Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:52:34 (1098747): wrapper (7.7.26015): starting
15:52:34 (1098747): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 15:52:34] Arguments: --nthreads 4
[2025-12-13 15:52:34] Threads: 4
[2025-12-13 15:52:34] Checking for CVMFS
[2025-12-13 15:52:34] No cvmfs_config command found, will try listing directly
[2025-12-13 15:52:34] CVMFS is ok
[2025-12-13 15:52:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 15:52:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 15:52:34] Further information can be found at the LHC@home message board.
[2025-12-13 15:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:52:34] Checking for apptainer binary...
[2025-12-13 15:52:34] which: no apptainer in ((null))
[2025-12-13 15:52:34] apptainer is not installed, using version from CVMFS
[2025-12-13 15:52:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:52:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-13 15:52:34] apptainer works
[2025-12-13 15:52:34] Set ATHENA_PROC_NUMBER=4
[2025-12-13 15:52:34] Set ATHENA_CORE_NUMBER=4
[2025-12-13 15:52:34] Starting ATLAS job with PandaID=6929222323
[2025-12-13 15:52:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 19:29:58]  *** The last 200 lines of the pilot log: ***
[2025-12-13 19:29:58] 2025-12-13 18:28:20,458 | INFO     | time since job start (12934s) is within the limit (174528.0s)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,821 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 19:29:58] 2025-12-13 18:28:20,832 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2572.1338437500012
[2025-12-13 19:29:58] 2025-12-13 18:28:20,845 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6929222323/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,846 | INFO     | extracted standard info from prmon json
[2025-12-13 19:29:58] 2025-12-13 18:28:20,846 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 19:29:58] 2025-12-13 18:28:20,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 19:29:58] 2025-12-13 18:28:20,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 19:29:58] 2025-12-13 18:28:20,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 19:29:58] 2025-12-13 18:28:20,851 | INFO     | fitting pss+swap vs Time
[2025-12-13 19:29:58] 2025-12-13 18:28:20,851 | INFO     | sum of square deviations: 2954447953.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,853 | INFO     | sum of deviations: 5886858924.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,853 | INFO     | mean x: 1765644030.5
[2025-12-13 19:29:58] 2025-12-13 18:28:20,853 | INFO     | mean y: 2306139.103773585
[2025-12-13 19:29:58] 2025-12-13 18:28:20,853 | INFO     | intersect: -3515812129.6583815
[2025-12-13 19:29:58] 2025-12-13 18:28:20,854 | INFO     | chi2: 1.9864690910615441
[2025-12-13 19:29:58] 2025-12-13 18:28:20,854 | INFO     | sum of square deviations: 2750295288.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,855 | INFO     | sum of deviations: 17794701803.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,856 | INFO     | mean x: 1765643878.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,856 | INFO     | mean y: 2314860.15942029
[2025-12-13 19:29:58] 2025-12-13 18:28:20,856 | INFO     | intersect: -11421588033.609606
[2025-12-13 19:29:58] 2025-12-13 18:28:20,856 | INFO     | chi2: 1.3118808957804269
[2025-12-13 19:29:58] 2025-12-13 18:28:20,856 | INFO     | current chi2=1.3118808957804269 (change=33.95915890745754 %)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,857 | INFO     | sum of square deviations: 2555770710.5
[2025-12-13 19:29:58] 2025-12-13 18:28:20,858 | INFO     | sum of deviations: 17301640328.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,858 | INFO     | mean x: 1765643725.5
[2025-12-13 19:29:58] 2025-12-13 18:28:20,858 | INFO     | mean y: 2314473.5346534653
[2025-12-13 19:29:58] 2025-12-13 18:28:20,858 | INFO     | intersect: -11950452869.985994
[2025-12-13 19:29:58] 2025-12-13 18:28:20,859 | INFO     | chi2: 1.312641962546713
[2025-12-13 19:29:58] 2025-12-13 18:28:20,859 | INFO     | current chi2=1.312641962546713 (change=-0.05801340416908159 %)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,859 | INFO     | right removable region: 201
[2025-12-13 19:29:58] 2025-12-13 18:28:20,859 | INFO     | sum of square deviations: 2750295288.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | sum of deviations: -19211899126.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | mean x: 1765644183.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | mean y: 2324636.961352657
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | intersect: 12336046795.527143
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | chi2: 0.734206151932821
[2025-12-13 19:29:58] 2025-12-13 18:28:20,861 | INFO     | current chi2=0.734206151932821 (change=63.03963876223866 %)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,862 | INFO     | sum of square deviations: 2555770710.5
[2025-12-13 19:29:58] 2025-12-13 18:28:20,863 | INFO     | sum of deviations: -14951078619.499998
[2025-12-13 19:29:58] 2025-12-13 18:28:20,863 | INFO     | mean x: 1765644335.5
[2025-12-13 19:29:58] 2025-12-13 18:28:20,863 | INFO     | mean y: 2321281.301980198
[2025-12-13 19:29:58] 2025-12-13 18:28:20,863 | INFO     | intersect: 10331216266.161903
[2025-12-13 19:29:58] 2025-12-13 18:28:20,864 | INFO     | chi2: 0.720596008212364
[2025-12-13 19:29:58] 2025-12-13 18:28:20,864 | INFO     | current chi2=0.720596008212364 (change=1.8537223754701393 %)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,864 | INFO     | left removable region: 20
[2025-12-13 19:29:58] 2025-12-13 18:28:20,864 | INFO     | sum of square deviations: 1838657730.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,865 | INFO     | sum of deviations: 1676316356.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,865 | INFO     | mean x: 1765644305.0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,866 | INFO     | mean y: 2326546.5690607736
[2025-12-13 19:29:58] 2025-12-13 18:28:20,866 | INFO     | intersect: -1607422989.2239618
[2025-12-13 19:29:58] 2025-12-13 18:28:20,866 | INFO     | chi2: 0.0004969926071869656
[2025-12-13 19:29:58] 2025-12-13 18:28:20,866 | INFO     | current memory leak: 0.91 B/s (using 181 data points, chi2=0.00)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | could have reported an average CPU frequency of 2550 MHz (11 samples)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | ..............................
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . Timing measurements:
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . get job = 0 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . initial setup = 1 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . payload setup = 6 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . stage-in = 0 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,867 | INFO     | . payload execution = 12899 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,868 | INFO     | . stage-out = 1 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,868 | INFO     | . log creation = 0 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,868 | INFO     | ..............................
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | 
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | job summary report
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | --------------------------------------------------
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | PanDA job id: 6929222323
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | task id: 47886831
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | errors: (none)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | pilot state: finished 
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | transexitcode: 0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | exeerrorcode: 0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | exeerrordiag: 
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | exitcode: 0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | exitmsg: OK
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | cpuconsumptiontime: 48741 s
[2025-12-13 19:29:58] 2025-12-13 18:28:20,970 | INFO     | nevents: 400
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | neventsw: 0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | pid: 1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | pgrp: 1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | corecount: 4
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | event service: False
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | sizes: {0: 2284000, 5: 2284262, 11: 2284318, 12910: 2314386, 12912: 2323406, 12913: 2323462, 12918: 2323784}
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | --------------------------------------------------
[2025-12-13 19:29:58] 2025-12-13 18:28:20,971 | INFO     | 
[2025-12-13 19:29:58] 2025-12-13 18:28:20,972 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-13 19:29:58] 2025-12-13 18:28:20,993 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,994 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 19:29:58] 2025-12-13 18:28:20,996 | INFO     | job 6929222323 has completed (purged errors)
[2025-12-13 19:29:58] 2025-12-13 18:28:20,997 | INFO     | overall cleanup function is called
[2025-12-13 19:29:58] 2025-12-13 18:28:22,006 | INFO     | --- collectZombieJob: --- 10, [1130173]
[2025-12-13 19:29:58] 2025-12-13 18:28:22,006 | INFO     | zombie collector waiting for pid 1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:22,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 19:29:58] 2025-12-13 18:28:22,006 | INFO     | collected zombie processes
[2025-12-13 19:29:58] 2025-12-13 18:28:22,006 | INFO     | will attempt to kill all subprocesses of pid=1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:22,559 | INFO     | process IDs to be killed: [1130173] (in reverse order)
[2025-12-13 19:29:58] 2025-12-13 18:28:22,697 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 19:29:58] 2025-12-13 18:28:22,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 19:29:58] 2025-12-13 18:28:22,711 | INFO     | did not find any defunct processes belonging to 1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:22,725 | INFO     | did not find any defunct processes belonging to 1130173
[2025-12-13 19:29:58] 2025-12-13 18:28:22,725 | INFO     | ready for new job
[2025-12-13 19:29:58] 2025-12-13 18:28:22,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 19:29:58] 2025-12-13 18:28:22,728 | INFO     | ***************************************
[2025-12-13 19:29:58] 2025-12-13 18:28:22,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 19:29:58] 2025-12-13 18:28:22,728 | INFO     | ***************************************
[2025-12-13 19:29:58] 2025-12-13 18:28:22,728 | INFO     | 
[2025-12-13 19:29:58] 2025-12-13 18:28:22,733 | INFO     | architecture information:
[2025-12-13 19:29:58] 2025-12-13 18:28:22,733 | INFO     | executing command: cat /etc/os-release
[2025-12-13 19:29:58] 2025-12-13 18:28:22,747 | INFO     | cat /etc/os-release:
[2025-12-13 19:29:58] NAME="CentOS Linux"
[2025-12-13 19:29:58] VERSION="7 (Core)"
[2025-12-13 19:29:58] ID="centos"
[2025-12-13 19:29:58] ID_LIKE="rhel fedora"
[2025-12-13 19:29:58] VERSION_ID="7"
[2025-12-13 19:29:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 19:29:58] ANSI_COLOR="0;31"
[2025-12-13 19:29:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 19:29:58] HOME_URL="https://www.centos.org/"
[2025-12-13 19:29:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 19:29:58] 
[2025-12-13 19:29:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 19:29:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 19:29:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 19:29:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 19:29:58] 
[2025-12-13 19:29:58] 2025-12-13 18:28:22,747 | INFO     | ***************************************
[2025-12-13 19:29:58] 2025-12-13 18:28:23,250 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-13 19:29:58] 2025-12-13 18:28:23,267 | INFO     | sufficient remaining disk space (680408383488 B)
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | INFO     | update_server=False
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:29:58] 2025-12-13 18:28:23,268 | INFO     | aborting loop
[2025-12-13 19:29:58] 2025-12-13 18:28:23,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 19:29:58] 2025-12-13 18:28:23,441 | INFO     | all data control threads have been joined
[2025-12-13 19:29:58] 2025-12-13 18:28:23,686 | INFO     | all job control threads have been joined
[2025-12-13 19:29:58] 2025-12-13 18:28:24,175 | INFO     | all payload control threads have been joined
[2025-12-13 19:29:58] 2025-12-13 18:28:24,273 | INFO     | [job] retrieve thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:24,274 | INFO     | [job] job monitor thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:24,394 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:24,447 | INFO     | [data] control thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:24,693 | INFO     | [job] control thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,013 | INFO     | [payload] validate_post thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,181 | INFO     | [payload] control thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,234 | INFO     | [job] validate thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,358 | INFO     | [data] copytool_in thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,359 | INFO     | [data] copytool_out thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,422 | INFO     | [payload] failed_post thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,750 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,775 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:25,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 19:29:58] 2025-12-13 18:28:26,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 19:29:58] 2025-12-13 18:28:26,984 | INFO     | [job] queue monitor thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:30,225 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:34,043 | INFO     | job.realtimelogging is not enabled
[2025-12-13 19:29:58] 2025-12-13 18:28:35,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 19:29:58] 2025-12-13 18:28:54,077 | INFO     | PID=1109638 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 19:29:58] 2025-12-13 18:28:54,077 | INFO     | .. there are 5 such processes running
[2025-12-13 19:29:58] 2025-12-13 18:28:54,078 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 19:29:58] 2025-12-13 18:28:54,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 19:29:58] 2025-12-13 18:28:54,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 19:29:58] 2025-12-13 18:29:07,561 | INFO     | [monitor] cgroup control has ended
[2025-12-13 19:29:58] 2025-12-13 18:29:09,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23427328571200)>', '<ExcThread(monitor, started 23427018622720)>']
[2025-12-13 19:29:58] 2025-12-13 18:29:10,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 19:29:58] 2025-12-13 18:29:10,148 | INFO     | [monitor] control thread has ended
[2025-12-13 19:29:58] 2025-12-13 18:29:14,650 | INFO     | all workflow threads have been joined
[2025-12-13 19:29:58] 2025-12-13 18:29:14,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 19:29:58] 2025-12-13 18:29:14,651 | INFO     | traces error code: 0
[2025-12-13 19:29:58] 2025-12-13 18:29:14,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 19:29:58] 2025-12-13 18:29:14,803 [wrapper] ==== pilot stdout END ====
[2025-12-13 19:29:58] 2025-12-13 18:29:14,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 19:29:58] 2025-12-13 18:29:14,809 [wrapper] pilotpid: 1109638
[2025-12-13 19:29:58] 2025-12-13 18:29:14,812 [wrapper] Pilot exit status: 0
[2025-12-13 19:29:58] 2025-12-13 18:29:14,823 [wrapper] pandaids: 6929222323
[2025-12-13 19:29:58] 2025-12-13 18:29:14,903 [wrapper] cleanup supervisor_pilot 1342162 1109639
[2025-12-13 19:29:58] 2025-12-13 18:29:14,907 [wrapper] Test setup, not cleaning
[2025-12-13 19:29:58] 2025-12-13 18:29:14,910 [wrapper] apfmon messages muted
[2025-12-13 19:29:58] 2025-12-13 18:29:14,913 [wrapper] ==== wrapper stdout END ====
[2025-12-13 19:29:58] 2025-12-13 18:29:14,917 [wrapper] ==== wrapper stderr END ====
[2025-12-13 19:29:58]  *** Error codes and diagnostics ***
[2025-12-13 19:29:58]     "exeErrorCode": 0,
[2025-12-13 19:29:58]     "exeErrorDiag": "",
[2025-12-13 19:29:58]     "pilotErrorCode": 0,
[2025-12-13 19:29:58]     "pilotErrorDiag": "",
[2025-12-13 19:29:58]  *** Listing of results directory ***
[2025-12-13 19:29:58] total 338528
[2025-12-13 19:29:58] -rwx------ 1 boinc boinc     36322 Dec 13 09:50 runpilot2-wrapper.sh
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc      5112 Dec 13 09:53 queuedata.json
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc       100 Dec 13 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 19:29:58] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 15:52 run_atlas
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc       105 Dec 13 15:52 job.xml
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc      6638 Dec 13 15:52 init_data.xml
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc 190578442 Dec 13 15:52 EVNT.47886829._000174.pool.root.1
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc     15847 Dec 13 15:52 start_atlas.sh
[2025-12-13 19:29:58] drwxrwx--x 2 boinc boinc      4096 Dec 13 15:52 shared
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc    592415 Dec 13 15:52 input.tar.gz
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc         0 Dec 13 15:52 boinc_lockfile
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc      2537 Dec 13 15:52 pandaJob.out
[2025-12-13 19:29:58] -rw------- 1 boinc boinc    991736 Dec 13 15:52 agis_schedconf.cvmfs.json
[2025-12-13 19:29:58] drwx------ 5 boinc boinc      4096 Dec 13 15:52 pilot3
[2025-12-13 19:29:58] -rw------- 1 boinc boinc 147710450 Dec 13 19:27 HITS.47886831._004355.pool.root.1
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc       529 Dec 13 19:27 boinc_task_state.xml
[2025-12-13 19:29:58] -rw------- 1 boinc boinc      1037 Dec 13 19:28 memory_monitor_summary.json
[2025-12-13 19:29:58] -rw------- 1 boinc boinc   1516240 Dec 13 19:28 agis_ddmendpoints.agis.ALL.json
[2025-12-13 19:29:58] -rw------- 1 boinc boinc    401721 Dec 13 19:28 log.47886831._004355.job.log.tgz.1
[2025-12-13 19:29:58] -rw------- 1 boinc boinc      7828 Dec 13 19:28 heartbeat.json
[2025-12-13 19:29:58] -rw------- 1 boinc boinc        95 Dec 13 19:28 pilot_heartbeat.json
[2025-12-13 19:29:58] -rw------- 1 boinc boinc      4905 Dec 13 19:29 pilotlog.txt
[2025-12-13 19:29:58] -rw------- 1 boinc boinc   1817692 Dec 13 19:29 log.47886831._004355.job.log.1
[2025-12-13 19:29:58] -rw------- 1 boinc boinc       357 Dec 13 19:29 output.list
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc       620 Dec 13 19:29 runtime_log
[2025-12-13 19:29:58] -rw------- 1 boinc boinc   2242560 Dec 13 19:29 result.tar.gz
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc      9206 Dec 13 19:29 runtime_log.err
[2025-12-13 19:29:58] -rw------- 1 boinc boinc       665 Dec 13 19:29 RK6KDm8Vao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNLOKDmeM4K7n.diag
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc        26 Dec 13 19:29 wrapper_checkpoint.txt
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc      8192 Dec 13 19:29 boinc_mmap_file
[2025-12-13 19:29:58] -rw-r--r-- 1 boinc boinc     20839 Dec 13 19:29 stderr.txt
[2025-12-13 19:29:58] HITS file was successfully produced:
[2025-12-13 19:29:58] -rw------- 1 boinc boinc 147710450 Dec 13 19:27 shared/HITS.pool.root.1
[2025-12-13 19:29:58]  *** Contents of shared directory: ***
[2025-12-13 19:29:58] total 333160
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc 190578442 Dec 13 15:52 ATLAS.root_0
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc     15847 Dec 13 15:52 start_atlas.sh
[2025-12-13 19:29:58] -rw-r--r-- 2 boinc boinc    592415 Dec 13 15:52 input.tar.gz
[2025-12-13 19:29:58] -rw------- 1 boinc boinc 147710450 Dec 13 19:27 HITS.pool.root.1
[2025-12-13 19:29:58] -rw------- 1 boinc boinc   2242560 Dec 13 19:29 result.tar.gz
19:30:00 (1098747): run_atlas exited; CPU time 49338.916946
19:30:00 (1098747): called boinc_finish(0)

</stderr_txt>
]]>

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