Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:19 (3946390): wrapper (7.7.26015): starting
10:20:19 (3946390): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 10:20:19] Arguments: --nthreads 9
[2025-12-13 10:20:19] Threads: 9
[2025-12-13 10:20:19] Checking for CVMFS
[2025-12-13 10:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 10:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 10:20:20] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 10:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 10:20:20] 2.13.2.0 3157737 54930 171640 153965 1 192 23774607 39288832 9408 16776704 0 48503488 99.639 44512441 38259 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 10:20:20] CVMFS is ok
[2025-12-13 10:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 10:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 10:20:20] Further information can be found at the LHC@home message board.
[2025-12-13 10:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 10:20:20] Checking for apptainer binary...
[2025-12-13 10:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 10:20:20] Running /usr/bin/apptainer --version
[2025-12-13 10:20:20] apptainer version 1.4.4-1.el9
[2025-12-13 10:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 10:20:20] c-210-20.aglt2.org
[2025-12-13 10:20:20] apptainer works
[2025-12-13 10:20:20] Set ATHENA_PROC_NUMBER=9
[2025-12-13 10:20:20] Set ATHENA_CORE_NUMBER=9
[2025-12-13 10:20:20] Starting ATLAS job with PandaID=6929221855
[2025-12-13 10:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 17:03:59]  *** The last 200 lines of the pilot log: ***
[2025-12-13 17:03:59] 2025-12-13 22:03:18,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:03:59] 2025-12-13 22:03:19,357 | INFO     | time since job start (24143s) is within the limit (174528.0s)
[2025-12-13 17:03:59] 2025-12-13 22:03:20,881 | INFO     | monitor loop #1475: job 0:6929221855 is in state 'finished'
[2025-12-13 17:03:59] 2025-12-13 22:03:20,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:03:59] 2025-12-13 22:03:21,365 | INFO     | time since job start (24145s) is within the limit (174528.0s)
[2025-12-13 17:03:59] 2025-12-13 22:03:23,372 | INFO     | time since job start (24147s) is within the limit (174528.0s)
[2025-12-13 17:03:59] 2025-12-13 22:03:23,386 | INFO     | monitor loop #1476: job 0:6929221855 is in state 'finished'
[2025-12-13 17:03:59] 2025-12-13 22:03:23,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,266 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 17:03:59] 2025-12-13 22:03:25,277 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1800749999998
[2025-12-13 17:03:59] 2025-12-13 22:03:25,283 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929221855/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,286 | INFO     | extracted standard info from prmon json
[2025-12-13 17:03:59] 2025-12-13 22:03:25,286 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 17:03:59] 2025-12-13 22:03:25,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 17:03:59] 2025-12-13 22:03:25,287 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 17:03:59] 2025-12-13 22:03:25,287 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 17:03:59] 2025-12-13 22:03:25,312 | INFO     | fitting pss+swap vs Time
[2025-12-13 17:03:59] 2025-12-13 22:03:25,313 | INFO     | sum of square deviations: 18966049918.771725
[2025-12-13 17:03:59] 2025-12-13 22:03:25,321 | INFO     | sum of deviations: -109821260159.25885
[2025-12-13 17:03:59] 2025-12-13 22:03:25,321 | INFO     | mean x: 1765651356.0558376
[2025-12-13 17:03:59] 2025-12-13 22:03:25,322 | INFO     | mean y: 2558830.829949239
[2025-12-13 17:03:59] 2025-12-13 22:03:25,322 | INFO     | intersect: 10226409224.265696
[2025-12-13 17:03:59] 2025-12-13 22:03:25,322 | INFO     | chi2: 3.4266831857920903
[2025-12-13 17:03:59] 2025-12-13 22:03:25,324 | INFO     | sum of square deviations: 18253273357.305782
[2025-12-13 17:03:59] 2025-12-13 22:03:25,328 | INFO     | sum of deviations: -82972859953.57336
[2025-12-13 17:03:59] 2025-12-13 22:03:25,328 | INFO     | mean x: 1765651203.570694
[2025-12-13 17:03:59] 2025-12-13 22:03:25,329 | INFO     | mean y: 2564519.4935732647
[2025-12-13 17:03:59] 2025-12-13 22:03:25,329 | INFO     | intersect: 8028584136.522596
[2025-12-13 17:03:59] 2025-12-13 22:03:25,329 | INFO     | chi2: 2.7428449599939704
[2025-12-13 17:03:59] 2025-12-13 22:03:25,330 | INFO     | current chi2=2.7428449599939704 (change=19.956272252815467 %)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,330 | INFO     | right removable region: 388
[2025-12-13 17:03:59] 2025-12-13 22:03:25,330 | INFO     | sum of square deviations: 18252995199.305782
[2025-12-13 17:03:59] 2025-12-13 22:03:25,334 | INFO     | sum of deviations: -195339729616.25458
[2025-12-13 17:03:59] 2025-12-13 22:03:25,335 | INFO     | mean x: 1765651508.570694
[2025-12-13 17:03:59] 2025-12-13 22:03:25,335 | INFO     | mean y: 2577052.6092544985
[2025-12-13 17:03:59] 2025-12-13 22:03:25,335 | INFO     | intersect: 18898209496.201252
[2025-12-13 17:03:59] 2025-12-13 22:03:25,335 | INFO     | chi2: 1.3096127908335902
[2025-12-13 17:03:59] 2025-12-13 22:03:25,336 | INFO     | current chi2=1.3096127908335902 (change=61.78191213405483 %)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,336 | INFO     | sum of square deviations: 17558009988.98952
[2025-12-13 17:03:59] 2025-12-13 22:03:25,340 | INFO     | sum of deviations: -192453833096.55246
[2025-12-13 17:03:59] 2025-12-13 22:03:25,340 | INFO     | mean x: 1765651661.0885417
[2025-12-13 17:03:59] 2025-12-13 22:03:25,341 | INFO     | mean y: 2576400.6927083335
[2025-12-13 17:03:59] 2025-12-13 22:03:25,341 | INFO     | intersect: 19355933091.050816
[2025-12-13 17:03:59] 2025-12-13 22:03:25,341 | INFO     | chi2: 1.2775382165509073
[2025-12-13 17:03:59] 2025-12-13 22:03:25,341 | INFO     | current chi2=1.2775382165509073 (change=2.44916470785742 %)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,342 | INFO     | left removable region: 20
[2025-12-13 17:03:59] 2025-12-13 22:03:25,342 | INFO     | sum of square deviations: 15453493592.25
[2025-12-13 17:03:59] 2025-12-13 22:03:25,346 | INFO     | sum of deviations: -127327196453.37502
[2025-12-13 17:03:59] 2025-12-13 22:03:25,346 | INFO     | mean x: 1765651783.125
[2025-12-13 17:03:59] 2025-12-13 22:03:25,346 | INFO     | mean y: 2573745.8342391304
[2025-12-13 17:03:59] 2025-12-13 22:03:25,346 | INFO     | intersect: 14550448640.023527
[2025-12-13 17:03:59] 2025-12-13 22:03:25,347 | INFO     | chi2: 0.5078459456535112
[2025-12-13 17:03:59] 2025-12-13 22:03:25,347 | INFO     | current memory leak: -8.24 B/s (using 368 data points, chi2=0.51)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,348 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,348 | INFO     | ..............................
[2025-12-13 17:03:59] 2025-12-13 22:03:25,348 | INFO     | . Timing measurements:
[2025-12-13 17:03:59] 2025-12-13 22:03:25,348 | INFO     | . get job = 0 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . initial setup = 6 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . payload setup = 42 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . stage-in = 0 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . payload execution = 24042 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . stage-out = 5 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | . log creation = 0 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,349 | INFO     | ..............................
[2025-12-13 17:03:59] 2025-12-13 22:03:25,414 | INFO     | time since job start (24149s) is within the limit (174528.0s)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,934 | INFO     | 
[2025-12-13 17:03:59] 2025-12-13 22:03:25,935 | INFO     | job summary report
[2025-12-13 17:03:59] 2025-12-13 22:03:25,935 | INFO     | --------------------------------------------------
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | PanDA job id: 6929221855
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | task id: 47886831
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | errors: (none)
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | pilot state: finished 
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | transexitcode: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | exeerrorcode: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | exeerrordiag: 
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | exitcode: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:25,936 | INFO     | exitmsg: OK
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | cpuconsumptiontime: 53296 s
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | nevents: 400
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | neventsw: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | pid: 3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | pgrp: 3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | corecount: 9
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | event service: False
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | sizes: {0: 2283818, 1: 2284017, 12: 2284017, 15: 2284307, 24: 2284335, 24089: 2319290, 24090: 2319417, 24095: 2328471, 24097: 2328527, 24116: 2328785}
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | --------------------------------------------------
[2025-12-13 17:03:59] 2025-12-13 22:03:25,937 | INFO     | 
[2025-12-13 17:03:59] 2025-12-13 22:03:25,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 17:03:59] 2025-12-13 22:03:26,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 17:03:59] 2025-12-13 22:03:26,159 | INFO     | job 6929221855 has completed (purged errors)
[2025-12-13 17:03:59] 2025-12-13 22:03:26,159 | INFO     | overall cleanup function is called
[2025-12-13 17:03:59] 2025-12-13 22:03:27,202 | INFO     | --- collectZombieJob: --- 10, [3959375]
[2025-12-13 17:03:59] 2025-12-13 22:03:27,202 | INFO     | zombie collector waiting for pid 3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:27,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 17:03:59] 2025-12-13 22:03:27,203 | INFO     | collected zombie processes
[2025-12-13 17:03:59] 2025-12-13 22:03:27,203 | INFO     | will attempt to kill all subprocesses of pid=3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:27,703 | INFO     | process IDs to be killed: [3959375] (in reverse order)
[2025-12-13 17:03:59] 2025-12-13 22:03:27,777 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 17:03:59] 2025-12-13 22:03:27,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 17:03:59] 2025-12-13 22:03:27,786 | INFO     | did not find any defunct processes belonging to 3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:27,794 | INFO     | did not find any defunct processes belonging to 3959375
[2025-12-13 17:03:59] 2025-12-13 22:03:27,794 | INFO     | ready for new job
[2025-12-13 17:03:59] 2025-12-13 22:03:27,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 17:03:59] 2025-12-13 22:03:27,798 | INFO     | ***************************************
[2025-12-13 17:03:59] 2025-12-13 22:03:27,798 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 17:03:59] 2025-12-13 22:03:27,798 | INFO     | ***************************************
[2025-12-13 17:03:59] 2025-12-13 22:03:27,798 | INFO     | 
[2025-12-13 17:03:59] 2025-12-13 22:03:27,800 | INFO     | architecture information:
[2025-12-13 17:03:59] 2025-12-13 22:03:27,800 | INFO     | executing command: cat /etc/os-release
[2025-12-13 17:03:59] 2025-12-13 22:03:27,822 | INFO     | cat /etc/os-release:
[2025-12-13 17:03:59] NAME="CentOS Linux"
[2025-12-13 17:03:59] VERSION="7 (Core)"
[2025-12-13 17:03:59] ID="centos"
[2025-12-13 17:03:59] ID_LIKE="rhel fedora"
[2025-12-13 17:03:59] VERSION_ID="7"
[2025-12-13 17:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 17:03:59] ANSI_COLOR="0;31"
[2025-12-13 17:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 17:03:59] HOME_URL="https://www.centos.org/"
[2025-12-13 17:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 17:03:59] 
[2025-12-13 17:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 17:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 17:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 17:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 17:03:59] 
[2025-12-13 17:03:59] 2025-12-13 22:03:27,823 | INFO     | ***************************************
[2025-12-13 17:03:59] 2025-12-13 22:03:28,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 17:03:59] 2025-12-13 22:03:28,532 | INFO     | sufficient remaining disk space (53103034368 B)
[2025-12-13 17:03:59] 2025-12-13 22:03:28,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 17:03:59] 2025-12-13 22:03:28,532 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 17:03:59] 2025-12-13 22:03:28,532 | INFO     | update_server=False
[2025-12-13 17:03:59] 2025-12-13 22:03:28,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 17:03:59] 2025-12-13 22:03:28,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 17:03:59] 2025-12-13 22:03:28,584 | INFO     | all payload control threads have been joined
[2025-12-13 17:03:59] 2025-12-13 22:03:28,718 | INFO     | all data control threads have been joined
[2025-12-13 17:03:59] 2025-12-13 22:03:29,417 | INFO     | all job control threads have been joined
[2025-12-13 17:03:59] 2025-12-13 22:03:29,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:03:59] 2025-12-13 22:03:29,513 | INFO     | aborting loop
[2025-12-13 17:03:59] 2025-12-13 22:03:29,538 | INFO     | [job] retrieve thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:29,590 | INFO     | [payload] control thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:29,611 | INFO     | [payload] validate_post thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:29,612 | INFO     | [payload] failed_post thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:29,724 | INFO     | [data] control thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,423 | INFO     | [job] control thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,519 | INFO     | [job] job monitor thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,540 | INFO     | [data] copytool_out thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 17:03:59] 2025-12-13 22:03:30,549 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,565 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,584 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,584 | INFO     | [job] validate thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,585 | INFO     | [data] copytool_in thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,596 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:30,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 17:03:59] 2025-12-13 22:03:31,546 | INFO     | [job] queue monitor thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:34,667 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 17:03:59] 2025-12-13 22:03:40,860 | INFO     | [monitor] cgroup control has ended
[2025-12-13 17:03:59] 2025-12-13 22:03:42,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741327947584)>', '<ExcThread(monitor, started 139740837828352)>']
[2025-12-13 17:03:59] 2025-12-13 22:03:47,720 | INFO     | all workflow threads have been joined
[2025-12-13 17:03:59] 2025-12-13 22:03:47,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 17:03:59] 2025-12-13 22:03:47,721 | INFO     | traces error code: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:47,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 17:03:59] 2025-12-13 22:03:58,953 | INFO     | PID=3950105 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | INFO     | .. there are 7 such processes running
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 17:03:59] 2025-12-13 22:03:58,954 | INFO     | [monitor] control thread has ended
[2025-12-13 17:03:59] 2025-12-13 22:03:59,544 [wrapper] ==== pilot stdout END ====
[2025-12-13 17:03:59] 2025-12-13 22:03:59,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 17:03:59] 2025-12-13 22:03:59,549 [wrapper] pilotpid: 3950105
[2025-12-13 17:03:59] 2025-12-13 22:03:59,551 [wrapper] Pilot exit status: 0
[2025-12-13 17:03:59] 2025-12-13 22:03:59,563 [wrapper] pandaids: 6929221855
[2025-12-13 17:03:59] 2025-12-13 22:03:59,608 [wrapper] cleanup supervisor_pilot  217138 3950106
[2025-12-13 17:03:59] 2025-12-13 22:03:59,610 [wrapper] Test setup, not cleaning
[2025-12-13 17:03:59] 2025-12-13 22:03:59,613 [wrapper] apfmon messages muted
[2025-12-13 17:03:59] 2025-12-13 22:03:59,615 [wrapper] ==== wrapper stdout END ====
[2025-12-13 17:03:59] 2025-12-13 22:03:59,618 [wrapper] ==== wrapper stderr END ====
[2025-12-13 17:03:59]  *** Error codes and diagnostics ***
[2025-12-13 17:03:59]     "exeErrorCode": 0,
[2025-12-13 17:03:59]     "exeErrorDiag": "",
[2025-12-13 17:03:59]     "pilotErrorCode": 0,
[2025-12-13 17:03:59]     "pilotErrorDiag": "",
[2025-12-13 17:03:59]  *** Listing of results directory ***
[2025-12-13 17:03:59] total 346612
[2025-12-13 17:03:59] -rwx------. 1 boincer umatlas     36322 Dec 13 03:50 runpilot2-wrapper.sh
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 03:53 queuedata.json
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas       100 Dec 13 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 17:03:59] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 10:20 run_atlas
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas       105 Dec 13 10:20 job.xml
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas 194387187 Dec 13 10:20 EVNT.47886829._000157.pool.root.1
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 10:20 start_atlas.sh
[2025-12-13 17:03:59] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 10:20 shared
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas    592413 Dec 13 10:20 input.tar.gz
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas         0 Dec 13 10:20 boinc_lockfile
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas      2537 Dec 13 10:20 pandaJob.out
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas        57 Dec 13 10:20 setup.sh.local
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas    991736 Dec 13 10:20 agis_schedconf.cvmfs.json
[2025-12-13 17:03:59] drwx------. 5 boincer umatlas      4096 Dec 13 10:20 pilot3
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas 149376816 Dec 13 17:01 HITS.47886831._003930.pool.root.1
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas       531 Dec 13 17:01 boinc_task_state.xml
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas      6659 Dec 13 17:02 init_data.xml
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas      1042 Dec 13 17:02 memory_monitor_summary.json
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas   1516240 Dec 13 17:03 agis_ddmendpoints.agis.ALL.json
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas    609526 Dec 13 17:03 log.47886831._003930.job.log.tgz.1
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas        95 Dec 13 17:03 pilot_heartbeat.json
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas      7823 Dec 13 17:03 heartbeat.json
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas        28 Dec 13 17:03 wrapper_checkpoint.txt
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 17:03 boinc_mmap_file
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas       822 Dec 13 17:03 pilotlog.txt
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas   3021291 Dec 13 17:03 log.47886831._003930.job.log.1
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas       357 Dec 13 17:03 output.list
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas       620 Dec 13 17:03 runtime_log
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas   3645440 Dec 13 17:03 result.tar.gz
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 17:03 runtime_log.err
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas       656 Dec 13 17:03 aB3KDmvVao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJPSKDmRg9PMn.diag
[2025-12-13 17:03:59] -rw-r--r--. 1 boincer umatlas     21447 Dec 13 17:03 stderr.txt
[2025-12-13 17:03:59] HITS file was successfully produced:
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas 149376816 Dec 13 17:01 shared/HITS.pool.root.1
[2025-12-13 17:03:59]  *** Contents of shared directory: ***
[2025-12-13 17:03:59] total 339868
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas 194387187 Dec 13 10:20 ATLAS.root_0
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 10:20 start_atlas.sh
[2025-12-13 17:03:59] -rw-r--r--. 2 boincer umatlas    592413 Dec 13 10:20 input.tar.gz
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas 149376816 Dec 13 17:01 HITS.pool.root.1
[2025-12-13 17:03:59] -rw-------. 1 boincer umatlas   3645440 Dec 13 17:03 result.tar.gz
17:04:01 (3946390): run_atlas exited; CPU time 53722.848158
17:04:01 (3946390): called boinc_finish(0)

</stderr_txt>
]]>

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