Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:17:10 (2360762): wrapper (7.7.26015): starting
11:17:10 (2360762): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 11:17:10] Arguments: --nthreads 4
[2025-12-14 11:17:10] Threads: 4
[2025-12-14 11:17:10] Checking for CVMFS
[2025-12-14 11:17:10] No cvmfs_config command found, will try listing directly
[2025-12-14 11:17:10] CVMFS is ok
[2025-12-14 11:17:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 11:17:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 11:17:10] Further information can be found at the LHC@home message board.
[2025-12-14 11:17:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 11:17:10] Checking for apptainer binary...
[2025-12-14 11:17:10] which: no apptainer in ((null))
[2025-12-14 11:17:10] apptainer is not installed, using version from CVMFS
[2025-12-14 11:17:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 11:17:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-14 11:17:11] apptainer works
[2025-12-14 11:17:11] Set ATHENA_PROC_NUMBER=4
[2025-12-14 11:17:11] Set ATHENA_CORE_NUMBER=4
[2025-12-14 11:17:11] Starting ATLAS job with PandaID=6929222267
[2025-12-14 11:17:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 15:17:41]  *** The last 200 lines of the pilot log: ***
[2025-12-14 15:17:41] 2025-12-14 13:41:44,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 15:17:41] 2025-12-14 13:41:45,387 | INFO     | time since job start (12263s) is within the limit (174528.0s)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,768 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 15:17:41] 2025-12-14 13:41:46,779 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2661.7889999999998
[2025-12-14 15:17:41] 2025-12-14 13:41:46,791 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6929222267/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,792 | INFO     | extracted standard info from prmon json
[2025-12-14 15:17:41] 2025-12-14 13:41:46,792 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 15:17:41] 2025-12-14 13:41:46,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 15:17:41] 2025-12-14 13:41:46,793 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 15:17:41] 2025-12-14 13:41:46,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 15:17:41] 2025-12-14 13:41:46,797 | INFO     | fitting pss+swap vs Time
[2025-12-14 15:17:41] 2025-12-14 13:41:46,798 | INFO     | sum of square deviations: 2518000700.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,799 | INFO     | sum of deviations: -77004550114.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,799 | INFO     | mean x: 1765713571.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,799 | INFO     | mean y: 2404611.3184079602
[2025-12-14 15:17:41] 2025-12-14 13:41:46,799 | INFO     | intersect: 54000792763.092705
[2025-12-14 15:17:41] 2025-12-14 13:41:46,800 | INFO     | chi2: 2.4817309670311998
[2025-12-14 15:17:41] 2025-12-14 13:41:46,800 | INFO     | sum of square deviations: 2334722845.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,801 | INFO     | sum of deviations: -62024128817.00001
[2025-12-14 15:17:41] 2025-12-14 13:41:46,802 | INFO     | mean x: 1765713418.5
[2025-12-14 15:17:41] 2025-12-14 13:41:46,802 | INFO     | mean y: 2416867.275510204
[2025-12-14 15:17:41] 2025-12-14 13:41:46,802 | INFO     | intersect: 46910270087.40771
[2025-12-14 15:17:41] 2025-12-14 13:41:46,802 | INFO     | chi2: 1.6953314900517698
[2025-12-14 15:17:41] 2025-12-14 13:41:46,802 | INFO     | current chi2=1.6953314900517698 (change=31.687539359682077 %)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,803 | INFO     | sum of square deviations: 2160561440.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,804 | INFO     | sum of deviations: -59933104570.99998
[2025-12-14 15:17:41] 2025-12-14 13:41:46,804 | INFO     | mean x: 1765713266.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,804 | INFO     | mean y: 2418698.9319371725
[2025-12-14 15:17:41] 2025-12-14 13:41:46,804 | INFO     | intersect: 48982593876.72272
[2025-12-14 15:17:41] 2025-12-14 13:41:46,805 | INFO     | chi2: 1.6835323855119906
[2025-12-14 15:17:41] 2025-12-14 13:41:46,805 | INFO     | current chi2=1.6835323855119906 (change=0.6959762506044682 %)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,805 | INFO     | right removable region: 190
[2025-12-14 15:17:41] 2025-12-14 13:41:46,805 | INFO     | sum of square deviations: 2334722845.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,806 | INFO     | sum of deviations: -97600232898.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,807 | INFO     | mean x: 1765713723.5
[2025-12-14 15:17:41] 2025-12-14 13:41:46,807 | INFO     | mean y: 2421444.8775510206
[2025-12-14 15:17:41] 2025-12-14 13:41:46,807 | INFO     | intersect: 73815923982.81789
[2025-12-14 15:17:41] 2025-12-14 13:41:46,807 | INFO     | chi2: 1.2553356653118728
[2025-12-14 15:17:41] 2025-12-14 13:41:46,807 | INFO     | current chi2=1.2553356653118728 (change=49.4169318919535 %)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,808 | INFO     | sum of square deviations: 2160561440.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,809 | INFO     | sum of deviations: -90149262970.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,809 | INFO     | mean x: 1765713876.0
[2025-12-14 15:17:41] 2025-12-14 13:41:46,809 | INFO     | mean y: 2414901.6963350787
[2025-12-14 15:17:41] 2025-12-14 13:41:46,809 | INFO     | intersect: 73676693073.25435
[2025-12-14 15:17:41] 2025-12-14 13:41:46,809 | INFO     | chi2: 1.2525348822526976
[2025-12-14 15:17:41] 2025-12-14 13:41:46,810 | INFO     | current chi2=1.2525348822526976 (change=0.2231102912605748 %)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,810 | INFO     | left removable region: 20
[2025-12-14 15:17:41] 2025-12-14 13:41:46,810 | INFO     | sum of square deviations: 1523386702.5
[2025-12-14 15:17:41] 2025-12-14 13:41:46,811 | INFO     | sum of deviations: -56626847505.50001
[2025-12-14 15:17:41] 2025-12-14 13:41:46,811 | INFO     | mean x: 1765713845.5
[2025-12-14 15:17:41] 2025-12-14 13:41:46,811 | INFO     | mean y: 2413484.182352941
[2025-12-14 15:17:41] 2025-12-14 13:41:46,811 | INFO     | intersect: 65636968717.854866
[2025-12-14 15:17:41] 2025-12-14 13:41:46,812 | INFO     | chi2: 0.40766319018989106
[2025-12-14 15:17:41] 2025-12-14 13:41:46,812 | INFO     | current memory leak: -37.17 B/s (using 170 data points, chi2=0.41)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,812 | INFO     | could have reported an average CPU frequency of 2645 MHz (10 samples)
[2025-12-14 15:17:41] 2025-12-14 13:41:46,812 | INFO     | ..............................
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . Timing measurements:
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . get job = 0 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . initial setup = 1 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . payload setup = 6 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . stage-in = 0 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . payload execution = 12227 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . stage-out = 1 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | . log creation = 0 s
[2025-12-14 15:17:41] 2025-12-14 13:41:46,813 | INFO     | ..............................
[2025-12-14 15:17:41] 2025-12-14 13:41:47,330 | INFO     | 
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | job summary report
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | --------------------------------------------------
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | PanDA job id: 6929222267
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | task id: 47886831
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | errors: (none)
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | pilot state: finished 
[2025-12-14 15:17:41] 2025-12-14 13:41:47,331 | INFO     | transexitcode: 0
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | exeerrorcode: 0
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | exeerrordiag: 
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | exitcode: 0
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | exitmsg: OK
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | cpuconsumptiontime: 46995 s
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | nevents: 400
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | neventsw: 0
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | pid: 2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | pgrp: 2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | corecount: 4
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | event service: False
[2025-12-14 15:17:41] 2025-12-14 13:41:47,332 | INFO     | sizes: {0: 2284000, 5: 2284262, 11: 2284318, 12237: 2313834, 12238: 2322854, 12241: 2322910, 12248: 2323232}
[2025-12-14 15:17:41] 2025-12-14 13:41:47,333 | INFO     | --------------------------------------------------
[2025-12-14 15:17:41] 2025-12-14 13:41:47,333 | INFO     | 
[2025-12-14 15:17:41] 2025-12-14 13:41:47,333 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-14 15:17:41] 2025-12-14 13:41:47,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | job 6929222267 has completed (purged errors)
[2025-12-14 15:17:41] 2025-12-14 13:41:47,356 | INFO     | overall cleanup function is called
[2025-12-14 15:17:41] 2025-12-14 13:41:48,365 | INFO     | --- collectZombieJob: --- 10, [2371470]
[2025-12-14 15:17:41] 2025-12-14 13:41:48,365 | INFO     | zombie collector waiting for pid 2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:48,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 15:17:41] 2025-12-14 13:41:48,365 | INFO     | collected zombie processes
[2025-12-14 15:17:41] 2025-12-14 13:41:48,365 | INFO     | will attempt to kill all subprocesses of pid=2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:48,787 | INFO     | process IDs to be killed: [2371470] (in reverse order)
[2025-12-14 15:17:41] 2025-12-14 13:41:48,912 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 15:17:41] 2025-12-14 13:41:48,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 15:17:41] 2025-12-14 13:41:48,927 | INFO     | did not find any defunct processes belonging to 2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:48,941 | INFO     | did not find any defunct processes belonging to 2371470
[2025-12-14 15:17:41] 2025-12-14 13:41:48,941 | INFO     | ready for new job
[2025-12-14 15:17:41] 2025-12-14 13:41:48,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 15:17:41] 2025-12-14 13:41:48,943 | INFO     | ***************************************
[2025-12-14 15:17:41] 2025-12-14 13:41:48,944 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 15:17:41] 2025-12-14 13:41:48,944 | INFO     | ***************************************
[2025-12-14 15:17:41] 2025-12-14 13:41:48,944 | INFO     | 
[2025-12-14 15:17:41] 2025-12-14 13:41:48,948 | INFO     | architecture information:
[2025-12-14 15:17:41] 2025-12-14 13:41:48,948 | INFO     | executing command: cat /etc/os-release
[2025-12-14 15:17:41] 2025-12-14 13:41:48,964 | INFO     | cat /etc/os-release:
[2025-12-14 15:17:41] NAME="CentOS Linux"
[2025-12-14 15:17:41] VERSION="7 (Core)"
[2025-12-14 15:17:41] ID="centos"
[2025-12-14 15:17:41] ID_LIKE="rhel fedora"
[2025-12-14 15:17:41] VERSION_ID="7"
[2025-12-14 15:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 15:17:41] ANSI_COLOR="0;31"
[2025-12-14 15:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 15:17:41] HOME_URL="https://www.centos.org/"
[2025-12-14 15:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 15:17:41] 
[2025-12-14 15:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 15:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 15:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 15:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 15:17:41] 
[2025-12-14 15:17:41] 2025-12-14 13:41:48,965 | INFO     | ***************************************
[2025-12-14 15:17:41] 2025-12-14 13:41:49,468 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-14 15:17:41] 2025-12-14 13:41:49,488 | INFO     | sufficient remaining disk space (674681061376 B)
[2025-12-14 15:17:41] 2025-12-14 13:41:49,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 15:17:41] 2025-12-14 13:41:49,489 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 15:17:41] 2025-12-14 13:41:49,489 | INFO     | update_server=False
[2025-12-14 15:17:41] 2025-12-14 13:41:49,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 15:17:41] 2025-12-14 13:41:50,036 | INFO     | all payload control threads have been joined
[2025-12-14 15:17:41] 2025-12-14 13:41:50,041 | INFO     | all data control threads have been joined
[2025-12-14 15:17:41] 2025-12-14 13:41:50,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 15:17:41] 2025-12-14 13:41:50,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 15:17:41] 2025-12-14 13:41:50,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:17:41] 2025-12-14 13:41:50,476 | INFO     | aborting loop
[2025-12-14 15:17:41] 2025-12-14 13:41:50,490 | INFO     | [job] retrieve thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:50,539 | INFO     | [job] validate thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:50,558 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:50,664 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:50,726 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:50,754 | INFO     | all job control threads have been joined
[2025-12-14 15:17:41] 2025-12-14 13:41:50,867 | INFO     | [data] copytool_in thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,041 | INFO     | [payload] control thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,046 | INFO     | [data] control thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,481 | INFO     | [job] job monitor thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,580 | INFO     | [payload] failed_post thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,639 | INFO     | [payload] validate_post thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,760 | INFO     | [job] control thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:51,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:17:41] 2025-12-14 13:41:52,331 | INFO     | [data] copytool_out thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:52,930 | INFO     | [job] queue monitor thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:41:54,150 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 15:17:41] 2025-12-14 13:42:18,954 | INFO     | PID=2364539 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 15:17:41] 2025-12-14 13:42:18,954 | INFO     | .. there are 5 such processes running
[2025-12-14 15:17:41] 2025-12-14 13:42:18,954 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 15:17:41] 2025-12-14 13:42:18,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 15:17:41] 2025-12-14 13:42:18,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 15:17:41] 2025-12-14 13:42:42,498 | INFO     | [monitor] cgroup control has ended
[2025-12-14 15:17:41] 2025-12-14 13:42:43,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22521721427776)>', '<ExcThread(monitor, started 22521476761344)>']
[2025-12-14 15:17:41] 2025-12-14 13:42:44,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 15:17:41] 2025-12-14 13:42:44,078 | INFO     | [monitor] control thread has ended
[2025-12-14 15:17:41] 2025-12-14 13:42:48,269 | INFO     | all workflow threads have been joined
[2025-12-14 15:17:41] 2025-12-14 13:42:48,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 15:17:41] 2025-12-14 13:42:48,270 | INFO     | traces error code: 0
[2025-12-14 15:17:41] 2025-12-14 13:42:48,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 15:17:41] 2025-12-14 13:42:48,430 [wrapper] ==== pilot stdout END ====
[2025-12-14 15:17:41] 2025-12-14 13:42:48,433 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 15:17:41] 2025-12-14 13:42:48,435 [wrapper] pilotpid: 2364539
[2025-12-14 15:17:41] 2025-12-14 13:42:48,438 [wrapper] Pilot exit status: 0
[2025-12-14 15:17:41] 2025-12-14 13:42:48,448 [wrapper] pandaids: 6929222267
[2025-12-14 15:17:41] 2025-12-14 13:42:48,523 [wrapper] cleanup supervisor_pilot 2547852 2364540
[2025-12-14 15:17:41] 2025-12-14 13:42:48,525 [wrapper] Test setup, not cleaning
[2025-12-14 15:17:41] 2025-12-14 13:42:48,528 [wrapper] apfmon messages muted
[2025-12-14 15:17:41] 2025-12-14 13:42:48,531 [wrapper] ==== wrapper stdout END ====
[2025-12-14 15:17:41] 2025-12-14 13:42:48,533 [wrapper] ==== wrapper stderr END ====
[2025-12-14 15:17:41]  *** Error codes and diagnostics ***
[2025-12-14 15:17:41]     "exeErrorCode": 0,
[2025-12-14 15:17:41]     "exeErrorDiag": "",
[2025-12-14 15:17:41]     "pilotErrorCode": 0,
[2025-12-14 15:17:41]     "pilotErrorDiag": "",
[2025-12-14 15:17:41]  *** Listing of results directory ***
[2025-12-14 15:17:41] total 339680
[2025-12-14 15:17:41] -rwx------ 1 boinc boinc     36322 Dec 13 09:50 runpilot2-wrapper.sh
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc      5112 Dec 13 09:53 queuedata.json
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc       100 Dec 14 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 15:17:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 11:17 run_atlas
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc       105 Dec 14 11:17 job.xml
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc      6638 Dec 14 11:17 init_data.xml
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc 191393420 Dec 14 11:17 EVNT.47886829._000172.pool.root.1
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc     15847 Dec 14 11:17 start_atlas.sh
[2025-12-14 15:17:41] drwxrwx--x 2 boinc boinc      4096 Dec 14 11:17 shared
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc    592412 Dec 14 11:17 input.tar.gz
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc         0 Dec 14 11:17 boinc_lockfile
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc      2537 Dec 14 11:17 pandaJob.out
[2025-12-14 15:17:41] -rw------- 1 boinc boinc    991720 Dec 14 11:17 agis_schedconf.cvmfs.json
[2025-12-14 15:17:41] drwx------ 5 boinc boinc      4096 Dec 14 11:17 pilot3
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc       528 Dec 14 14:41 boinc_task_state.xml
[2025-12-14 15:17:41] -rw------- 1 boinc boinc 148298022 Dec 14 14:41 HITS.47886831._004299.pool.root.1
[2025-12-14 15:17:41] -rw------- 1 boinc boinc        95 Dec 14 14:41 pilot_heartbeat.json
[2025-12-14 15:17:41] -rw------- 1 boinc boinc      1034 Dec 14 14:41 memory_monitor_summary.json
[2025-12-14 15:17:41] -rw------- 1 boinc boinc   1516240 Dec 14 14:41 agis_ddmendpoints.agis.ALL.json
[2025-12-14 15:17:41] -rw------- 1 boinc boinc    385293 Dec 14 14:41 log.47886831._004299.job.log.tgz.1
[2025-12-14 15:17:41] -rw------- 1 boinc boinc      7832 Dec 14 14:41 heartbeat.json
[2025-12-14 15:17:41] -rw------- 1 boinc boinc      4833 Dec 14 14:42 pilotlog.txt
[2025-12-14 15:17:41] -rw------- 1 boinc boinc   1726321 Dec 14 14:42 log.47886831._004299.job.log.1
[2025-12-14 15:17:41] -rw------- 1 boinc boinc       357 Dec 14 14:42 output.list
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc       620 Dec 14 14:42 runtime_log
[2025-12-14 15:17:41] -rw------- 1 boinc boinc   2129920 Dec 14 14:42 result.tar.gz
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc      9206 Dec 14 14:42 runtime_log.err
[2025-12-14 15:17:41] -rw------- 1 boinc boinc       665 Dec 14 14:42 QFFKDm8Vao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvKOKDmQW4yHm.diag
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc        26 Dec 14 15:17 wrapper_checkpoint.txt
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc      8192 Dec 14 15:17 boinc_mmap_file
[2025-12-14 15:17:41] -rw-r--r-- 1 boinc boinc     20896 Dec 14 15:17 stderr.txt
[2025-12-14 15:17:41] HITS file was successfully produced:
[2025-12-14 15:17:41] -rw------- 1 boinc boinc 148298022 Dec 14 14:41 shared/HITS.pool.root.1
[2025-12-14 15:17:41]  *** Contents of shared directory: ***
[2025-12-14 15:17:41] total 334416
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc 191393420 Dec 14 11:17 ATLAS.root_0
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc     15847 Dec 14 11:17 start_atlas.sh
[2025-12-14 15:17:41] -rw-r--r-- 2 boinc boinc    592412 Dec 14 11:17 input.tar.gz
[2025-12-14 15:17:41] -rw------- 1 boinc boinc 148298022 Dec 14 14:41 HITS.pool.root.1
[2025-12-14 15:17:41] -rw------- 1 boinc boinc   2129920 Dec 14 14:42 result.tar.gz
15:17:43 (2360762): run_atlas exited; CPU time 47539.972544
15:17:43 (2360762): called boinc_finish(0)

</stderr_txt>
]]>

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