Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:43 (1523466): wrapper (7.7.26015): starting
10:43:43 (1523466): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 10:43:43] Arguments: --nthreads 9
[2025-12-13 10:43:43] Threads: 9
[2025-12-13 10:43:43] Checking for CVMFS
[2025-12-13 10:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 10:43:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 10:43:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 10:43:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 10:43:45] 2.13.3.0 13172 54726 371560 153965 2 309 25076210 32935936 38989 16776704 0 280881457 99.465 369086022 34209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 10:43:45] CVMFS is ok
[2025-12-13 10:43:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 10:43:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 10:43:45] Further information can be found at the LHC@home message board.
[2025-12-13 10:43:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 10:43:45] Checking for apptainer binary...
[2025-12-13 10:43:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 10:43:45] Running /usr/bin/apptainer --version
[2025-12-13 10:43:45] apptainer version 1.4.5-2.el9
[2025-12-13 10:43:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 10:43:46] c6-6-8-3.aglt2.org
[2025-12-13 10:43:46] apptainer works
[2025-12-13 10:43:46] Set ATHENA_PROC_NUMBER=9
[2025-12-13 10:43:46] Set ATHENA_CORE_NUMBER=9
[2025-12-13 10:43:46] Starting ATLAS job with PandaID=6929042715
[2025-12-13 10:43:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 16:54:59]  *** The last 200 lines of the pilot log: ***
[2025-12-13 16:54:59] 2025-12-13 21:54:26,660 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 16:54:59] 2025-12-13 21:54:26,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 16:54:59] 2025-12-13 21:54:26,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 16:54:59] 2025-12-13 21:54:26,666 | INFO     | fitting pss+swap vs Time
[2025-12-13 16:54:59] 2025-12-13 21:54:26,666 | INFO     | sum of square deviations: 14587894941.09136
[2025-12-13 16:54:59] 2025-12-13 21:54:26,669 | INFO     | sum of deviations: 169810316983.49045
[2025-12-13 16:54:59] 2025-12-13 21:54:26,669 | INFO     | mean x: 1765651816.3407202
[2025-12-13 16:54:59] 2025-12-13 21:54:26,669 | INFO     | mean y: 2498974.191135734
[2025-12-13 16:54:59] 2025-12-13 21:54:26,669 | INFO     | intersect: -20550562027.827747
[2025-12-13 16:54:59] 2025-12-13 21:54:26,670 | INFO     | chi2: 3.4010350298940306
[2025-12-13 16:54:59] 2025-12-13 21:54:26,670 | INFO     | sum of square deviations: 13990135200.502834
[2025-12-13 16:54:59] 2025-12-13 21:54:26,673 | INFO     | sum of deviations: 166534673545.17416
[2025-12-13 16:54:59] 2025-12-13 21:54:26,673 | INFO     | mean x: 1765651663.8455057
[2025-12-13 16:54:59] 2025-12-13 21:54:26,673 | INFO     | mean y: 2498138.4213483147
[2025-12-13 16:54:59] 2025-12-13 21:54:26,673 | INFO     | intersect: -21015327580.835205
[2025-12-13 16:54:59] 2025-12-13 21:54:26,674 | INFO     | chi2: 3.401738000661107
[2025-12-13 16:54:59] 2025-12-13 21:54:26,674 | INFO     | current chi2=3.401738000661107 (change=-0.02066931863087532 %)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,674 | INFO     | right removable region: 355
[2025-12-13 16:54:59] 2025-12-13 21:54:26,674 | INFO     | sum of square deviations: 13990060170.502834
[2025-12-13 16:54:59] 2025-12-13 21:54:26,677 | INFO     | sum of deviations: 70783164137.37085
[2025-12-13 16:54:59] 2025-12-13 21:54:26,677 | INFO     | mean x: 1765651968.8455057
[2025-12-13 16:54:59] 2025-12-13 21:54:26,677 | INFO     | mean y: 2524195.606741573
[2025-12-13 16:54:59] 2025-12-13 21:54:26,677 | INFO     | intersect: -8930849327.95913
[2025-12-13 16:54:59] 2025-12-13 21:54:26,678 | INFO     | chi2: 0.6109864777804501
[2025-12-13 16:54:59] 2025-12-13 21:54:26,678 | INFO     | current chi2=0.6109864777804501 (change=82.03527830763073 %)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,678 | INFO     | sum of square deviations: 13408783849.897377
[2025-12-13 16:54:59] 2025-12-13 21:54:26,681 | INFO     | sum of deviations: 30625150412.162388
[2025-12-13 16:54:59] 2025-12-13 21:54:26,681 | INFO     | mean x: 1765652121.3504274
[2025-12-13 16:54:59] 2025-12-13 21:54:26,681 | INFO     | mean y: 2534701.9173789173
[2025-12-13 16:54:59] 2025-12-13 21:54:26,681 | INFO     | intersect: -4030147336.754181
[2025-12-13 16:54:59] 2025-12-13 21:54:26,682 | INFO     | chi2: 0.1377765908977355
[2025-12-13 16:54:59] 2025-12-13 21:54:26,682 | INFO     | current chi2=0.1377765908977355 (change=77.45014073007951 %)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,682 | INFO     | sum of square deviations: 12843875872.184956
[2025-12-13 16:54:59] 2025-12-13 21:54:26,685 | INFO     | sum of deviations: 14371512036.156069
[2025-12-13 16:54:59] 2025-12-13 21:54:26,685 | INFO     | mean x: 1765652273.849711
[2025-12-13 16:54:59] 2025-12-13 21:54:26,685 | INFO     | mean y: 2539080.0606936417
[2025-12-13 16:54:59] 2025-12-13 21:54:26,685 | INFO     | intersect: -1973117891.2317832
[2025-12-13 16:54:59] 2025-12-13 21:54:26,686 | INFO     | chi2: 0.06529073770301902
[2025-12-13 16:54:59] 2025-12-13 21:54:26,686 | INFO     | current chi2=0.06529073770301902 (change=52.61115311563995 %)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,686 | INFO     | sum of square deviations: 12295061219.472143
[2025-12-13 16:54:59] 2025-12-13 21:54:26,688 | INFO     | sum of deviations: 11791896241.304996
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | mean x: 1765652426.3489735
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | mean y: 2539793.4428152493
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | intersect: -1690854801.188522
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | chi2: 0.06285582795444522
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | current chi2=0.06285582795444522 (change=3.729334105013811 %)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,689 | INFO     | left removable region: 40
[2025-12-13 16:54:59] 2025-12-13 21:54:26,691 | INFO     | sum of square deviations: 9691585850.74284
[2025-12-13 16:54:59] 2025-12-13 21:54:26,693 | INFO     | sum of deviations: 14304392655.304777
[2025-12-13 16:54:59] 2025-12-13 21:54:26,693 | INFO     | mean x: 1765652853.3619049
[2025-12-13 16:54:59] 2025-12-13 21:54:26,693 | INFO     | mean y: 2538450.892063492
[2025-12-13 16:54:59] 2025-12-13 21:54:26,693 | INFO     | intersect: -2603494462.2366056
[2025-12-13 16:54:59] 2025-12-13 21:54:26,694 | INFO     | chi2: 0.0028543491904340253
[2025-12-13 16:54:59] 2025-12-13 21:54:26,694 | INFO     | current memory leak: 1.48 B/s (using 315 data points, chi2=0.00)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | could have reported an average CPU frequency of 2724 MHz (16 samples)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | ..............................
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . Timing measurements:
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . get job = 0 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . initial setup = 3 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . payload setup = 47 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . stage-in = 0 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . payload execution = 22043 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . stage-out = 2 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | . log creation = 0 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,695 | INFO     | ..............................
[2025-12-13 16:54:59] 2025-12-13 21:54:26,990 | INFO     | 
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | job summary report
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | --------------------------------------------------
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | PanDA job id: 6929042715
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | task id: 47886831
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | errors: (none)
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | pilot state: finished 
[2025-12-13 16:54:59] 2025-12-13 21:54:26,991 | INFO     | transexitcode: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | exeerrorcode: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | exeerrordiag: 
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | exitcode: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | exitmsg: OK
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | cpuconsumptiontime: 47458 s
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | nevents: 400
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | neventsw: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | pid: 1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | pgrp: 1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | corecount: 9
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | event service: False
[2025-12-13 16:54:59] 2025-12-13 21:54:26,992 | INFO     | sizes: {0: 2283160, 1: 2283845, 2: 2284044, 13: 2284044, 24: 2284100, 33: 2284390, 35: 2284574, 22091: 2318372, 22093: 2327370, 22094: 2327454, 22108: 2327648}
[2025-12-13 16:54:59] 2025-12-13 21:54:26,993 | INFO     | --------------------------------------------------
[2025-12-13 16:54:59] 2025-12-13 21:54:26,993 | INFO     | 
[2025-12-13 16:54:59] 2025-12-13 21:54:26,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 16:54:59] 2025-12-13 21:54:27,014 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | job 6929042715 has completed (purged errors)
[2025-12-13 16:54:59] 2025-12-13 21:54:27,016 | INFO     | overall cleanup function is called
[2025-12-13 16:54:59] 2025-12-13 21:54:28,025 | INFO     | --- collectZombieJob: --- 10, [1540204]
[2025-12-13 16:54:59] 2025-12-13 21:54:28,025 | INFO     | zombie collector waiting for pid 1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:28,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 16:54:59] 2025-12-13 21:54:28,026 | INFO     | collected zombie processes
[2025-12-13 16:54:59] 2025-12-13 21:54:28,026 | INFO     | will attempt to kill all subprocesses of pid=1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:28,593 | INFO     | process IDs to be killed: [1540204] (in reverse order)
[2025-12-13 16:54:59] 2025-12-13 21:54:28,765 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 16:54:59] 2025-12-13 21:54:28,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 16:54:59] 2025-12-13 21:54:28,796 | INFO     | did not find any defunct processes belonging to 1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:28,824 | INFO     | did not find any defunct processes belonging to 1540204
[2025-12-13 16:54:59] 2025-12-13 21:54:28,825 | INFO     | ready for new job
[2025-12-13 16:54:59] 2025-12-13 21:54:28,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 16:54:59] 2025-12-13 21:54:28,827 | INFO     | ***************************************
[2025-12-13 16:54:59] 2025-12-13 21:54:28,828 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 16:54:59] 2025-12-13 21:54:28,828 | INFO     | ***************************************
[2025-12-13 16:54:59] 2025-12-13 21:54:28,828 | INFO     | 
[2025-12-13 16:54:59] 2025-12-13 21:54:28,833 | INFO     | architecture information:
[2025-12-13 16:54:59] 2025-12-13 21:54:28,833 | INFO     | executing command: cat /etc/os-release
[2025-12-13 16:54:59] 2025-12-13 21:54:28,854 | INFO     | cat /etc/os-release:
[2025-12-13 16:54:59] NAME="CentOS Linux"
[2025-12-13 16:54:59] VERSION="7 (Core)"
[2025-12-13 16:54:59] ID="centos"
[2025-12-13 16:54:59] ID_LIKE="rhel fedora"
[2025-12-13 16:54:59] VERSION_ID="7"
[2025-12-13 16:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 16:54:59] ANSI_COLOR="0;31"
[2025-12-13 16:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 16:54:59] HOME_URL="https://www.centos.org/"
[2025-12-13 16:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 16:54:59] 
[2025-12-13 16:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 16:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 16:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 16:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 16:54:59] 
[2025-12-13 16:54:59] 2025-12-13 21:54:28,854 | INFO     | ***************************************
[2025-12-13 16:54:59] 2025-12-13 21:54:29,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | INFO     | sufficient remaining disk space (94814339072 B)
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | INFO     | update_server=False
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 16:54:59] 2025-12-13 21:54:29,380 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:54:59] 2025-12-13 21:54:29,381 | INFO     | aborting loop
[2025-12-13 16:54:59] 2025-12-13 21:54:29,635 | INFO     | all data control threads have been joined
[2025-12-13 16:54:59] 2025-12-13 21:54:30,043 | INFO     | all payload control threads have been joined
[2025-12-13 16:54:59] 2025-12-13 21:54:30,386 | INFO     | [job] retrieve thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:30,386 | INFO     | [job] job monitor thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:30,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 16:54:59] 2025-12-13 21:54:30,521 | INFO     | all job control threads have been joined
[2025-12-13 16:54:59] 2025-12-13 21:54:30,533 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:30,640 | INFO     | [data] control thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:30,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,049 | INFO     | [payload] control thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,271 | INFO     | [job] validate thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,533 | INFO     | [job] control thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,555 | INFO     | [data] copytool_in thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,787 | INFO     | [payload] validate_post thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 16:54:59] 2025-12-13 21:54:31,821 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,850 | INFO     | [payload] failed_post thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:31,868 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:32,256 | INFO     | [monitor] cgroup control has ended
[2025-12-13 16:54:59] 2025-12-13 21:54:32,454 | INFO     | [data] copytool_out thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:32,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 16:54:59] 2025-12-13 21:54:32,797 | INFO     | [job] queue monitor thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:36,528 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 16:54:59] 2025-12-13 21:54:36,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984881493824)>', '<ExcThread(monitor, started 139984608663296)>']
[2025-12-13 16:54:59] 2025-12-13 21:54:41,909 | INFO     | all workflow threads have been joined
[2025-12-13 16:54:59] 2025-12-13 21:54:41,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 16:54:59] 2025-12-13 21:54:41,910 | INFO     | traces error code: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:41,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 16:54:59] 2025-12-13 21:54:59,072 | INFO     | PID=1529992 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 16:54:59] 2025-12-13 21:54:59,073 | INFO     | .. there are 42 such processes running
[2025-12-13 16:54:59] 2025-12-13 21:54:59,075 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 16:54:59] 2025-12-13 21:54:59,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 16:54:59] 2025-12-13 21:54:59,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 16:54:59] 2025-12-13 21:54:59,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 16:54:59] 2025-12-13 21:54:59,075 | INFO     | [monitor] control thread has ended
[2025-12-13 16:54:59] 2025-12-13 21:54:59,266 [wrapper] ==== pilot stdout END ====
[2025-12-13 16:54:59] 2025-12-13 21:54:59,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 16:54:59] 2025-12-13 21:54:59,272 [wrapper] pilotpid: 1529992
[2025-12-13 16:54:59] 2025-12-13 21:54:59,275 [wrapper] Pilot exit status: 0
[2025-12-13 16:54:59] 2025-12-13 21:54:59,289 [wrapper] pandaids: 6929042715
[2025-12-13 16:54:59] 2025-12-13 21:54:59,393 [wrapper] cleanup supervisor_pilot 2957861 1529993
[2025-12-13 16:54:59] 2025-12-13 21:54:59,403 [wrapper] Test setup, not cleaning
[2025-12-13 16:54:59] 2025-12-13 21:54:59,408 [wrapper] apfmon messages muted
[2025-12-13 16:54:59] 2025-12-13 21:54:59,412 [wrapper] ==== wrapper stdout END ====
[2025-12-13 16:54:59] 2025-12-13 21:54:59,424 [wrapper] ==== wrapper stderr END ====
[2025-12-13 16:54:59]  *** Error codes and diagnostics ***
[2025-12-13 16:54:59]     "exeErrorCode": 0,
[2025-12-13 16:54:59]     "exeErrorDiag": "",
[2025-12-13 16:54:59]     "pilotErrorCode": 0,
[2025-12-13 16:54:59]     "pilotErrorDiag": "",
[2025-12-13 16:54:59]  *** Listing of results directory ***
[2025-12-13 16:54:59] total 342400
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 01:26 pilot3.tar.gz
[2025-12-13 16:54:59] -rwx------. 1 boincer umatlas     36322 Dec 13 01:51 runpilot2-wrapper.sh
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 01:51 queuedata.json
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas       100 Dec 13 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 16:54:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 10:43 run_atlas
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas       105 Dec 13 10:43 job.xml
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas 193879295 Dec 13 10:43 EVNT.47886829._000150.pool.root.1
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 10:43 start_atlas.sh
[2025-12-13 16:54:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 10:43 shared
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas    592414 Dec 13 10:43 input.tar.gz
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas         0 Dec 13 10:43 boinc_lockfile
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas      2536 Dec 13 10:43 pandaJob.out
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas        57 Dec 13 10:43 setup.sh.local
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas    991736 Dec 13 10:44 agis_schedconf.cvmfs.json
[2025-12-13 16:54:59] drwx------. 5 boincer umatlas      4096 Dec 13 10:44 pilot3
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas 146251600 Dec 13 16:53 HITS.47886831._003704.pool.root.1
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas       531 Dec 13 16:53 boinc_task_state.xml
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas      1042 Dec 13 16:54 memory_monitor_summary.json
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas   1516240 Dec 13 16:54 agis_ddmendpoints.agis.ALL.json
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas    575370 Dec 13 16:54 log.47886831._003704.job.log.tgz.1
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas      7819 Dec 13 16:54 heartbeat.json
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas      6878 Dec 13 16:54 init_data.xml
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 16:54 boinc_mmap_file
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas        28 Dec 13 16:54 wrapper_checkpoint.txt
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas        95 Dec 13 16:54 pilot_heartbeat.json
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas       823 Dec 13 16:54 pilotlog.txt
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas   2710219 Dec 13 16:54 log.47886831._003704.job.log.1
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas       357 Dec 13 16:54 output.list
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas       620 Dec 13 16:54 runtime_log
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas   3307520 Dec 13 16:54 result.tar.gz
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 16:54 runtime_log.err
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas       655 Dec 13 16:54 3ZnNDmMeYo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS9RKDmH8fugn.diag
[2025-12-13 16:54:59] -rw-r--r--. 1 boincer umatlas     21059 Dec 13 16:54 stderr.txt
[2025-12-13 16:54:59] HITS file was successfully produced:
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas 146251600 Dec 13 16:53 shared/HITS.pool.root.1
[2025-12-13 16:54:59]  *** Contents of shared directory: ***
[2025-12-13 16:54:59] total 335992
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas 193879295 Dec 13 10:43 ATLAS.root_0
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 10:43 start_atlas.sh
[2025-12-13 16:54:59] -rw-r--r--. 2 boincer umatlas    592414 Dec 13 10:43 input.tar.gz
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas 146251600 Dec 13 16:53 HITS.pool.root.1
[2025-12-13 16:54:59] -rw-------. 1 boincer umatlas   3307520 Dec 13 16:54 result.tar.gz
16:55:00 (1523466): run_atlas exited; CPU time 48659.601392
16:55:00 (1523466): called boinc_finish(0)

</stderr_txt>
]]>

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