Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:08 (18214): wrapper (7.7.26015): starting
09:40:08 (18214): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 09:40:08] Arguments: --nthreads 8
[2025-12-13 09:40:08] Threads: 8
[2025-12-13 09:40:08] Checking for CVMFS
[2025-12-13 09:40:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:40:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:40:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:40:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:40:09] 2.11.2.0 2850 60406 85348 153963 2 57 14092936 20275200 1 130560 0 11442588 99.663 4665302 22474 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 09:40:09] CVMFS is ok
[2025-12-13 09:40:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:40:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:40:09] Further information can be found at the LHC@home message board.
[2025-12-13 09:40:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:40:09] Checking for apptainer binary...
[2025-12-13 09:40:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:40:09] Running /usr/bin/apptainer --version
[2025-12-13 09:40:09] apptainer version 1.3.2-1.el7
[2025-12-13 09:40:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:40:11] c-204-4.aglt2.org
[2025-12-13 09:40:11] apptainer works
[2025-12-13 09:40:11] Set ATHENA_PROC_NUMBER=8
[2025-12-13 09:40:11] Set ATHENA_CORE_NUMBER=8
[2025-12-13 09:40:11] Starting ATLAS job with PandaID=6929222134
[2025-12-13 09:40:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 11:55:46]  *** The last 200 lines of the pilot log: ***
[2025-12-13 11:55:46] 2025-12-13 16:54:57,613 | INFO     | executing command: lscpu
[2025-12-13 11:55:46] 2025-12-13 16:54:57,641 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 11:55:46] 2025-12-13 16:54:58,072 | INFO     | time since job start (8070s) is within the limit (174528.0s)
[2025-12-13 11:55:46] 2025-12-13 16:54:58,665 | INFO     | monitor loop #595: job 0:6929222134 is in state 'finished'
[2025-12-13 11:55:46] 2025-12-13 16:54:58,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 11:55:46] 2025-12-13 16:55:00,078 | INFO     | time since job start (8072s) is within the limit (174528.0s)
[2025-12-13 11:55:46] 2025-12-13 16:55:01,169 | INFO     | monitor loop #596: job 0:6929222134 is in state 'finished'
[2025-12-13 11:55:46] 2025-12-13 16:55:01,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 11:55:46] 2025-12-13 16:55:02,083 | INFO     | time since job start (8074s) is within the limit (174528.0s)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,328 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 11:55:46] 2025-12-13 16:55:03,331 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-12-13 11:55:46] 2025-12-13 16:55:03,334 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929222134/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,335 | INFO     | extracted standard info from prmon json
[2025-12-13 11:55:46] 2025-12-13 16:55:03,335 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 11:55:46] 2025-12-13 16:55:03,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 11:55:46] 2025-12-13 16:55:03,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 11:55:46] 2025-12-13 16:55:03,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 11:55:46] 2025-12-13 16:55:03,339 | INFO     | fitting pss+swap vs Time
[2025-12-13 11:55:46] 2025-12-13 16:55:03,339 | INFO     | sum of square deviations: 713140813.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,340 | INFO     | sum of deviations: 3836224394.5000014
[2025-12-13 11:55:46] 2025-12-13 16:55:03,340 | INFO     | mean x: 1765640855.5
[2025-12-13 11:55:46] 2025-12-13 16:55:03,340 | INFO     | mean y: 2502007.977272727
[2025-12-13 11:55:46] 2025-12-13 16:55:03,341 | INFO     | intersect: -9495474265.882338
[2025-12-13 11:55:46] 2025-12-13 16:55:03,341 | INFO     | chi2: 1.5407173879005336
[2025-12-13 11:55:46] 2025-12-13 16:55:03,341 | INFO     | sum of square deviations: 635130048.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,342 | INFO     | sum of deviations: 3827316961.0000005
[2025-12-13 11:55:46] 2025-12-13 16:55:03,342 | INFO     | mean x: 1765640703.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,342 | INFO     | mean y: 2501990.559055118
[2025-12-13 11:55:46] 2025-12-13 16:55:03,342 | INFO     | intersect: -10637313636.025604
[2025-12-13 11:55:46] 2025-12-13 16:55:03,343 | INFO     | chi2: 1.5422605034926566
[2025-12-13 11:55:46] 2025-12-13 16:55:03,343 | INFO     | current chi2=1.5422605034926566 (change=-0.10015565503715064 %)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,343 | INFO     | right removable region: 126
[2025-12-13 11:55:46] 2025-12-13 16:55:03,343 | INFO     | sum of square deviations: 635130048.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,344 | INFO     | sum of deviations: -15195445870.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,344 | INFO     | mean x: 1765641008.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,344 | INFO     | mean y: 2538535.1338582677
[2025-12-13 11:55:46] 2025-12-13 16:55:03,344 | INFO     | intersect: 42245386983.89161
[2025-12-13 11:55:46] 2025-12-13 16:55:03,345 | INFO     | chi2: 0.11580584380712977
[2025-12-13 11:55:46] 2025-12-13 16:55:03,345 | INFO     | current chi2=0.11580584380712977 (change=92.48364140519418 %)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,345 | INFO     | sum of square deviations: 563026370.5
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | sum of deviations: -12851409545.000004
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | mean x: 1765641160.5
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | mean y: 2533491.3278688523
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | intersect: 40304336127.932045
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | chi2: 0.10460005076901303
[2025-12-13 11:55:46] 2025-12-13 16:55:03,346 | INFO     | current chi2=0.10460005076901303 (change=9.67636232311347 %)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,347 | INFO     | left removable region: 20
[2025-12-13 11:55:46] 2025-12-13 16:55:03,347 | INFO     | sum of square deviations: 369281342.5
[2025-12-13 11:55:46] 2025-12-13 16:55:03,347 | INFO     | sum of deviations: -4315596341.0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,347 | INFO     | mean x: 1765641282.5
[2025-12-13 11:55:46] 2025-12-13 16:55:03,348 | INFO     | mean y: 2514143.3018867923
[2025-12-13 11:55:46] 2025-12-13 16:55:03,348 | INFO     | intersect: 20636632852.60426
[2025-12-13 11:55:46] 2025-12-13 16:55:03,348 | INFO     | chi2: 0.061013077823552204
[2025-12-13 11:55:46] 2025-12-13 16:55:03,348 | INFO     | current memory leak: -11.69 B/s (using 106 data points, chi2=0.06)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,348 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | ..............................
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . Timing measurements:
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . get job = 0 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . initial setup = 2 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . payload setup = 8 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . stage-in = 0 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . payload execution = 8037 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,349 | INFO     | . stage-out = 0 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,350 | INFO     | . log creation = 0 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,350 | INFO     | ..............................
[2025-12-13 11:55:46] 2025-12-13 16:55:03,439 | INFO     | 
[2025-12-13 11:55:46] 2025-12-13 16:55:03,439 | INFO     | job summary report
[2025-12-13 11:55:46] 2025-12-13 16:55:03,439 | INFO     | --------------------------------------------------
[2025-12-13 11:55:46] 2025-12-13 16:55:03,439 | INFO     | PanDA job id: 6929222134
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | task id: 47886831
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | errors: (none)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | pilot state: finished 
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | transexitcode: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,440 | INFO     | exeerrorcode: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,441 | INFO     | exeerrordiag: 
[2025-12-13 11:55:46] 2025-12-13 16:55:03,441 | INFO     | exitcode: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,441 | INFO     | exitmsg: OK
[2025-12-13 11:55:46] 2025-12-13 16:55:03,441 | INFO     | cpuconsumptiontime: 60161 s
[2025-12-13 11:55:46] 2025-12-13 16:55:03,441 | INFO     | nevents: 400
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | neventsw: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | pid: 28270
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | pgrp: 28270
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | corecount: 8
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | event service: False
[2025-12-13 11:55:46] 2025-12-13 16:55:03,442 | INFO     | sizes: {0: 2283989, 1: 2283989, 6: 2284279, 11: 2284307, 8049: 2312010, 8050: 2321192, 8058: 2321330}
[2025-12-13 11:55:46] 2025-12-13 16:55:03,443 | INFO     | --------------------------------------------------
[2025-12-13 11:55:46] 2025-12-13 16:55:03,443 | INFO     | 
[2025-12-13 11:55:46] 2025-12-13 16:55:03,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 11:55:46] 2025-12-13 16:55:03,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,472 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 11:55:46] 2025-12-13 16:55:03,475 | INFO     | job 6929222134 has completed (purged errors)
[2025-12-13 11:55:46] 2025-12-13 16:55:03,476 | INFO     | overall cleanup function is called
[2025-12-13 11:55:46] 2025-12-13 16:55:04,481 | INFO     | --- collectZombieJob: --- 10, [28270]
[2025-12-13 11:55:46] 2025-12-13 16:55:04,481 | INFO     | zombie collector waiting for pid 28270
[2025-12-13 11:55:46] 2025-12-13 16:55:04,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 11:55:46] 2025-12-13 16:55:04,482 | INFO     | collected zombie processes
[2025-12-13 11:55:46] 2025-12-13 16:55:04,482 | INFO     | will attempt to kill all subprocesses of pid=28270
[2025-12-13 11:55:46] 2025-12-13 16:55:04,571 | INFO     | process IDs to be killed: [28270] (in reverse order)
[2025-12-13 11:55:46] 2025-12-13 16:55:04,628 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 11:55:46] 2025-12-13 16:55:04,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 11:55:46] 2025-12-13 16:55:04,633 | INFO     | did not find any defunct processes belonging to 28270
[2025-12-13 11:55:46] 2025-12-13 16:55:04,637 | INFO     | did not find any defunct processes belonging to 28270
[2025-12-13 11:55:46] 2025-12-13 16:55:04,637 | INFO     | ready for new job
[2025-12-13 11:55:46] 2025-12-13 16:55:04,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 11:55:46] 2025-12-13 16:55:04,639 | INFO     | ***************************************
[2025-12-13 11:55:46] 2025-12-13 16:55:04,639 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 11:55:46] 2025-12-13 16:55:04,639 | INFO     | ***************************************
[2025-12-13 11:55:46] 2025-12-13 16:55:04,639 | INFO     | 
[2025-12-13 11:55:46] 2025-12-13 16:55:04,640 | INFO     | architecture information:
[2025-12-13 11:55:46] 2025-12-13 16:55:04,641 | INFO     | executing command: cat /etc/os-release
[2025-12-13 11:55:46] 2025-12-13 16:55:04,657 | INFO     | cat /etc/os-release:
[2025-12-13 11:55:46] NAME="CentOS Linux"
[2025-12-13 11:55:46] VERSION="7 (Core)"
[2025-12-13 11:55:46] ID="centos"
[2025-12-13 11:55:46] ID_LIKE="rhel fedora"
[2025-12-13 11:55:46] VERSION_ID="7"
[2025-12-13 11:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 11:55:46] ANSI_COLOR="0;31"
[2025-12-13 11:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 11:55:46] HOME_URL="https://www.centos.org/"
[2025-12-13 11:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 11:55:46] 
[2025-12-13 11:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 11:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 11:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 11:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 11:55:46] 
[2025-12-13 11:55:46] 2025-12-13 16:55:04,658 | INFO     | ***************************************
[2025-12-13 11:55:46] 2025-12-13 16:55:05,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 11:55:46] 2025-12-13 16:55:05,179 | INFO     | sufficient remaining disk space (18669895680 B)
[2025-12-13 11:55:46] 2025-12-13 16:55:05,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 11:55:46] 2025-12-13 16:55:05,180 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 11:55:46] 2025-12-13 16:55:05,180 | INFO     | update_server=False
[2025-12-13 11:55:46] 2025-12-13 16:55:05,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 11:55:46] 2025-12-13 16:55:05,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:55:46] 2025-12-13 16:55:05,181 | INFO     | aborting loop
[2025-12-13 11:55:46] 2025-12-13 16:55:05,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:55:46] 2025-12-13 16:55:05,731 | INFO     | all data control threads have been joined
[2025-12-13 11:55:46] 2025-12-13 16:55:06,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 11:55:46] 2025-12-13 16:55:06,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 11:55:46] 2025-12-13 16:55:06,182 | INFO     | [job] retrieve thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:06,182 | INFO     | [job] job monitor thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:06,184 | INFO     | [job] queue monitor thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:06,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:06,623 | INFO     | all payload control threads have been joined
[2025-12-13 11:55:46] 2025-12-13 16:55:06,735 | INFO     | [data] control thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:06,856 | INFO     | all job control threads have been joined
[2025-12-13 11:55:46] 2025-12-13 16:55:06,877 | INFO     | [payload] validate_post thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,313 | INFO     | [job] validate thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,343 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,373 | INFO     | [data] copytool_in thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,437 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,595 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,629 | INFO     | [payload] control thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,760 | INFO     | [payload] failed_post thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:07,862 | INFO     | [job] control thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:08,087 | INFO     | [data] copytool_out thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:10,167 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 11:55:46] 2025-12-13 16:55:26,367 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-12-13 11:55:46] 2025-12-13 16:55:35,293 | INFO     | PID=21884 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 11:55:46] 2025-12-13 16:55:35,294 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 11:55:46] 2025-12-13 16:55:35,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 11:55:46] 2025-12-13 16:55:35,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 11:55:46] 2025-12-13 16:55:41,246 | INFO     | [monitor] cgroup control has ended
[2025-12-13 11:55:46] 2025-12-13 16:55:41,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630923880256)>', '<ExcThread(monitor, started 140629979952896)>']
[2025-12-13 11:55:46] 2025-12-13 16:55:42,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 11:55:46] 2025-12-13 16:55:42,319 | INFO     | [monitor] control thread has ended
[2025-12-13 11:55:46] 2025-12-13 16:55:46,450 | INFO     | all workflow threads have been joined
[2025-12-13 11:55:46] 2025-12-13 16:55:46,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 11:55:46] 2025-12-13 16:55:46,450 | INFO     | traces error code: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:46,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 11:55:46] 2025-12-13 16:55:46,560 [wrapper] ==== pilot stdout END ====
[2025-12-13 11:55:46] 2025-12-13 16:55:46,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 11:55:46] 2025-12-13 16:55:46,570 [wrapper] pilotpid: 21884
[2025-12-13 11:55:46] 2025-12-13 16:55:46,574 [wrapper] Pilot exit status: 0
[2025-12-13 11:55:46] 2025-12-13 16:55:46,592 [wrapper] pandaids: 6929222134
[2025-12-13 11:55:46] 2025-12-13 16:55:46,638 [wrapper] cleanup supervisor_pilot 32567 21885
[2025-12-13 11:55:46] 2025-12-13 16:55:46,643 [wrapper] Test setup, not cleaning
[2025-12-13 11:55:46] 2025-12-13 16:55:46,648 [wrapper] apfmon messages muted
[2025-12-13 11:55:46] 2025-12-13 16:55:46,653 [wrapper] ==== wrapper stdout END ====
[2025-12-13 11:55:46] 2025-12-13 16:55:46,658 [wrapper] ==== wrapper stderr END ====
[2025-12-13 11:55:46]  *** Error codes and diagnostics ***
[2025-12-13 11:55:46]     "exeErrorCode": 0,
[2025-12-13 11:55:46]     "exeErrorDiag": "",
[2025-12-13 11:55:46]     "pilotErrorCode": 0,
[2025-12-13 11:55:46]     "pilotErrorDiag": "",
[2025-12-13 11:55:46]  *** Listing of results directory ***
[2025-12-13 11:55:46] total 343188
[2025-12-13 11:55:46] -rwx------ 1 boincer umatlas     36322 Dec 13 03:50 runpilot2-wrapper.sh
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:53 queuedata.json
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas       100 Dec 13 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 11:55:46] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 09:40 run_atlas
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas       105 Dec 13 09:40 job.xml
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas 194447751 Dec 13 09:40 EVNT.47886829._000167.pool.root.1
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:40 start_atlas.sh
[2025-12-13 11:55:46] drwxrwx--x 2 boincer umatlas      4096 Dec 13 09:40 shared
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas    592415 Dec 13 09:40 input.tar.gz
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas         0 Dec 13 09:40 boinc_lockfile
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas      2537 Dec 13 09:40 pandaJob.out
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas        57 Dec 13 09:40 setup.sh.local
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas    991736 Dec 13 09:40 agis_schedconf.cvmfs.json
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas   1516240 Dec 13 09:40 agis_ddmendpoints.agis.ALL.json
[2025-12-13 11:55:46] drwx------ 5 boincer umatlas      4096 Dec 13 09:40 pilot3
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas 150051560 Dec 13 11:54 HITS.47886831._004166.pool.root.1
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas       530 Dec 13 11:54 boinc_task_state.xml
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas      5909 Dec 13 11:54 init_data.xml
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas      1048 Dec 13 11:54 memory_monitor_summary.json
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas    372157 Dec 13 11:54 log.47886831._004166.job.log.tgz.1
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas      7834 Dec 13 11:55 heartbeat.json
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 11:55 boinc_mmap_file
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas        27 Dec 13 11:55 wrapper_checkpoint.txt
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas        95 Dec 13 11:55 pilot_heartbeat.json
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas      4746 Dec 13 11:55 pilotlog.txt
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas   1130989 Dec 13 11:55 log.47886831._004166.job.log.1
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas       357 Dec 13 11:55 output.list
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas       620 Dec 13 11:55 runtime_log
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas   1525760 Dec 13 11:55 result.tar.gz
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas      9337 Dec 13 11:55 runtime_log.err
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas       659 Dec 13 11:55 GvIMDm7Vao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrPSKDmcSD0ym.diag
[2025-12-13 11:55:46] -rw-r--r-- 1 boincer umatlas     21330 Dec 13 11:55 stderr.txt
[2025-12-13 11:55:46] HITS file was successfully produced:
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas 150051560 Dec 13 11:54 shared/HITS.pool.root.1
[2025-12-13 11:55:46]  *** Contents of shared directory: ***
[2025-12-13 11:55:46] total 338516
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas 194447751 Dec 13 09:40 ATLAS.root_0
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:40 start_atlas.sh
[2025-12-13 11:55:46] -rw-r--r-- 2 boincer umatlas    592415 Dec 13 09:40 input.tar.gz
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas 150051560 Dec 13 11:54 HITS.pool.root.1
[2025-12-13 11:55:46] -rw------- 1 boincer umatlas   1525760 Dec 13 11:55 result.tar.gz
11:55:47 (18214): run_atlas exited; CPU time 60117.355558
11:55:47 (18214): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN