...
[2025-12-13 10:59:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 10:59:59] Running /usr/bin/apptainer --version
[2025-12-13 10:59:59] apptainer version 1.3.2-1.el7
[2025-12-13 10:59:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 11:00:01] c-205-9.aglt2.org
[2025-12-13 11:00:01] apptainer works
[2025-12-13 11:00:01] Set ATHENA_PROC_NUMBER=12
[2025-12-13 11:00:01] Set ATHENA_CORE_NUMBER=12
[2025-12-13 11:00:01] Starting ATLAS job with PandaID=6929300803
[2025-12-13 11:00:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 12:42:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 12:42:32] 2025-12-13 17:41:53,565 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 12:42:32] 2025-12-13 17:41:53,569 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-13 12:42:32] 2025-12-13 17:41:53,570 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929300803/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,571 | INFO     | extracted standard info from prmon json
[2025-12-13 12:42:32] 2025-12-13 17:41:53,571 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 12:42:32] 2025-12-13 17:41:53,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 12:42:32] 2025-12-13 17:41:53,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 12:42:32] 2025-12-13 17:41:53,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 12:42:32] 2025-12-13 17:41:53,574 | INFO     | fitting pss+swap vs Time
[2025-12-13 12:42:32] 2025-12-13 17:41:53,574 | INFO     | sum of square deviations: 310052325.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,574 | INFO     | sum of deviations: 4096051729.000005
[2025-12-13 12:42:32] 2025-12-13 17:41:53,574 | INFO     | mean x: 1765644664.5
[2025-12-13 12:42:32] 2025-12-13 17:41:53,575 | INFO     | mean y: 2627942.9
[2025-12-13 12:42:32] 2025-12-13 17:41:53,575 | INFO     | intersect: -23323021625.523193
[2025-12-13 12:42:32] 2025-12-13 17:41:53,575 | INFO     | chi2: 2.1016763343006812
[2025-12-13 12:42:32] 2025-12-13 17:41:53,575 | INFO     | sum of square deviations: 265828240.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | sum of deviations: 10757711608.000002
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | mean x: 1765644512.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | mean y: 2649926.389473684
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | intersect: -71450610503.51782
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | chi2: 1.323878921528788
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | current chi2=1.323878921528788 (change=37.0084298936877 %)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,576 | INFO     | sum of square deviations: 226022842.5
[2025-12-13 12:42:32] 2025-12-13 17:41:53,577 | INFO     | sum of deviations: 10194736080.999998
[2025-12-13 12:42:32] 2025-12-13 17:41:53,577 | INFO     | mean x: 1765644359.5
[2025-12-13 12:42:32] 2025-12-13 17:41:53,577 | INFO     | mean y: 2647767.0222222223
[2025-12-13 12:42:32] 2025-12-13 17:41:53,577 | INFO     | intersect: -79636551788.69872
[2025-12-13 12:42:32] 2025-12-13 17:41:53,577 | INFO     | chi2: 1.3270356598059618
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | current chi2=1.3270356598059618 (change=-0.2384461468370869 %)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | right removable region: 89
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | sum of square deviations: 265828240.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | sum of deviations: -9859268350.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | mean x: 1765644817.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,578 | INFO     | mean y: 2674938.494736842
[2025-12-13 12:42:32] 2025-12-13 17:41:53,579 | INFO     | intersect: 65488441468.00131
[2025-12-13 12:42:32] 2025-12-13 17:41:53,579 | INFO     | chi2: 0.8717787893707721
[2025-12-13 12:42:32] 2025-12-13 17:41:53,579 | INFO     | current chi2=0.8717787893707721 (change=58.51983604026969 %)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,579 | INFO     | sum of square deviations: 226022842.5
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | sum of deviations: -8644381431.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | mean x: 1765644969.5
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | mean y: 2670018.533333333
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | intersect: 67530838495.94889
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | chi2: 0.8510467757287279
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | current chi2=0.8510467757287279 (change=2.3781277882440897 %)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,580 | INFO     | left removable region: 20
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | sum of square deviations: 101843770.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | sum of deviations: 433811992.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | mean x: 1765644939.0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | mean y: 2684721.0289855073
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | intersect: -7518226456.476604
[2025-12-13 12:42:32] 2025-12-13 17:41:53,581 | INFO     | chi2: 0.00014863774802319416
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | current memory leak: 4.26 B/s (using 69 data points, chi2=0.00)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | could have reported an average CPU frequency of 2133 MHz (7 samples)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | ..............................
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | . Timing measurements:
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | . get job = 0 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | . initial setup = 2 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | . payload setup = 7 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,582 | INFO     | . stage-in = 0 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,583 | INFO     | . payload execution = 6059 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,583 | INFO     | . stage-out = 0 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,583 | INFO     | . log creation = 0 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,583 | INFO     | ..............................
[2025-12-13 12:42:32] 2025-12-13 17:41:53,664 | INFO     | 
[2025-12-13 12:42:32] 2025-12-13 17:41:53,664 | INFO     | job summary report
[2025-12-13 12:42:32] 2025-12-13 17:41:53,664 | INFO     | --------------------------------------------------
[2025-12-13 12:42:32] 2025-12-13 17:41:53,664 | INFO     | PanDA job id: 6929300803
[2025-12-13 12:42:32] 2025-12-13 17:41:53,664 | INFO     | task id: 47898763
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | errors: (none)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | pilot state: finished 
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | transexitcode: 0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | exeerrorcode: 0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,665 | INFO     | exeerrordiag: 
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | exitcode: 0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | exitmsg: OK
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | cpuconsumptiontime: 65480 s
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | nevents: 400
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | neventsw: 0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | pid: 18488
[2025-12-13 12:42:32] 2025-12-13 17:41:53,666 | INFO     | pgrp: 18488
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | corecount: 12
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | event service: False
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | sizes: {0: 2283950, 5: 2284212, 11: 2284268, 6070: 2311043, 6072: 2320041, 6074: 2320097, 6081: 2320419}
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | --------------------------------------------------
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | 
[2025-12-13 12:42:32] 2025-12-13 17:41:53,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 12:42:32] 2025-12-13 17:41:53,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 12:42:32] 2025-12-13 17:41:53,696 | INFO     | job 6929300803 has completed (purged errors)
[2025-12-13 12:42:32] 2025-12-13 17:41:53,696 | INFO     | overall cleanup function is called
[2025-12-13 12:42:32] 2025-12-13 17:41:54,704 | INFO     | --- collectZombieJob: --- 10, [18488]
[2025-12-13 12:42:32] 2025-12-13 17:41:54,704 | INFO     | zombie collector waiting for pid 18488
[2025-12-13 12:42:32] 2025-12-13 17:41:54,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 12:42:32] 2025-12-13 17:41:54,705 | INFO     | collected zombie processes
[2025-12-13 12:42:32] 2025-12-13 17:41:54,705 | INFO     | will attempt to kill all subprocesses of pid=18488
[2025-12-13 12:42:32] 2025-12-13 17:41:54,796 | INFO     | process IDs to be killed: [18488] (in reverse order)
[2025-12-13 12:42:32] 2025-12-13 17:41:54,848 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 12:42:32] 2025-12-13 17:41:54,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 12:42:32] 2025-12-13 17:41:54,853 | INFO     | did not find any defunct processes belonging to 18488
[2025-12-13 12:42:32] 2025-12-13 17:41:54,856 | INFO     | did not find any defunct processes belonging to 18488
[2025-12-13 12:42:32] 2025-12-13 17:41:54,856 | INFO     | ready for new job
[2025-12-13 12:42:32] 2025-12-13 17:41:54,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 12:42:32] 2025-12-13 17:41:54,858 | INFO     | ***************************************
[2025-12-13 12:42:32] 2025-12-13 17:41:54,858 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 12:42:32] 2025-12-13 17:41:54,858 | INFO     | ***************************************
[2025-12-13 12:42:32] 2025-12-13 17:41:54,859 | INFO     | 
[2025-12-13 12:42:32] 2025-12-13 17:41:54,859 | INFO     | architecture information:
[2025-12-13 12:42:32] 2025-12-13 17:41:54,860 | INFO     | executing command: cat /etc/os-release
[2025-12-13 12:42:32] 2025-12-13 17:41:54,876 | INFO     | cat /etc/os-release:
[2025-12-13 12:42:32] NAME="CentOS Linux"
[2025-12-13 12:42:32] VERSION="7 (Core)"
[2025-12-13 12:42:32] ID="centos"
[2025-12-13 12:42:32] ID_LIKE="rhel fedora"
[2025-12-13 12:42:32] VERSION_ID="7"
[2025-12-13 12:42:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 12:42:32] ANSI_COLOR="0;31"
[2025-12-13 12:42:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 12:42:32] HOME_URL="https://www.centos.org/"
[2025-12-13 12:42:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 12:42:32] 
[2025-12-13 12:42:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 12:42:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 12:42:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 12:42:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 12:42:32] 
[2025-12-13 12:42:32] 2025-12-13 17:41:54,876 | INFO     | ***************************************
[2025-12-13 12:42:32] 2025-12-13 17:41:55,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 12:42:32] 2025-12-13 17:41:55,396 | INFO     | sufficient remaining disk space (29324476416 B)
[2025-12-13 12:42:32] 2025-12-13 17:41:55,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 12:42:32] 2025-12-13 17:41:55,397 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 12:42:32] 2025-12-13 17:41:55,397 | INFO     | update_server=False
[2025-12-13 12:42:32] 2025-12-13 17:41:55,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 12:42:32] 2025-12-13 17:41:55,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 12:42:32] 2025-12-13 17:41:55,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:42:32] 2025-12-13 17:41:55,664 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 12:42:32] 2025-12-13 17:41:55,665 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 12:42:32] 2025-12-13 17:41:55,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:42:32] 2025-12-13 17:41:55,665 | INFO     | will abort loop
[2025-12-13 12:42:32] 2025-12-13 17:41:55,669 | INFO     | all payload control threads have been joined
[2025-12-13 12:42:32] 2025-12-13 17:41:56,395 | INFO     | all data control threads have been joined
[2025-12-13 12:42:32] 2025-12-13 17:41:56,403 | INFO     | [job] retrieve thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,404 | INFO     | [job] queue monitor thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,484 | INFO     | [payload] validate_post thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,556 | INFO     | [payload] failed_post thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,670 | INFO     | [payload] control thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,670 | INFO     | [job] job monitor thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,737 | INFO     | all job control threads have been joined
[2025-12-13 12:42:32] 2025-12-13 17:41:56,805 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,811 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:56,823 | INFO     | [job] validate thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,080 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,281 | INFO     | [data] copytool_in thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,401 | INFO     | [data] control thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,401 | INFO     | [data] copytool_out thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,742 | INFO     | [job] control thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:41:57,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 12:42:32] 2025-12-13 17:42:01,754 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:42:05,997 | INFO     | job.realtimelogging is not enabled
[2025-12-13 12:42:32] 2025-12-13 17:42:07,000 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 12:42:32] 2025-12-13 17:42:25,386 | INFO     | [monitor] cgroup control has ended
[2025-12-13 12:42:32] 2025-12-13 17:42:26,021 | INFO     | PID=12101 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 12:42:32] 2025-12-13 17:42:26,022 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 12:42:32] 2025-12-13 17:42:26,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 12:42:32] 2025-12-13 17:42:26,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 12:42:32] 2025-12-13 17:42:27,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140190848501568)>', '<ExcThread(monitor, started 140190232319744)>']
[2025-12-13 12:42:32] 2025-12-13 17:42:28,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 12:42:32] 2025-12-13 17:42:28,032 | INFO     | [monitor] control thread has ended
[2025-12-13 12:42:32] 2025-12-13 17:42:32,395 | INFO     | all workflow threads have been joined
[2025-12-13 12:42:32] 2025-12-13 17:42:32,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 12:42:32] 2025-12-13 17:42:32,395 | INFO     | traces error code: 0
[2025-12-13 12:42:32] 2025-12-13 17:42:32,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 12:42:32] 2025-12-13 17:42:32,484 [wrapper] ==== pilot stdout END ====
[2025-12-13 12:42:32] 2025-12-13 17:42:32,488 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 12:42:32] 2025-12-13 17:42:32,492 [wrapper] pilotpid: 12101
[2025-12-13 12:42:32] 2025-12-13 17:42:32,496 [wrapper] Pilot exit status: 0
[2025-12-13 12:42:32] 2025-12-13 17:42:32,512 [wrapper] pandaids: 6929300803
[2025-12-13 12:42:32] 2025-12-13 17:42:32,554 [wrapper] cleanup supervisor_pilot 22896 12102
[2025-12-13 12:42:32] 2025-12-13 17:42:32,558 [wrapper] Test setup, not cleaning
[2025-12-13 12:42:32] 2025-12-13 17:42:32,562 [wrapper] apfmon messages muted
[2025-12-13 12:42:32] 2025-12-13 17:42:32,566 [wrapper] ==== wrapper stdout END ====
[2025-12-13 12:42:32] 2025-12-13 17:42:32,570 [wrapper] ==== wrapper stderr END ====
[2025-12-13 12:42:32]  *** Error codes and diagnostics ***
[2025-12-13 12:42:32]     "exeErrorCode": 0,
[2025-12-13 12:42:32]     "exeErrorDiag": "",
[2025-12-13 12:42:32]     "pilotErrorCode": 0,
[2025-12-13 12:42:32]     "pilotErrorDiag": "",
[2025-12-13 12:42:32]  *** Listing of results directory ***
[2025-12-13 12:42:32] total 436048
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 12:42:32] -rwx------ 1 boincer umatlas     36322 Dec 13 06:36 runpilot2-wrapper.sh
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 06:36 queuedata.json
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas       100 Dec 13 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 12:42:32] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 10:59 run_atlas
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas       105 Dec 13 10:59 job.xml
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas 222073110 Dec 13 10:59 EVNT.47898761._000206.pool.root.1
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 10:59 start_atlas.sh
[2025-12-13 12:42:32] drwxrwx--x 2 boincer umatlas      4096 Dec 13 10:59 shared
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas    592386 Dec 13 10:59 input.tar.gz
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas         0 Dec 13 10:59 boinc_lockfile
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas      2503 Dec 13 11:00 pandaJob.out
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas        57 Dec 13 11:00 setup.sh.local
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas    991736 Dec 13 11:00 agis_schedconf.cvmfs.json
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas   1516240 Dec 13 11:00 agis_ddmendpoints.agis.ALL.json
[2025-12-13 12:42:32] drwx------ 5 boincer umatlas      4096 Dec 13 11:00 pilot3
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 12:39 init_data.xml
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas 217999003 Dec 13 12:41 HITS.47898763._003252.pool.root.1
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas        95 Dec 13 12:41 pilot_heartbeat.json
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas      1044 Dec 13 12:41 memory_monitor_summary.json
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas    391993 Dec 13 12:41 log.47898763._003252.job.log.tgz.1
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas       529 Dec 13 12:41 boinc_task_state.xml
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas      7839 Dec 13 12:41 heartbeat.json
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 12:42 boinc_mmap_file
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas        27 Dec 13 12:42 wrapper_checkpoint.txt
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas      5004 Dec 13 12:42 pilotlog.txt
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas    867532 Dec 13 12:42 log.47898763._003252.job.log.1
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas       357 Dec 13 12:42 output.list
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas       620 Dec 13 12:42 runtime_log
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas   1280000 Dec 13 12:42 result.tar.gz
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas       658 Dec 13 12:42 RzKMDmF6co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgBTKDmEHtkhn.diag
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 12:42 runtime_log.err
[2025-12-13 12:42:32] -rw-r--r-- 1 boincer umatlas     21008 Dec 13 12:42 stderr.txt
[2025-12-13 12:42:32] HITS file was successfully produced:
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas 217999003 Dec 13 12:41 shared/HITS.pool.root.1
[2025-12-13 12:42:32]  *** Contents of shared directory: ***
[2025-12-13 12:42:32] total 431616
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas 222073110 Dec 13 10:59 ATLAS.root_0
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 10:59 start_atlas.sh
[2025-12-13 12:42:32] -rw-r--r-- 2 boincer umatlas    592386 Dec 13 10:59 input.tar.gz
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas 217999003 Dec 13 12:41 HITS.pool.root.1
[2025-12-13 12:42:32] -rw------- 1 boincer umatlas   1280000 Dec 13 12:42 result.tar.gz
12:42:33 (8213): run_atlas exited; CPU time 65470.159960
12:42:33 (8213): called boinc_finish(0)

</stderr_txt>
]]>

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