Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:14 (1819048): wrapper (7.7.26015): starting
02:49:14 (1819048): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 02:49:14] Arguments: --nthreads 4
[2025-12-14 02:49:14] Threads: 4
[2025-12-14 02:49:14] Checking for CVMFS
[2025-12-14 02:49:14] No cvmfs_config command found, will try listing directly
[2025-12-14 02:49:14] CVMFS is ok
[2025-12-14 02:49:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 02:49:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 02:49:14] Further information can be found at the LHC@home message board.
[2025-12-14 02:49:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 02:49:14] Checking for apptainer binary...
[2025-12-14 02:49:14] which: no apptainer in ((null))
[2025-12-14 02:49:14] apptainer is not installed, using version from CVMFS
[2025-12-14 02:49:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 02:49:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-14 02:49:14] apptainer works
[2025-12-14 02:49:14] Set ATHENA_PROC_NUMBER=4
[2025-12-14 02:49:14] Set ATHENA_CORE_NUMBER=4
[2025-12-14 02:49:14] Starting ATLAS job with PandaID=6929222140
[2025-12-14 02:49:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 06:46:47]  *** The last 200 lines of the pilot log: ***
[2025-12-14 06:46:47] 2025-12-14 05:44:59,368 | INFO     | maximum number of monitored processes: 6
[2025-12-14 06:46:47] 2025-12-14 05:45:00,456 | INFO     | time since job start (14128s) is within the limit (174528.0s)
[2025-12-14 06:46:47] 2025-12-14 05:45:01,872 | INFO     | monitor loop #962: job 0:6929222140 is in state 'finished'
[2025-12-14 06:46:47] 2025-12-14 05:45:01,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 06:46:47] 2025-12-14 05:45:02,462 | INFO     | time since job start (14130s) is within the limit (174528.0s)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,042 | INFO     | PID=1823127 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,043 | INFO     | .. there are 6 such processes running
[2025-12-14 06:46:47] 2025-12-14 05:45:04,379 | INFO     | monitor loop #963: job 0:6929222140 is in state 'finished'
[2025-12-14 06:46:47] 2025-12-14 05:45:04,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,664 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 06:46:47] 2025-12-14 05:45:04,674 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2526.0473906250004
[2025-12-14 06:46:47] 2025-12-14 05:45:04,688 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6929222140/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,689 | INFO     | extracted standard info from prmon json
[2025-12-14 06:46:47] 2025-12-14 05:45:04,689 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 06:46:47] 2025-12-14 05:45:04,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 06:46:47] 2025-12-14 05:45:04,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 06:46:47] 2025-12-14 05:45:04,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 06:46:47] 2025-12-14 05:45:04,697 | INFO     | fitting pss+swap vs Time
[2025-12-14 06:46:47] 2025-12-14 05:45:04,697 | INFO     | sum of square deviations: 3822131046.995676
[2025-12-14 06:46:47] 2025-12-14 05:45:04,699 | INFO     | sum of deviations: 20728998765.419933
[2025-12-14 06:46:47] 2025-12-14 05:45:04,699 | INFO     | mean x: 1765684022.004329
[2025-12-14 06:46:47] 2025-12-14 05:45:04,699 | INFO     | mean y: 2310692.58008658
[2025-12-14 06:46:47] 2025-12-14 05:45:04,699 | INFO     | intersect: -9573724629.656956
[2025-12-14 06:46:47] 2025-12-14 05:45:04,700 | INFO     | chi2: 1.4505849655105816
[2025-12-14 06:46:47] 2025-12-14 05:45:04,700 | INFO     | sum of square deviations: 3579270984.49558
[2025-12-14 06:46:47] 2025-12-14 05:45:04,701 | INFO     | sum of deviations: 20305761053.725666
[2025-12-14 06:46:47] 2025-12-14 05:45:04,701 | INFO     | mean x: 1765683869.5044248
[2025-12-14 06:46:47] 2025-12-14 05:45:04,702 | INFO     | mean y: 2310426.774336283
[2025-12-14 06:46:47] 2025-12-14 05:45:04,702 | INFO     | intersect: -10014688818.569853
[2025-12-14 06:46:47] 2025-12-14 05:45:04,702 | INFO     | chi2: 1.4513341871429721
[2025-12-14 06:46:47] 2025-12-14 05:45:04,702 | INFO     | current chi2=1.4513341871429721 (change=-0.0516496206843587 %)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,702 | INFO     | right removable region: 225
[2025-12-14 06:46:47] 2025-12-14 05:45:04,703 | INFO     | sum of square deviations: 3579270374.49558
[2025-12-14 06:46:47] 2025-12-14 05:45:04,704 | INFO     | sum of deviations: -10482575039.734518
[2025-12-14 06:46:47] 2025-12-14 05:45:04,704 | INFO     | mean x: 1765684174.5044248
[2025-12-14 06:46:47] 2025-12-14 05:45:04,704 | INFO     | mean y: 2330081.2345132744
[2025-12-14 06:46:47] 2025-12-14 05:45:04,704 | INFO     | intersect: 5173472498.304013
[2025-12-14 06:46:47] 2025-12-14 05:45:04,705 | INFO     | chi2: 0.03504926513951808
[2025-12-14 06:46:47] 2025-12-14 05:45:04,705 | INFO     | current chi2=0.03504926513951808 (change=97.5837840614058 %)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,705 | INFO     | sum of square deviations: 3346921526.995481
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | sum of deviations: -8764948435.393656
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | mean x: 1765684327.004525
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | mean y: 2328941.393665158
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | intersect: 4626319063.226691
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | chi2: 0.03147807210938294
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | current chi2=0.03147807210938294 (change=10.18906677763299 %)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,707 | INFO     | left removable region: 20
[2025-12-14 06:46:47] 2025-12-14 05:45:04,708 | INFO     | sum of square deviations: 2671336522.9951305
[2025-12-14 06:46:47] 2025-12-14 05:45:04,709 | INFO     | sum of deviations: -2394339757.17073
[2025-12-14 06:46:47] 2025-12-14 05:45:04,709 | INFO     | mean x: 1765684449.004878
[2025-12-14 06:46:47] 2025-12-14 05:45:04,709 | INFO     | mean y: 2324559.1707317075
[2025-12-14 06:46:47] 2025-12-14 05:45:04,709 | INFO     | intersect: 1584921299.970124
[2025-12-14 06:46:47] 2025-12-14 05:45:04,710 | INFO     | chi2: 0.018740534961728776
[2025-12-14 06:46:47] 2025-12-14 05:45:04,710 | INFO     | current memory leak: -0.90 B/s (using 205 data points, chi2=0.02)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,710 | INFO     | could have reported an average CPU frequency of 2545 MHz (11 samples)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | ..............................
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . Timing measurements:
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . get job = 0 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . initial setup = 1 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . payload setup = 8 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . stage-in = 0 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . payload execution = 14091 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . stage-out = 1 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | . log creation = 0 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,711 | INFO     | ..............................
[2025-12-14 06:46:47] 2025-12-14 05:45:04,806 | INFO     | 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | job summary report
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | --------------------------------------------------
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | PanDA job id: 6929222140
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | task id: 47886831
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | errors: (none)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | pilot state: finished 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | transexitcode: 0
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | exeerrorcode: 0
[2025-12-14 06:46:47] 2025-12-14 05:45:04,807 | INFO     | exeerrordiag: 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | exitcode: 0
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | exitmsg: OK
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | cpuconsumptiontime: 48417 s
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | nevents: 400
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | neventsw: 0
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | pid: 1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | pgrp: 1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | corecount: 4
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | event service: False
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | sizes: {0: 2284000, 6: 2284262, 11: 2284290, 14104: 2315455, 14105: 2315454, 14106: 2324530, 14107: 2324714, 14116: 2324908}
[2025-12-14 06:46:47] 2025-12-14 05:45:04,808 | INFO     | --------------------------------------------------
[2025-12-14 06:46:47] 2025-12-14 05:45:04,809 | INFO     | 
[2025-12-14 06:46:47] 2025-12-14 05:45:04,809 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 06:46:47] 2025-12-14 05:45:04,834 | INFO     | job 6929222140 has completed (purged errors)
[2025-12-14 06:46:47] 2025-12-14 05:45:04,834 | INFO     | overall cleanup function is called
[2025-12-14 06:46:47] 2025-12-14 05:45:05,841 | INFO     | --- collectZombieJob: --- 10, [1830015]
[2025-12-14 06:46:47] 2025-12-14 05:45:05,842 | INFO     | zombie collector waiting for pid 1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:05,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 06:46:47] 2025-12-14 05:45:05,842 | INFO     | collected zombie processes
[2025-12-14 06:46:47] 2025-12-14 05:45:05,842 | INFO     | will attempt to kill all subprocesses of pid=1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:06,278 | INFO     | process IDs to be killed: [1830015] (in reverse order)
[2025-12-14 06:46:47] 2025-12-14 05:45:06,460 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 06:46:47] 2025-12-14 05:45:06,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 06:46:47] 2025-12-14 05:45:06,485 | INFO     | did not find any defunct processes belonging to 1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:06,504 | INFO     | did not find any defunct processes belonging to 1830015
[2025-12-14 06:46:47] 2025-12-14 05:45:06,505 | INFO     | ready for new job
[2025-12-14 06:46:47] 2025-12-14 05:45:06,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 06:46:47] 2025-12-14 05:45:06,508 | INFO     | ***************************************
[2025-12-14 06:46:47] 2025-12-14 05:45:06,509 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 06:46:47] 2025-12-14 05:45:06,509 | INFO     | ***************************************
[2025-12-14 06:46:47] 2025-12-14 05:45:06,509 | INFO     | 
[2025-12-14 06:46:47] 2025-12-14 05:45:06,519 | INFO     | architecture information:
[2025-12-14 06:46:47] 2025-12-14 05:45:06,519 | INFO     | executing command: cat /etc/os-release
[2025-12-14 06:46:47] 2025-12-14 05:45:06,545 | INFO     | cat /etc/os-release:
[2025-12-14 06:46:47] NAME="CentOS Linux"
[2025-12-14 06:46:47] VERSION="7 (Core)"
[2025-12-14 06:46:47] ID="centos"
[2025-12-14 06:46:47] ID_LIKE="rhel fedora"
[2025-12-14 06:46:47] VERSION_ID="7"
[2025-12-14 06:46:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 06:46:47] ANSI_COLOR="0;31"
[2025-12-14 06:46:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 06:46:47] HOME_URL="https://www.centos.org/"
[2025-12-14 06:46:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 06:46:47] 
[2025-12-14 06:46:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 06:46:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 06:46:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 06:46:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 06:46:47] 
[2025-12-14 06:46:47] 2025-12-14 05:45:06,546 | INFO     | ***************************************
[2025-12-14 06:46:47] 2025-12-14 05:45:07,050 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-12-14 06:46:47] 2025-12-14 05:45:07,074 | INFO     | sufficient remaining disk space (674387460096 B)
[2025-12-14 06:46:47] 2025-12-14 05:45:07,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 06:46:47] 2025-12-14 05:45:07,075 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 06:46:47] 2025-12-14 05:45:07,075 | INFO     | update_server=False
[2025-12-14 06:46:47] 2025-12-14 05:45:07,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 06:46:47] 2025-12-14 05:45:07,075 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 06:46:47] 2025-12-14 05:45:07,720 | INFO     | all data control threads have been joined
[2025-12-14 06:46:47] 2025-12-14 05:45:07,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 06:46:47] 2025-12-14 05:45:07,864 | INFO     | all job control threads have been joined
[2025-12-14 06:46:47] 2025-12-14 05:45:07,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 06:46:47] 2025-12-14 05:45:07,898 | INFO     | aborting loop
[2025-12-14 06:46:47] 2025-12-14 05:45:08,080 | INFO     | [job] retrieve thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,417 | INFO     | [data] copytool_in thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,550 | INFO     | all payload control threads have been joined
[2025-12-14 06:46:47] 2025-12-14 05:45:08,726 | INFO     | [data] control thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,779 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,870 | INFO     | [job] control thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,896 | INFO     | [payload] validate_post thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,903 | INFO     | [job] job monitor thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,921 | INFO     | [job] validate thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:08,932 | INFO     | [payload] failed_post thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:09,105 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:09,227 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:09,556 | INFO     | [payload] control thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:09,792 | INFO     | [data] copytool_out thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:09,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 06:46:47] 2025-12-14 05:45:10,822 | INFO     | [job] queue monitor thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:11,081 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 06:46:47] 2025-12-14 05:45:36,628 | INFO     | PID=1823127 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 06:46:47] 2025-12-14 05:45:36,630 | INFO     | .. there are 6 such processes running
[2025-12-14 06:46:47] 2025-12-14 05:45:36,631 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 06:46:47] 2025-12-14 05:45:36,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 06:46:47] 2025-12-14 05:45:36,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 06:46:47] 2025-12-14 05:45:55,867 | INFO     | [monitor] cgroup control has ended
[2025-12-14 06:46:47] 2025-12-14 05:45:57,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22864809940800)>', '<ExcThread(monitor, started 22864566638336)>']
[2025-12-14 06:46:47] 2025-12-14 05:45:57,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 06:46:47] 2025-12-14 05:45:57,736 | INFO     | [monitor] control thread has ended
[2025-12-14 06:46:47] 2025-12-14 05:46:02,462 | INFO     | all workflow threads have been joined
[2025-12-14 06:46:47] 2025-12-14 05:46:02,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 06:46:47] 2025-12-14 05:46:02,463 | INFO     | traces error code: 0
[2025-12-14 06:46:47] 2025-12-14 05:46:02,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 06:46:47] 2025-12-14 05:46:02,646 [wrapper] ==== pilot stdout END ====
[2025-12-14 06:46:47] 2025-12-14 05:46:02,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 06:46:47] 2025-12-14 05:46:02,655 [wrapper] pilotpid: 1823127
[2025-12-14 06:46:47] 2025-12-14 05:46:02,658 [wrapper] Pilot exit status: 0
[2025-12-14 06:46:47] 2025-12-14 05:46:02,742 [wrapper] pandaids: 6929222140
[2025-12-14 06:46:47] 2025-12-14 05:46:02,857 [wrapper] cleanup supervisor_pilot 2060889 1823128
[2025-12-14 06:46:47] 2025-12-14 05:46:02,860 [wrapper] Test setup, not cleaning
[2025-12-14 06:46:47] 2025-12-14 05:46:02,863 [wrapper] apfmon messages muted
[2025-12-14 06:46:47] 2025-12-14 05:46:02,891 [wrapper] ==== wrapper stdout END ====
[2025-12-14 06:46:47] 2025-12-14 05:46:02,905 [wrapper] ==== wrapper stderr END ====
[2025-12-14 06:46:47]  *** Error codes and diagnostics ***
[2025-12-14 06:46:47]     "exeErrorCode": 0,
[2025-12-14 06:46:47]     "exeErrorDiag": "",
[2025-12-14 06:46:47]     "pilotErrorCode": 0,
[2025-12-14 06:46:47]     "pilotErrorDiag": "",
[2025-12-14 06:46:47]  *** Listing of results directory ***
[2025-12-14 06:46:47] total 344996
[2025-12-14 06:46:47] -rwx------ 1 boinc boinc     36322 Dec 13 09:50 runpilot2-wrapper.sh
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc      5112 Dec 13 09:53 queuedata.json
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc       100 Dec 14 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 06:46:47] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 02:49 run_atlas
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc       105 Dec 14 02:49 job.xml
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc 194447751 Dec 14 02:49 EVNT.47886829._000167.pool.root.1
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc      6638 Dec 14 02:49 init_data.xml
[2025-12-14 06:46:47] drwxrwx--x 2 boinc boinc      4096 Dec 14 02:49 shared
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc    592419 Dec 14 02:49 input.tar.gz
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc     15847 Dec 14 02:49 start_atlas.sh
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc         0 Dec 14 02:49 boinc_lockfile
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc      2537 Dec 14 02:49 pandaJob.out
[2025-12-14 06:46:47] -rw------- 1 boinc boinc    991744 Dec 14 02:49 agis_schedconf.cvmfs.json
[2025-12-14 06:46:47] drwx------ 5 boinc boinc      4096 Dec 14 02:49 pilot3
[2025-12-14 06:46:47] -rw------- 1 boinc boinc 150198478 Dec 14 06:44 HITS.47886831._004172.pool.root.1
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc       528 Dec 14 06:44 boinc_task_state.xml
[2025-12-14 06:46:47] -rw------- 1 boinc boinc      1031 Dec 14 06:44 memory_monitor_summary.json
[2025-12-14 06:46:47] -rw------- 1 boinc boinc   1516240 Dec 14 06:44 agis_ddmendpoints.agis.ALL.json
[2025-12-14 06:46:47] -rw------- 1 boinc boinc    403640 Dec 14 06:44 log.47886831._004172.job.log.tgz.1
[2025-12-14 06:46:47] -rw------- 1 boinc boinc      7820 Dec 14 06:45 heartbeat.json
[2025-12-14 06:46:47] -rw------- 1 boinc boinc        95 Dec 14 06:45 pilot_heartbeat.json
[2025-12-14 06:46:47] -rw------- 1 boinc boinc      4833 Dec 14 06:46 pilotlog.txt
[2025-12-14 06:46:47] -rw------- 1 boinc boinc   1957507 Dec 14 06:46 log.47886831._004172.job.log.1
[2025-12-14 06:46:47] -rw------- 1 boinc boinc       357 Dec 14 06:46 output.list
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc       620 Dec 14 06:46 runtime_log
[2025-12-14 06:46:47] -rw------- 1 boinc boinc   2375680 Dec 14 06:46 result.tar.gz
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc      9206 Dec 14 06:46 runtime_log.err
[2025-12-14 06:46:47] -rw------- 1 boinc boinc       665 Dec 14 06:46 1qPMDm7Vao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxPSKDm458kHm.diag
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc      8192 Dec 14 06:46 boinc_mmap_file
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc        26 Dec 14 06:46 wrapper_checkpoint.txt
[2025-12-14 06:46:47] -rw-r--r-- 1 boinc boinc     21240 Dec 14 06:46 stderr.txt
[2025-12-14 06:46:47] HITS file was successfully produced:
[2025-12-14 06:46:47] -rw------- 1 boinc boinc 150198478 Dec 14 06:44 shared/HITS.pool.root.1
[2025-12-14 06:46:47]  *** Contents of shared directory: ***
[2025-12-14 06:46:47] total 339492
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc 194447751 Dec 14 02:49 ATLAS.root_0
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc    592419 Dec 14 02:49 input.tar.gz
[2025-12-14 06:46:47] -rw-r--r-- 2 boinc boinc     15847 Dec 14 02:49 start_atlas.sh
[2025-12-14 06:46:47] -rw------- 1 boinc boinc 150198478 Dec 14 06:44 HITS.pool.root.1
[2025-12-14 06:46:47] -rw------- 1 boinc boinc   2375680 Dec 14 06:46 result.tar.gz
06:46:49 (1819048): run_atlas exited; CPU time 49115.849719
06:46:49 (1819048): called boinc_finish(0)

</stderr_txt>
]]>

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