Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:58:01 (2547009): wrapper (7.7.26015): starting
19:58:01 (2547009): wrapper: running run_atlas (--nthreads 3)
[2025-12-13 19:58:01] Arguments: --nthreads 3
[2025-12-13 19:58:01] Threads: 3
[2025-12-13 19:58:01] Checking for CVMFS
[2025-12-13 19:58:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 19:58:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 19:58:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 19:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 19:58:01] 2.9.2.0 2336495 837 67092 153969 1 57 33116776 36864001 0 130560 0 555830 99.988 31447 16184 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-13 19:58:01] CVMFS is ok
[2025-12-13 19:58:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 19:58:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 19:58:01] Further information can be found at the LHC@home message board.
[2025-12-13 19:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 19:58:01] Checking for apptainer binary...
[2025-12-13 19:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 19:58:01] Running /usr/bin/apptainer --version
[2025-12-13 19:58:01] apptainer version 1.4.1-1.1
[2025-12-13 19:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 19:58:01] atlasA214
[2025-12-13 19:58:01] apptainer works
[2025-12-13 19:58:01] Set ATHENA_PROC_NUMBER=3
[2025-12-13 19:58:01] Set ATHENA_CORE_NUMBER=3
[2025-12-13 19:58:01] Starting ATLAS job with PandaID=6929041368
[2025-12-13 19:58:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:26:20]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:26:20]  protocol_id=None
[2025-12-13 21:26:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 21:26:20]  replicas=None
[2025-12-13 21:26:20]  scope=mc23_13p6TeV
[2025-12-13 21:26:20]  status=None
[2025-12-13 21:26:20]  status_code=0
[2025-12-13 21:26:20]  storage_token=
[2025-12-13 21:26:20]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6929041368/log.47886831._003414.job.log.tgz.1
[2025-12-13 21:26:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/4d/log.47886831._003414.job.log.tgz.1
[2025-12-13 21:26:20]  workdir=None
[2025-12-13 21:26:20] ]
[2025-12-13 21:26:20] 2025-12-13 20:25:41,319 | INFO     | transferring file log.47886831._003414.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6929041368/log.47886831._003414.job.log.tgz.1 to /local/data/boinc/
[2025-12-13 21:26:20] 2025-12-13 20:25:41,319 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6929041368/log.47886831._003414.job.log.tgz.1 /local/data/boinc/slots/0/log.47886831._0034
[2025-12-13 21:26:20] 2025-12-13 20:25:41,331 | INFO     | adding to output.list: log.47886831._003414.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c7/4d/log.47886831._003414.job.log.tg
[2025-12-13 21:26:20] 2025-12-13 20:25:41,331 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 21:26:20] 2025-12-13 20:25:41,332 | INFO     | summary of transferred files:
[2025-12-13 21:26:20] 2025-12-13 20:25:41,332 | INFO     |  -- lfn=log.47886831._003414.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 21:26:20] 2025-12-13 20:25:41,332 | INFO     | stage-out finished correctly
[2025-12-13 21:26:20] 2025-12-13 20:25:41,371 | INFO     | number of running child processes to parent process 2557170: 1
[2025-12-13 21:26:20] 2025-12-13 20:25:41,371 | INFO     | maximum number of monitored processes: 6
[2025-12-13 21:26:20] 2025-12-13 20:25:42,884 | INFO     | time since job start (5255s) is within the limit (174528.0s)
[2025-12-13 21:26:20] 2025-12-13 20:25:43,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | job 6929041368 has state=finished
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | preparing for final server update for job 6929041368 in state='finished'
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | this job has now completed (state=finished)
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | log transfer has been attempted: DONE
[2025-12-13 21:26:20] 2025-12-13 20:25:43,863 | INFO     | job 6929041368 has finished - writing final server update
[2025-12-13 21:26:20] 2025-12-13 20:25:43,864 | INFO     | total number of processed events: 400 (read)
[2025-12-13 21:26:20] 2025-12-13 20:25:43,864 | INFO     | executing command: lscpu
[2025-12-13 21:26:20] 2025-12-13 20:25:43,875 | INFO     | monitor loop #404: job 0:6929041368 is in state 'finished'
[2025-12-13 21:26:20] 2025-12-13 20:25:43,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:26:20] 2025-12-13 20:25:43,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 21:26:20] 2025-12-13 20:25:44,886 | INFO     | time since job start (5257s) is within the limit (174528.0s)
[2025-12-13 21:26:20] 2025-12-13 20:25:46,378 | INFO     | monitor loop #405: job 0:6929041368 is in state 'finished'
[2025-12-13 21:26:20] 2025-12-13 20:25:46,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 21:26:20] 2025-12-13 20:25:46,891 | INFO     | time since job start (5259s) is within the limit (174528.0s)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,339 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 21:26:20] 2025-12-13 20:25:47,340 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3555.5479166666664
[2025-12-13 21:26:20] 2025-12-13 20:25:47,341 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6929041368/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | INFO     | extracted standard info from prmon json
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:26:20] 2025-12-13 20:25:47,342 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | sum of square deviations: 152858680.0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | sum of deviations: -1103060743.0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | mean x: 1765654990.0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | mean y: 2365187.8227848103
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | intersect: 12743707093.634462
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | chi2: 0.04912708634805669
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | current memory leak: -7.22 B/s (using 79 data points, chi2=0.05)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | could have reported an average CPU frequency of 3743 MHz (6 samples)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | ..............................
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . Timing measurements:
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . get job = 0 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . initial setup = 1 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . payload setup = 2 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . stage-in = 0 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . payload execution = 5234 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . stage-out = 0 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | . log creation = 0 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,343 | INFO     | ..............................
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | 
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | job summary report
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | --------------------------------------------------
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | PanDA job id: 6929041368
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | task id: 47886831
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | errors: (none)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | pilot state: finished 
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | transexitcode: 0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | exeerrorcode: 0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | exeerrordiag: 
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | exitcode: 0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | exitmsg: OK
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | cpuconsumptiontime: 15100 s
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | nevents: 400
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | neventsw: 0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | pid: 2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:47,514 | INFO     | pgrp: 2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | corecount: 3
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | event service: False
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | sizes: {0: 2283992, 2: 2284254, 11: 2284282, 5240: 2310923, 5241: 2319927, 5244: 2319983, 5247: 2320305}
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | --------------------------------------------------
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | 
[2025-12-13 21:26:20] 2025-12-13 20:25:47,515 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-13 21:26:20] 2025-12-13 20:25:47,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | job 6929041368 has completed (purged errors)
[2025-12-13 21:26:20] 2025-12-13 20:25:47,531 | INFO     | overall cleanup function is called
[2025-12-13 21:26:20] 2025-12-13 20:25:47,949 | INFO     | PID=2550730 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 21:26:20] 2025-12-13 20:25:48,537 | INFO     | --- collectZombieJob: --- 10, [2557170]
[2025-12-13 21:26:20] 2025-12-13 20:25:48,537 | INFO     | zombie collector waiting for pid 2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:48,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:26:20] 2025-12-13 20:25:48,537 | INFO     | collected zombie processes
[2025-12-13 21:26:20] 2025-12-13 20:25:48,538 | INFO     | will attempt to kill all subprocesses of pid=2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:48,577 | INFO     | process IDs to be killed: [2557170] (in reverse order)
[2025-12-13 21:26:20] 2025-12-13 20:25:48,601 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:26:20] 2025-12-13 20:25:48,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:26:20] 2025-12-13 20:25:48,602 | INFO     | did not find any defunct processes belonging to 2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:48,603 | INFO     | did not find any defunct processes belonging to 2557170
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | ready for new job
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | ***************************************
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | ***************************************
[2025-12-13 21:26:20] 2025-12-13 20:25:48,604 | INFO     | 
[2025-12-13 21:26:20] 2025-12-13 20:25:48,605 | INFO     | architecture information:
[2025-12-13 21:26:20] 2025-12-13 20:25:48,605 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:26:20] 2025-12-13 20:25:48,613 | INFO     | cat /etc/os-release:
[2025-12-13 21:26:20] NAME="CentOS Linux"
[2025-12-13 21:26:20] VERSION="7 (Core)"
[2025-12-13 21:26:20] ID="centos"
[2025-12-13 21:26:20] ID_LIKE="rhel fedora"
[2025-12-13 21:26:20] VERSION_ID="7"
[2025-12-13 21:26:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:26:20] ANSI_COLOR="0;31"
[2025-12-13 21:26:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:26:20] HOME_URL="https://www.centos.org/"
[2025-12-13 21:26:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:26:20] 
[2025-12-13 21:26:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:26:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:26:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:26:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:26:20] 
[2025-12-13 21:26:20] 2025-12-13 20:25:48,614 | INFO     | ***************************************
[2025-12-13 21:26:20] 2025-12-13 20:25:49,117 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | INFO     | sufficient remaining disk space (226881437696 B)
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | INFO     | update_server=False
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:26:20] 2025-12-13 20:25:49,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:26:20] 2025-12-13 20:25:49,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:26:20] 2025-12-13 20:25:49,752 | INFO     | all data control threads have been joined
[2025-12-13 21:26:20] 2025-12-13 20:25:49,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:26:20] 2025-12-13 20:25:49,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:26:20] 2025-12-13 20:25:49,887 | INFO     | aborting loop
[2025-12-13 21:26:20] 2025-12-13 20:25:50,081 | INFO     | all job control threads have been joined
[2025-12-13 21:26:20] 2025-12-13 20:25:50,136 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,136 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,149 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,169 | INFO     | all payload control threads have been joined
[2025-12-13 21:26:20] 2025-12-13 20:25:50,441 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,461 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,753 | INFO     | [data] control thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:50,893 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,015 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,083 | INFO     | [job] control thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,093 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,175 | INFO     | [payload] control thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,379 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,585 | INFO     | [job] validate thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:51,635 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:53,870 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:25:59,427 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:26:20] 2025-12-13 20:26:00,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:26:20] 2025-12-13 20:26:13,878 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:26:20] 2025-12-13 20:26:13,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140576123893568)>', '<ExcThread(monitor, started 140575841945344)>']
[2025-12-13 21:26:20] 2025-12-13 20:26:19,025 | INFO     | all workflow threads have been joined
[2025-12-13 21:26:20] 2025-12-13 20:26:19,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:26:20] 2025-12-13 20:26:19,026 | INFO     | traces error code: 0
[2025-12-13 21:26:20] 2025-12-13 20:26:19,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | INFO     | PID=2550730 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:26:20] 2025-12-13 20:26:20,054 | INFO     | [monitor] control thread has ended
[2025-12-13 21:26:20] 2025-12-13 20:26:20,101 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:26:20] 2025-12-13 20:26:20,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:26:20] 2025-12-13 20:26:20,106 [wrapper] pilotpid: 2550730
[2025-12-13 21:26:20] 2025-12-13 20:26:20,108 [wrapper] Pilot exit status: 0
[2025-12-13 21:26:20] 2025-12-13 20:26:20,115 [wrapper] pandaids: 6929041368
[2025-12-13 21:26:20] 2025-12-13 20:26:20,130 [wrapper] cleanup supervisor_pilot 2568953 2550731
[2025-12-13 21:26:20] 2025-12-13 20:26:20,133 [wrapper] Test setup, not cleaning
[2025-12-13 21:26:20] 2025-12-13 20:26:20,135 [wrapper] apfmon messages muted
[2025-12-13 21:26:20] 2025-12-13 20:26:20,137 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:26:20] 2025-12-13 20:26:20,140 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:26:20]  *** Error codes and diagnostics ***
[2025-12-13 21:26:20]     "exeErrorCode": 0,
[2025-12-13 21:26:20]     "exeErrorDiag": "",
[2025-12-13 21:26:20]     "pilotErrorCode": 0,
[2025-12-13 21:26:20]     "pilotErrorDiag": "",
[2025-12-13 21:26:20]  *** Listing of results directory ***
[2025-12-13 21:26:20] total 337692
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc    579449 Dec 13 07:26 pilot3.tar.gz
[2025-12-13 21:26:20] -rwx------ 1 boinc boinc     36322 Dec 13 07:50 runpilot2-wrapper.sh
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc      5112 Dec 13 07:51 queuedata.json
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc       100 Dec 13 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:26:20] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 19:58 run_atlas
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc       105 Dec 13 19:58 job.xml
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc 189630656 Dec 13 19:58 EVNT.47886829._000139.pool.root.1
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc    592411 Dec 13 19:58 input.tar.gz
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc     15847 Dec 13 19:58 start_atlas.sh
[2025-12-13 21:26:20] drwxrwx--x 2 boinc boinc      4096 Dec 13 19:58 shared
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc         0 Dec 13 19:58 boinc_setup_complete
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc      6443 Dec 13 19:58 init_data.xml
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc         0 Dec 13 19:58 boinc_lockfile
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc      2537 Dec 13 19:58 pandaJob.out
[2025-12-13 21:26:20] -rw------- 1 boinc boinc    991736 Dec 13 19:58 agis_schedconf.cvmfs.json
[2025-12-13 21:26:20] -rw------- 1 boinc boinc   1516240 Dec 13 19:58 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:26:20] drwx------ 5 boinc boinc      4096 Dec 13 19:58 pilot3
[2025-12-13 21:26:20] -rw------- 1 boinc boinc 150206568 Dec 13 21:25 HITS.47886831._003414.pool.root.1
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc       529 Dec 13 21:25 boinc_task_state.xml
[2025-12-13 21:26:20] -rw------- 1 boinc boinc        95 Dec 13 21:25 pilot_heartbeat.json
[2025-12-13 21:26:20] -rw------- 1 boinc boinc      1019 Dec 13 21:25 memory_monitor_summary.json
[2025-12-13 21:26:20] -rw------- 1 boinc boinc    253859 Dec 13 21:25 log.47886831._003414.job.log.tgz.1
[2025-12-13 21:26:20] -rw------- 1 boinc boinc      7757 Dec 13 21:25 heartbeat.json
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc      8192 Dec 13 21:26 boinc_mmap_file
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc        27 Dec 13 21:26 wrapper_checkpoint.txt
[2025-12-13 21:26:20] -rw------- 1 boinc boinc       747 Dec 13 21:26 pilotlog.txt
[2025-12-13 21:26:20] -rw------- 1 boinc boinc    768980 Dec 13 21:26 log.47886831._003414.job.log.1
[2025-12-13 21:26:20] -rw------- 1 boinc boinc       357 Dec 13 21:26 output.list
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc       620 Dec 13 21:26 runtime_log
[2025-12-13 21:26:20] -rw------- 1 boinc boinc   1044480 Dec 13 21:26 result.tar.gz
[2025-12-13 21:26:20] -rw------- 1 boinc boinc       661 Dec 13 21:26 wxWNDm7dYo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU8RKDmrKrBsn.diag
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc      8912 Dec 13 21:26 runtime_log.err
[2025-12-13 21:26:20] -rw-r--r-- 1 boinc boinc     21902 Dec 13 21:26 stderr.txt
[2025-12-13 21:26:20] HITS file was successfully produced:
[2025-12-13 21:26:20] -rw------- 1 boinc boinc 150206568 Dec 13 21:25 shared/HITS.pool.root.1
[2025-12-13 21:26:20]  *** Contents of shared directory: ***
[2025-12-13 21:26:20] total 333500
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc 189630656 Dec 13 19:58 ATLAS.root_0
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc    592411 Dec 13 19:58 input.tar.gz
[2025-12-13 21:26:20] -rw-r--r-- 2 boinc boinc     15847 Dec 13 19:58 start_atlas.sh
[2025-12-13 21:26:20] -rw------- 1 boinc boinc 150206568 Dec 13 21:25 HITS.pool.root.1
[2025-12-13 21:26:20] -rw------- 1 boinc boinc   1044480 Dec 13 21:26 result.tar.gz
21:26:21 (2547009): run_atlas exited; CPU time 15118.320056
21:26:21 (2547009): called boinc_finish(0)

</stderr_txt>
]]>

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