Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:41 (8412): wrapper (7.7.26015): starting
09:35:41 (8412): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 09:35:41] Arguments: --nthreads 8
[2025-12-13 09:35:41] Threads: 8
[2025-12-13 09:35:41] Checking for CVMFS
[2025-12-13 09:35:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:35:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:35:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:35:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:35:42] 2.11.2.0 2797 90322 81284 153963 2 56 12748694 20275201 1 130560 0 22772360 99.850 5201644 31793 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 09:35:42] CVMFS is ok
[2025-12-13 09:35:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:35:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:35:42] Further information can be found at the LHC@home message board.
[2025-12-13 09:35:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:35:42] Checking for apptainer binary...
[2025-12-13 09:35:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:35:42] Running /usr/bin/apptainer --version
[2025-12-13 09:35:42] apptainer version 1.3.2-1.el7
[2025-12-13 09:35:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:35:44] c-204-11.aglt2.org
[2025-12-13 09:35:44] apptainer works
[2025-12-13 09:35:44] Set ATHENA_PROC_NUMBER=8
[2025-12-13 09:35:44] Set ATHENA_CORE_NUMBER=8
[2025-12-13 09:35:44] Starting ATLAS job with PandaID=6929221928
[2025-12-13 09:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 11:52:20]  *** The last 200 lines of the pilot log: ***
[2025-12-13 11:52:20] 2025-12-13 16:51:34,243 | INFO     | executing command: lscpu
[2025-12-13 11:52:20] 2025-12-13 16:51:34,271 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 11:52:20] 2025-12-13 16:51:34,710 | INFO     | time since job start (8133s) is within the limit (174528.0s)
[2025-12-13 11:52:20] 2025-12-13 16:51:35,714 | INFO     | monitor loop #597: job 0:6929221928 is in state 'finished'
[2025-12-13 11:52:20] 2025-12-13 16:51:35,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 11:52:20] 2025-12-13 16:51:36,715 | INFO     | time since job start (8135s) is within the limit (174528.0s)
[2025-12-13 11:52:20] 2025-12-13 16:51:38,217 | INFO     | monitor loop #598: job 0:6929221928 is in state 'finished'
[2025-12-13 11:52:20] 2025-12-13 16:51:38,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 11:52:20] 2025-12-13 16:51:38,720 | INFO     | time since job start (8137s) is within the limit (174528.0s)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,282 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 11:52:20] 2025-12-13 16:51:39,293 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1812.25
[2025-12-13 11:52:20] 2025-12-13 16:51:39,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929221928/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,295 | INFO     | extracted standard info from prmon json
[2025-12-13 11:52:20] 2025-12-13 16:51:39,296 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 11:52:20] 2025-12-13 16:51:39,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 11:52:20] 2025-12-13 16:51:39,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 11:52:20] 2025-12-13 16:51:39,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 11:52:20] 2025-12-13 16:51:39,299 | INFO     | fitting pss+swap vs Time
[2025-12-13 11:52:20] 2025-12-13 16:51:39,299 | INFO     | sum of square deviations: 729472282.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,300 | INFO     | sum of deviations: 3416715957.000002
[2025-12-13 11:52:20] 2025-12-13 16:51:39,300 | INFO     | mean x: 1765640619.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,300 | INFO     | mean y: 2490872.661654135
[2025-12-13 11:52:20] 2025-12-13 16:51:39,300 | INFO     | intersect: -8267449776.385051
[2025-12-13 11:52:20] 2025-12-13 16:51:39,301 | INFO     | chi2: 1.560404099808142
[2025-12-13 11:52:20] 2025-12-13 16:51:39,301 | INFO     | sum of square deviations: 650252192.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | sum of deviations: 3353552409.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | mean x: 1765640466.5
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | mean y: 2490751.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | intersect: -9103465234.549309
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | chi2: 1.561618928138645
[2025-12-13 11:52:20] 2025-12-13 16:51:39,302 | INFO     | current chi2=1.561618928138645 (change=-0.07785344390291411 %)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,303 | INFO     | right removable region: 127
[2025-12-13 11:52:20] 2025-12-13 16:51:39,303 | INFO     | sum of square deviations: 650252192.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,303 | INFO     | sum of deviations: -15632008443.5
[2025-12-13 11:52:20] 2025-12-13 16:51:39,304 | INFO     | mean x: 1765640771.5
[2025-12-13 11:52:20] 2025-12-13 16:51:39,304 | INFO     | mean y: 2526874.9453125
[2025-12-13 11:52:20] 2025-12-13 16:51:39,304 | INFO     | intersect: 42448383709.94366
[2025-12-13 11:52:20] 2025-12-13 16:51:39,304 | INFO     | chi2: 0.1333632953626732
[2025-12-13 11:52:20] 2025-12-13 16:51:39,304 | INFO     | current chi2=0.1333632953626732 (change=91.45328473700687 %)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,305 | INFO     | sum of square deviations: 576985702.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,305 | INFO     | sum of deviations: -14507656839.999998
[2025-12-13 11:52:20] 2025-12-13 16:51:39,305 | INFO     | mean x: 1765640924.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,305 | INFO     | mean y: 2524422.5447154474
[2025-12-13 11:52:20] 2025-12-13 16:51:39,306 | INFO     | intersect: 44397580555.23987
[2025-12-13 11:52:20] 2025-12-13 16:51:39,306 | INFO     | chi2: 0.118416998639998
[2025-12-13 11:52:20] 2025-12-13 16:51:39,306 | INFO     | current chi2=0.118416998639998 (change=11.207204112668084 %)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,306 | INFO     | left removable region: 20
[2025-12-13 11:52:20] 2025-12-13 16:51:39,306 | INFO     | sum of square deviations: 379832238.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,307 | INFO     | sum of deviations: -6303101086.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,307 | INFO     | mean x: 1765641046.0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,307 | INFO     | mean y: 2506242.551401869
[2025-12-13 11:52:20] 2025-12-13 16:51:39,307 | INFO     | intersect: 29302320426.64595
[2025-12-13 11:52:20] 2025-12-13 16:51:39,307 | INFO     | chi2: 0.08489780824707395
[2025-12-13 11:52:20] 2025-12-13 16:51:39,308 | INFO     | current memory leak: -16.59 B/s (using 107 data points, chi2=0.08)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,308 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,308 | INFO     | ..............................
[2025-12-13 11:52:20] 2025-12-13 16:51:39,308 | INFO     | . Timing measurements:
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . get job = 0 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . initial setup = 2 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . payload setup = 8 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . stage-in = 0 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . payload execution = 8100 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . stage-out = 0 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | . log creation = 0 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,309 | INFO     | ..............................
[2025-12-13 11:52:20] 2025-12-13 16:51:39,401 | INFO     | 
[2025-12-13 11:52:20] 2025-12-13 16:51:39,402 | INFO     | job summary report
[2025-12-13 11:52:20] 2025-12-13 16:51:39,402 | INFO     | --------------------------------------------------
[2025-12-13 11:52:20] 2025-12-13 16:51:39,402 | INFO     | PanDA job id: 6929221928
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | task id: 47886831
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | errors: (none)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | pilot state: finished 
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | transexitcode: 0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,403 | INFO     | exeerrorcode: 0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | exeerrordiag: 
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | exitcode: 0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | exitmsg: OK
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | cpuconsumptiontime: 59984 s
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | nevents: 400
[2025-12-13 11:52:20] 2025-12-13 16:51:39,404 | INFO     | neventsw: 0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | pid: 18617
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | pgrp: 18617
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | corecount: 8
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | event service: False
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | sizes: {0: 2283989, 6: 2284251, 11: 2284279, 8112: 2312011, 8113: 2321065, 8120: 2321203}
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | --------------------------------------------------
[2025-12-13 11:52:20] 2025-12-13 16:51:39,405 | INFO     | 
[2025-12-13 11:52:20] 2025-12-13 16:51:39,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 11:52:20] 2025-12-13 16:51:39,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,431 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 11:52:20] 2025-12-13 16:51:39,434 | INFO     | job 6929221928 has completed (purged errors)
[2025-12-13 11:52:20] 2025-12-13 16:51:39,434 | INFO     | overall cleanup function is called
[2025-12-13 11:52:20] 2025-12-13 16:51:40,442 | INFO     | --- collectZombieJob: --- 10, [18617]
[2025-12-13 11:52:20] 2025-12-13 16:51:40,442 | INFO     | zombie collector waiting for pid 18617
[2025-12-13 11:52:20] 2025-12-13 16:51:40,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 11:52:20] 2025-12-13 16:51:40,442 | INFO     | collected zombie processes
[2025-12-13 11:52:20] 2025-12-13 16:51:40,443 | INFO     | will attempt to kill all subprocesses of pid=18617
[2025-12-13 11:52:20] 2025-12-13 16:51:40,536 | INFO     | process IDs to be killed: [18617] (in reverse order)
[2025-12-13 11:52:20] 2025-12-13 16:51:40,590 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 11:52:20] 2025-12-13 16:51:40,591 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 11:52:20] 2025-12-13 16:51:40,595 | INFO     | did not find any defunct processes belonging to 18617
[2025-12-13 11:52:20] 2025-12-13 16:51:40,598 | INFO     | did not find any defunct processes belonging to 18617
[2025-12-13 11:52:20] 2025-12-13 16:51:40,598 | INFO     | ready for new job
[2025-12-13 11:52:20] 2025-12-13 16:51:40,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 11:52:20] 2025-12-13 16:51:40,600 | INFO     | ***************************************
[2025-12-13 11:52:20] 2025-12-13 16:51:40,601 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 11:52:20] 2025-12-13 16:51:40,601 | INFO     | ***************************************
[2025-12-13 11:52:20] 2025-12-13 16:51:40,601 | INFO     | 
[2025-12-13 11:52:20] 2025-12-13 16:51:40,601 | INFO     | architecture information:
[2025-12-13 11:52:20] 2025-12-13 16:51:40,602 | INFO     | executing command: cat /etc/os-release
[2025-12-13 11:52:20] 2025-12-13 16:51:40,619 | INFO     | cat /etc/os-release:
[2025-12-13 11:52:20] NAME="CentOS Linux"
[2025-12-13 11:52:20] VERSION="7 (Core)"
[2025-12-13 11:52:20] ID="centos"
[2025-12-13 11:52:20] ID_LIKE="rhel fedora"
[2025-12-13 11:52:20] VERSION_ID="7"
[2025-12-13 11:52:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 11:52:20] ANSI_COLOR="0;31"
[2025-12-13 11:52:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 11:52:20] HOME_URL="https://www.centos.org/"
[2025-12-13 11:52:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 11:52:20] 
[2025-12-13 11:52:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 11:52:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 11:52:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 11:52:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 11:52:20] 
[2025-12-13 11:52:20] 2025-12-13 16:51:40,619 | INFO     | ***************************************
[2025-12-13 11:52:20] 2025-12-13 16:51:41,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 11:52:20] 2025-12-13 16:51:41,145 | INFO     | sufficient remaining disk space (18684575744 B)
[2025-12-13 11:52:20] 2025-12-13 16:51:41,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 11:52:20] 2025-12-13 16:51:41,146 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 11:52:20] 2025-12-13 16:51:41,146 | INFO     | update_server=False
[2025-12-13 11:52:20] 2025-12-13 16:51:41,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 11:52:20] 2025-12-13 16:51:41,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:52:20] 2025-12-13 16:51:41,528 | INFO     | all data control threads have been joined
[2025-12-13 11:52:20] 2025-12-13 16:51:41,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:52:20] 2025-12-13 16:51:41,725 | INFO     | aborting loop
[2025-12-13 11:52:20] 2025-12-13 16:51:41,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 11:52:20] 2025-12-13 16:51:42,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 11:52:20] 2025-12-13 16:51:42,151 | INFO     | [job] queue monitor thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:42,152 | INFO     | [job] retrieve thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:42,212 | INFO     | all job control threads have been joined
[2025-12-13 11:52:20] 2025-12-13 16:51:42,307 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:42,433 | INFO     | all payload control threads have been joined
[2025-12-13 11:52:20] 2025-12-13 16:51:42,536 | INFO     | [data] control thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:42,731 | INFO     | [job] job monitor thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:42,782 | INFO     | [payload] validate_post thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,218 | INFO     | [job] control thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,290 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,303 | INFO     | [data] copytool_in thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,304 | INFO     | [job] validate thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,439 | INFO     | [payload] control thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,451 | INFO     | [payload] failed_post thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,500 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:43,993 | INFO     | [data] copytool_out thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:46,083 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:51:51,894 | INFO     | job.realtimelogging is not enabled
[2025-12-13 11:52:20] 2025-12-13 16:51:52,899 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 11:52:20] 2025-12-13 16:52:11,928 | INFO     | PID=12184 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 11:52:20] 2025-12-13 16:52:11,929 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 11:52:20] 2025-12-13 16:52:11,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 11:52:20] 2025-12-13 16:52:11,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 11:52:20] 2025-12-13 16:52:13,673 | INFO     | [monitor] cgroup control has ended
[2025-12-13 11:52:20] 2025-12-13 16:52:15,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140379069413184)>', '<ExcThread(monitor, started 140378095208192)>']
[2025-12-13 11:52:20] 2025-12-13 16:52:15,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 11:52:20] 2025-12-13 16:52:15,951 | INFO     | [monitor] control thread has ended
[2025-12-13 11:52:20] 2025-12-13 16:52:20,256 | INFO     | all workflow threads have been joined
[2025-12-13 11:52:20] 2025-12-13 16:52:20,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 11:52:20] 2025-12-13 16:52:20,257 | INFO     | traces error code: 0
[2025-12-13 11:52:20] 2025-12-13 16:52:20,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 11:52:20] 2025-12-13 16:52:20,372 [wrapper] ==== pilot stdout END ====
[2025-12-13 11:52:20] 2025-12-13 16:52:20,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 11:52:20] 2025-12-13 16:52:20,382 [wrapper] pilotpid: 12184
[2025-12-13 11:52:20] 2025-12-13 16:52:20,387 [wrapper] Pilot exit status: 0
[2025-12-13 11:52:20] 2025-12-13 16:52:20,406 [wrapper] pandaids: 6929221928
[2025-12-13 11:52:20] 2025-12-13 16:52:20,451 [wrapper] cleanup supervisor_pilot 15949 12185
[2025-12-13 11:52:20] 2025-12-13 16:52:20,456 [wrapper] Test setup, not cleaning
[2025-12-13 11:52:20] 2025-12-13 16:52:20,460 [wrapper] apfmon messages muted
[2025-12-13 11:52:20] 2025-12-13 16:52:20,465 [wrapper] ==== wrapper stdout END ====
[2025-12-13 11:52:20] 2025-12-13 16:52:20,470 [wrapper] ==== wrapper stderr END ====
[2025-12-13 11:52:20]  *** Error codes and diagnostics ***
[2025-12-13 11:52:20]     "exeErrorCode": 0,
[2025-12-13 11:52:20]     "exeErrorDiag": "",
[2025-12-13 11:52:20]     "pilotErrorCode": 0,
[2025-12-13 11:52:20]     "pilotErrorDiag": "",
[2025-12-13 11:52:20]  *** Listing of results directory ***
[2025-12-13 11:52:20] total 333080
[2025-12-13 11:52:20] -rwx------ 1 boincer umatlas     36322 Dec 13 03:50 runpilot2-wrapper.sh
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:51 queuedata.json
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas       100 Dec 13 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 11:52:20] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 09:35 run_atlas
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas       105 Dec 13 09:35 job.xml
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas 189621895 Dec 13 09:35 EVNT.47886829._000160.pool.root.1
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:35 start_atlas.sh
[2025-12-13 11:52:20] drwxrwx--x 2 boincer umatlas      4096 Dec 13 09:35 shared
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas    592417 Dec 13 09:35 input.tar.gz
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas         0 Dec 13 09:35 boinc_lockfile
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas      2537 Dec 13 09:35 pandaJob.out
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas        57 Dec 13 09:35 setup.sh.local
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas    991736 Dec 13 09:35 agis_schedconf.cvmfs.json
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas   1516240 Dec 13 09:36 agis_ddmendpoints.agis.ALL.json
[2025-12-13 11:52:20] drwx------ 5 boincer umatlas      4096 Dec 13 09:36 pilot3
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 11:45 init_data.xml
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas 144480585 Dec 13 11:51 HITS.47886831._004003.pool.root.1
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas       529 Dec 13 11:51 boinc_task_state.xml
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas      1048 Dec 13 11:51 memory_monitor_summary.json
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas    388334 Dec 13 11:51 log.47886831._004003.job.log.tgz.1
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas      7845 Dec 13 11:51 heartbeat.json
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 11:51 boinc_mmap_file
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas        27 Dec 13 11:51 wrapper_checkpoint.txt
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas        95 Dec 13 11:52 pilot_heartbeat.json
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas      4818 Dec 13 11:52 pilotlog.txt
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas   1138793 Dec 13 11:52 log.47886831._004003.job.log.1
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas       357 Dec 13 11:52 output.list
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas       620 Dec 13 11:52 runtime_log
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas   1546240 Dec 13 11:52 result.tar.gz
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas      9342 Dec 13 11:52 runtime_log.err
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas       660 Dec 13 11:52 KyPODmWVao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxHOKDmE4tQUm.diag
[2025-12-13 11:52:20] -rw-r--r-- 1 boincer umatlas     21281 Dec 13 11:52 stderr.txt
[2025-12-13 11:52:20] HITS file was successfully produced:
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas 144480585 Dec 13 11:51 shared/HITS.pool.root.1
[2025-12-13 11:52:20]  *** Contents of shared directory: ***
[2025-12-13 11:52:20] total 328384
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas 189621895 Dec 13 09:35 ATLAS.root_0
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:35 start_atlas.sh
[2025-12-13 11:52:20] -rw-r--r-- 2 boincer umatlas    592417 Dec 13 09:35 input.tar.gz
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas 144480585 Dec 13 11:51 HITS.pool.root.1
[2025-12-13 11:52:20] -rw------- 1 boincer umatlas   1546240 Dec 13 11:52 result.tar.gz
11:52:22 (8412): run_atlas exited; CPU time 59941.618734
11:52:22 (8412): called boinc_finish(0)

</stderr_txt>
]]>

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