Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:54 (2053319): wrapper (7.7.26015): starting
13:10:54 (2053319): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 13:10:54] Arguments: --nthreads 8
[2025-12-13 13:10:54] Threads: 8
[2025-12-13 13:10:54] Checking for CVMFS
[2025-12-13 13:10:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 13:10:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 13:10:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 13:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 13:10:56] 2.13.3.0 13172 54874 378688 153968 3 389 27047530 32935937 37600 16776704 0 281256149 99.465 369488788 34205 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 13:10:56] CVMFS is ok
[2025-12-13 13:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 13:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 13:10:56] Further information can be found at the LHC@home message board.
[2025-12-13 13:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 13:10:56] Checking for apptainer binary...
[2025-12-13 13:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 13:10:56] Running /usr/bin/apptainer --version
[2025-12-13 13:10:56] apptainer version 1.4.5-2.el9
[2025-12-13 13:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 13:10:57] c6-6-8-3.aglt2.org
[2025-12-13 13:10:57] apptainer works
[2025-12-13 13:10:57] Set ATHENA_PROC_NUMBER=8
[2025-12-13 13:10:57] Set ATHENA_CORE_NUMBER=8
[2025-12-13 13:10:57] Starting ATLAS job with PandaID=6929300909
[2025-12-13 13:10:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:31:56]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:31:56] 2025-12-14 02:30:50,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:31:56] 2025-12-14 02:30:50,980 | INFO     | time since job start (29934s) is within the limit (174528.0s)
[2025-12-13 21:31:56] 2025-12-14 02:30:51,667 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 21:31:56] 2025-12-14 02:30:51,734 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2717.1979687499984
[2025-12-13 21:31:56] 2025-12-14 02:30:51,831 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6929300909/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:31:56] 2025-12-14 02:30:51,832 | INFO     | extracted standard info from prmon json
[2025-12-13 21:31:56] 2025-12-14 02:30:51,832 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:31:56] 2025-12-14 02:30:51,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:31:56] 2025-12-14 02:30:51,841 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:31:56] 2025-12-14 02:30:51,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:31:56] 2025-12-14 02:30:51,897 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:31:56] 2025-12-14 02:30:51,898 | INFO     | sum of square deviations: 36036803760.948845
[2025-12-13 21:31:56] 2025-12-14 02:30:51,924 | INFO     | sum of deviations: 208994582929.72754
[2025-12-13 21:31:56] 2025-12-14 02:30:51,925 | INFO     | mean x: 1765664505.7602458
[2025-12-13 21:31:56] 2025-12-14 02:30:51,925 | INFO     | mean y: 2473525.604508197
[2025-12-13 21:31:56] 2025-12-14 02:30:51,925 | INFO     | intersect: -10237455615.255291
[2025-12-13 21:31:56] 2025-12-14 02:30:51,947 | INFO     | chi2: 5.440395246934473
[2025-12-13 21:31:56] 2025-12-14 02:30:51,948 | INFO     | sum of square deviations: 34940427396.650116
[2025-12-13 21:31:56] 2025-12-14 02:30:51,981 | INFO     | sum of deviations: 237508212512.39316
[2025-12-13 21:31:56] 2025-12-14 02:30:51,981 | INFO     | mean x: 1765664353.258799
[2025-12-13 21:31:56] 2025-12-14 02:30:51,981 | INFO     | mean y: 2477456.4368530023
[2025-12-13 21:31:56] 2025-12-14 02:30:51,982 | INFO     | intersect: -11999659199.726482
[2025-12-13 21:31:56] 2025-12-14 02:30:51,982 | INFO     | chi2: 4.764338496831144
[2025-12-13 21:31:56] 2025-12-14 02:30:51,982 | INFO     | current chi2=4.764338496831144 (change=12.426610924716742 %)
[2025-12-13 21:31:56] 2025-12-14 02:30:51,982 | INFO     | right removable region: 482
[2025-12-13 21:31:56] 2025-12-14 02:30:51,983 | INFO     | sum of square deviations: 34940439231.130394
[2025-12-13 21:31:56] 2025-12-14 02:30:52,004 | INFO     | sum of deviations: 68888549837.56532
[2025-12-13 21:31:56] 2025-12-14 02:30:52,004 | INFO     | mean x: 1765664658.2608695
[2025-12-13 21:31:56] 2025-12-14 02:30:52,004 | INFO     | mean y: 2492995.225672878
[2025-12-13 21:31:56] 2025-12-14 02:30:52,004 | INFO     | intersect: -3478690426.7234435
[2025-12-13 21:31:56] 2025-12-14 02:30:52,005 | INFO     | chi2: 2.3248778203523126
[2025-12-13 21:31:56] 2025-12-14 02:30:52,005 | INFO     | current chi2=2.3248778203523126 (change=57.26638020165312 %)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,006 | INFO     | sum of square deviations: 33866540116.811752
[2025-12-13 21:31:56] 2025-12-14 02:30:52,011 | INFO     | sum of deviations: -17744935698.188293
[2025-12-13 21:31:56] 2025-12-14 02:30:52,011 | INFO     | mean x: 1765664810.7615063
[2025-12-13 21:31:56] 2025-12-14 02:30:52,011 | INFO     | mean y: 2505280.761506276
[2025-12-13 21:31:56] 2025-12-14 02:30:52,011 | INFO     | intersect: 927654658.9810827
[2025-12-13 21:31:56] 2025-12-14 02:30:52,012 | INFO     | chi2: 1.1244569846921668
[2025-12-13 21:31:56] 2025-12-14 02:30:52,012 | INFO     | current chi2=1.1244569846921668 (change=51.633717056074524 %)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,012 | INFO     | sum of square deviations: 32814845063.96611
[2025-12-13 21:31:56] 2025-12-14 02:30:52,017 | INFO     | sum of deviations: -47119418707.00423
[2025-12-13 21:31:56] 2025-12-14 02:30:52,017 | INFO     | mean x: 1765664963.2642705
[2025-12-13 21:31:56] 2025-12-14 02:30:52,018 | INFO     | mean y: 2509540.408033827
[2025-12-13 21:31:56] 2025-12-14 02:30:52,018 | INFO     | intersect: 2537859213.342949
[2025-12-13 21:31:56] 2025-12-14 02:30:52,018 | INFO     | chi2: 0.9865432474406184
[2025-12-13 21:31:56] 2025-12-14 02:30:52,018 | INFO     | current chi2=0.9865432474406184 (change=12.264918901215587 %)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,018 | INFO     | left removable region: 30
[2025-12-13 21:31:56] 2025-12-14 02:30:52,019 | INFO     | sum of square deviations: 28635496364.247784
[2025-12-13 21:31:56] 2025-12-14 02:30:52,023 | INFO     | sum of deviations: -31845123106.53984
[2025-12-13 21:31:56] 2025-12-14 02:30:52,023 | INFO     | mean x: 1765665237.7522123
[2025-12-13 21:31:56] 2025-12-14 02:30:52,024 | INFO     | mean y: 2516247.5398230087
[2025-12-13 21:31:56] 2025-12-14 02:30:52,024 | INFO     | intersect: 1966087129.8437576
[2025-12-13 21:31:56] 2025-12-14 02:30:52,024 | INFO     | chi2: 0.24154238817925866
[2025-12-13 21:31:56] 2025-12-14 02:30:52,025 | INFO     | current memory leak: -1.11 B/s (using 452 data points, chi2=0.24)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,025 | INFO     | could have reported an average CPU frequency of 2708 MHz (20 samples)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,025 | INFO     | ..............................
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . Timing measurements:
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . get job = 0 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . initial setup = 6 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . payload setup = 38 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . stage-in = 0 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . payload execution = 29782 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . stage-out = 6 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | . log creation = 1 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,026 | INFO     | ..............................
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | 
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | job summary report
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | --------------------------------------------------
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | PanDA job id: 6929300909
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | task id: 47898763
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | errors: (none)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | pilot state: finished 
[2025-12-13 21:31:56] 2025-12-14 02:30:52,146 | INFO     | transexitcode: 0
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | exeerrorcode: 0
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | exeerrordiag: 
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | exitcode: 0
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | exitmsg: OK
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | cpuconsumptiontime: 66336 s
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | nevents: 400
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | neventsw: 0
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | pid: 2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | pgrp: 2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | corecount: 8
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | event service: False
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | sizes: {0: 2283124, 1: 2283980, 2: 2283980, 14: 2284008, 25: 2284036, 32: 2284326, 36: 2284482, 29825: 2322267, 29826: 2322266, 29833: 2331320, 29836: 2331376, 298
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | --------------------------------------------------
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | 
[2025-12-13 21:31:56] 2025-12-14 02:30:52,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-13 21:31:56] 2025-12-14 02:30:52,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | job 6929300909 has completed (purged errors)
[2025-12-13 21:31:56] 2025-12-14 02:30:52,213 | INFO     | overall cleanup function is called
[2025-12-13 21:31:56] 2025-12-14 02:30:53,240 | INFO     | --- collectZombieJob: --- 10, [2081322]
[2025-12-13 21:31:56] 2025-12-14 02:30:53,240 | INFO     | zombie collector waiting for pid 2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:53,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:31:56] 2025-12-14 02:30:53,241 | INFO     | collected zombie processes
[2025-12-13 21:31:56] 2025-12-14 02:30:53,241 | INFO     | will attempt to kill all subprocesses of pid=2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:54,973 | INFO     | process IDs to be killed: [2081322] (in reverse order)
[2025-12-13 21:31:56] 2025-12-14 02:30:55,266 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:31:56] 2025-12-14 02:30:55,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:31:56] 2025-12-14 02:30:55,393 | INFO     | did not find any defunct processes belonging to 2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:55,514 | INFO     | did not find any defunct processes belonging to 2081322
[2025-12-13 21:31:56] 2025-12-14 02:30:55,514 | INFO     | ready for new job
[2025-12-13 21:31:56] 2025-12-14 02:30:55,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:31:56] 2025-12-14 02:30:55,542 | INFO     | ***************************************
[2025-12-13 21:31:56] 2025-12-14 02:30:55,542 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:31:56] 2025-12-14 02:30:55,542 | INFO     | ***************************************
[2025-12-13 21:31:56] 2025-12-14 02:30:55,542 | INFO     | 
[2025-12-13 21:31:56] 2025-12-14 02:30:55,554 | INFO     | architecture information:
[2025-12-13 21:31:56] 2025-12-14 02:30:55,573 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:31:56] 2025-12-14 02:30:55,750 | INFO     | cat /etc/os-release:
[2025-12-13 21:31:56] NAME="CentOS Linux"
[2025-12-13 21:31:56] VERSION="7 (Core)"
[2025-12-13 21:31:56] ID="centos"
[2025-12-13 21:31:56] ID_LIKE="rhel fedora"
[2025-12-13 21:31:56] VERSION_ID="7"
[2025-12-13 21:31:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:31:56] ANSI_COLOR="0;31"
[2025-12-13 21:31:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:31:56] HOME_URL="https://www.centos.org/"
[2025-12-13 21:31:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:31:56] 
[2025-12-13 21:31:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:31:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:31:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:31:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:31:56] 
[2025-12-13 21:31:56] 2025-12-14 02:30:55,751 | INFO     | ***************************************
[2025-12-13 21:31:56] 2025-12-14 02:30:56,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-13 21:31:56] 2025-12-14 02:30:56,374 | INFO     | sufficient remaining disk space (94101307392 B)
[2025-12-13 21:31:56] 2025-12-14 02:30:56,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:31:56] 2025-12-14 02:30:56,374 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:31:56] 2025-12-14 02:30:56,374 | INFO     | update_server=False
[2025-12-13 21:31:56] 2025-12-14 02:30:56,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:31:56] 2025-12-14 02:30:56,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:31:56] 2025-12-14 02:30:56,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:31:56] 2025-12-14 02:30:56,490 | INFO     | aborting loop
[2025-12-13 21:31:56] 2025-12-14 02:30:56,858 | INFO     | all payload control threads have been joined
[2025-12-13 21:31:56] 2025-12-14 02:30:57,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:31:56] 2025-12-14 02:30:57,136 | INFO     | all data control threads have been joined
[2025-12-13 21:31:56] 2025-12-14 02:30:57,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:31:56] 2025-12-14 02:30:57,273 | INFO     | all job control threads have been joined
[2025-12-13 21:31:56] 2025-12-14 02:30:57,381 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:57,518 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:57,865 | INFO     | [payload] control thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,009 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,057 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,058 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,142 | INFO     | [job] validate thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,143 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,143 | INFO     | [data] control thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,166 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,280 | INFO     | [job] control thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,753 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:58,863 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:30:59,151 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:31:00,502 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:31:56] 2025-12-14 02:31:28,249 | INFO     | PID=2063612 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 21:31:56] 2025-12-14 02:31:28,250 | INFO     | .. there are 44 such processes running
[2025-12-13 21:31:56] 2025-12-14 02:31:28,259 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:31:56] 2025-12-14 02:31:28,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:31:56] 2025-12-14 02:31:28,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:31:56] 2025-12-14 02:31:48,183 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:31:56] 2025-12-14 02:31:49,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603574445888)>', '<ExcThread(monitor, started 140603228661504)>']
[2025-12-13 21:31:56] 2025-12-14 02:31:49,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:31:56] 2025-12-14 02:31:49,408 | INFO     | [monitor] control thread has ended
[2025-12-13 21:31:56] 2025-12-14 02:31:54,113 | INFO     | all workflow threads have been joined
[2025-12-13 21:31:56] 2025-12-14 02:31:54,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:31:56] 2025-12-14 02:31:54,114 | INFO     | traces error code: 0
[2025-12-13 21:31:56] 2025-12-14 02:31:54,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:31:56] 2025-12-14 02:31:54,563 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:31:56] 2025-12-14 02:31:54,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:31:56] 2025-12-14 02:31:54,603 [wrapper] pilotpid: 2063612
[2025-12-13 21:31:56] 2025-12-14 02:31:54,625 [wrapper] Pilot exit status: 0
[2025-12-13 21:31:56] 2025-12-14 02:31:54,709 [wrapper] pandaids: 6929300909
[2025-12-13 21:31:56] 2025-12-14 02:31:55,831 [wrapper] cleanup supervisor_pilot 4178539 2063613
[2025-12-13 21:31:56] 2025-12-14 02:31:55,854 [wrapper] Test setup, not cleaning
[2025-12-13 21:31:56] 2025-12-14 02:31:55,869 [wrapper] apfmon messages muted
[2025-12-13 21:31:56] 2025-12-14 02:31:55,872 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:31:56] 2025-12-14 02:31:55,878 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:31:56]  *** Error codes and diagnostics ***
[2025-12-13 21:31:56]     "exeErrorCode": 0,
[2025-12-13 21:31:56]     "exeErrorDiag": "",
[2025-12-13 21:31:56]     "pilotErrorCode": 0,
[2025-12-13 21:31:56]     "pilotErrorDiag": "",
[2025-12-13 21:31:56]  *** Listing of results directory ***
[2025-12-13 21:31:56] total 452392
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 06:35 pilot3.tar.gz
[2025-12-13 21:31:56] -rwx------. 1 boincer umatlas     36322 Dec 13 06:36 runpilot2-wrapper.sh
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 06:36 queuedata.json
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas       100 Dec 13 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:31:56] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 13:10 run_atlas
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas       105 Dec 13 13:10 job.xml
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas 226057732 Dec 13 13:10 EVNT.47898761._000210.pool.root.1
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 13:10 start_atlas.sh
[2025-12-13 21:31:56] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 13:10 shared
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas    592395 Dec 13 13:10 input.tar.gz
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas         0 Dec 13 13:10 boinc_lockfile
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas      2504 Dec 13 13:10 pandaJob.out
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas        57 Dec 13 13:10 setup.sh.local
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas    991736 Dec 13 13:11 agis_schedconf.cvmfs.json
[2025-12-13 21:31:56] drwx------. 5 boincer umatlas      4096 Dec 13 13:11 pilot3
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas      6879 Dec 13 21:28 init_data.xml
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas 224608183 Dec 13 21:28 HITS.47898763._003358.pool.root.1
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas       530 Dec 13 21:28 boinc_task_state.xml
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas      1044 Dec 13 21:30 memory_monitor_summary.json
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas   1516240 Dec 13 21:30 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas    645676 Dec 13 21:30 log.47898763._003358.job.log.tgz.1
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas      7822 Dec 13 21:30 heartbeat.json
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas        95 Dec 13 21:31 pilot_heartbeat.json
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas        28 Dec 13 21:31 wrapper_checkpoint.txt
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 21:31 boinc_mmap_file
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas      4824 Dec 13 21:31 pilotlog.txt
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas   3687974 Dec 13 21:31 log.47898763._003358.job.log.1
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas       357 Dec 13 21:31 output.list
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas       620 Dec 13 21:31 runtime_log
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas   4352000 Dec 13 21:31 result.tar.gz
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas       658 Dec 13 21:31 sCpNDmP6co8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmA4OKDmgRNBYm.diag
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 21:31 runtime_log.err
[2025-12-13 21:31:56] -rw-r--r--. 1 boincer umatlas     21254 Dec 13 21:31 stderr.txt
[2025-12-13 21:31:56] HITS file was successfully produced:
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas 224608183 Dec 13 21:28 shared/HITS.pool.root.1
[2025-12-13 21:31:56]  *** Contents of shared directory: ***
[2025-12-13 21:31:56] total 444956
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas 226057732 Dec 13 13:10 ATLAS.root_0
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 13:10 start_atlas.sh
[2025-12-13 21:31:56] -rw-r--r--. 2 boincer umatlas    592395 Dec 13 13:10 input.tar.gz
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas 224608183 Dec 13 21:28 HITS.pool.root.1
[2025-12-13 21:31:56] -rw-------. 1 boincer umatlas   4352000 Dec 13 21:31 result.tar.gz
21:31:57 (2053319): run_atlas exited; CPU time 67894.894360
21:31:57 (2053319): called boinc_finish(0)

</stderr_txt>
]]>

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