Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:16:00 (23060): wrapper (7.7.26015): starting
09:16:00 (23060): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 09:16:00] Arguments: --nthreads 12
[2025-12-13 09:16:00] Threads: 12
[2025-12-13 09:16:00] Checking for CVMFS
[2025-12-13 09:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:16:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:16:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:16:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:16:01] 2.11.2.0 2925 312270 95216 153963 3 9 15420340 20275200 1 130560 1 137916381 99.966 18159740 15162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 09:16:01] CVMFS is ok
[2025-12-13 09:16:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:16:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:16:01] Further information can be found at the LHC@home message board.
[2025-12-13 09:16:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:16:01] Checking for apptainer binary...
[2025-12-13 09:16:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:16:01] Running /usr/bin/apptainer --version
[2025-12-13 09:16:01] apptainer version 1.3.2-1.el7
[2025-12-13 09:16:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:16:02] c-205-9.aglt2.org
[2025-12-13 09:16:02] apptainer works
[2025-12-13 09:16:02] Set ATHENA_PROC_NUMBER=12
[2025-12-13 09:16:02] Set ATHENA_CORE_NUMBER=12
[2025-12-13 09:16:02] Starting ATLAS job with PandaID=6929275713
[2025-12-13 09:16:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 10:59:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 10:59:32] 2025-12-13 15:58:30,460 | INFO     | sum of square deviations: 310052325.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,461 | INFO     | sum of deviations: 3683172832.4999957
[2025-12-13 10:59:32] 2025-12-13 15:58:30,461 | INFO     | mean x: 1765638425.5
[2025-12-13 10:59:32] 2025-12-13 15:58:30,461 | INFO     | mean y: 2731693.01
[2025-12-13 10:59:32] 2025-12-13 15:58:30,461 | INFO     | intersect: -20971636039.338623
[2025-12-13 10:59:32] 2025-12-13 15:58:30,461 | INFO     | chi2: 1.6822997318797122
[2025-12-13 10:59:32] 2025-12-13 15:58:30,462 | INFO     | sum of square deviations: 265828240.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,462 | INFO     | sum of deviations: 4316721912.999998
[2025-12-13 10:59:32] 2025-12-13 15:58:30,462 | INFO     | mean x: 1765638273.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,462 | INFO     | mean y: 2733880.547368421
[2025-12-13 10:59:32] 2025-12-13 15:58:30,462 | INFO     | intersect: -28669048408.236443
[2025-12-13 10:59:32] 2025-12-13 15:58:30,463 | INFO     | chi2: 1.685543450161104
[2025-12-13 10:59:32] 2025-12-13 15:58:30,463 | INFO     | current chi2=1.685543450161104 (change=-0.1928145276328046 %)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,463 | INFO     | right removable region: 94
[2025-12-13 10:59:32] 2025-12-13 15:58:30,463 | INFO     | sum of square deviations: 265828240.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,463 | INFO     | sum of deviations: -13165208612.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,464 | INFO     | mean x: 1765638578.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,464 | INFO     | mean y: 2788625.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,464 | INFO     | intersect: 87446471104.9541
[2025-12-13 10:59:32] 2025-12-13 15:58:30,464 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,464 | INFO     | chi2: 0.17483893339859047
[2025-12-13 10:59:32] 2025-12-13 15:58:30,465 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,465 | INFO     | current chi2=0.17483893339859047 (change=89.6071472826525 %)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,465 | INFO     | sum of square deviations: 226022842.5
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | sum of deviations: -16061183002.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | mean x: 1765638730.5
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | mean y: 2799417.222222222
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | intersect: 125469086153.1722
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | chi2: 0.06618223579738088
[2025-12-13 10:59:32] 2025-12-13 15:58:30,466 | INFO     | current chi2=0.06618223579738088 (change=62.14674013910769 %)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,467 | INFO     | sum of square deviations: 190403570.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,467 | INFO     | sum of deviations: -14388653648.000002
[2025-12-13 10:59:32] 2025-12-13 15:58:30,467 | INFO     | mean x: 1765638883.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,467 | INFO     | mean y: 2792215.0235294118
[2025-12-13 10:59:32] 2025-12-13 15:58:30,468 | INFO     | intersect: 133430786001.7398
[2025-12-13 10:59:32] 2025-12-13 15:58:30,468 | INFO     | chi2: 0.06328073641824279
[2025-12-13 10:59:32] 2025-12-13 15:58:30,468 | INFO     | current chi2=0.06328073641824279 (change=4.384106013010985 %)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,468 | INFO     | left removable region: 30
[2025-12-13 10:59:32] 2025-12-13 15:58:30,468 | INFO     | sum of square deviations: 81266640.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,469 | INFO     | sum of deviations: -6945142678.0
[2025-12-13 10:59:32] 2025-12-13 15:58:30,469 | INFO     | mean x: 1765639157.5
[2025-12-13 10:59:32] 2025-12-13 15:58:30,469 | INFO     | mean y: 2761818.8125
[2025-12-13 10:59:32] 2025-12-13 15:58:30,469 | INFO     | intersect: 150896361784.32373
[2025-12-13 10:59:32] 2025-12-13 15:58:30,469 | INFO     | chi2: 0.05501288721129157
[2025-12-13 10:59:32] 2025-12-13 15:58:30,470 | INFO     | current memory leak: -85.46 B/s (using 64 data points, chi2=0.06)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,470 | INFO     | could have reported an average CPU frequency of 2155 MHz (7 samples)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,470 | INFO     | ..............................
[2025-12-13 10:59:32] 2025-12-13 15:58:30,470 | INFO     | . Timing measurements:
[2025-12-13 10:59:32] 2025-12-13 15:58:30,470 | INFO     | . get job = 0 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . initial setup = 2 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . payload setup = 7 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . stage-in = 0 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . payload execution = 6097 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . stage-out = 0 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | . log creation = 0 s
[2025-12-13 10:59:32] 2025-12-13 15:58:30,471 | INFO     | ..............................
[2025-12-13 10:59:32] 2025-12-13 15:58:30,472 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929275713: 4425851 B (within 2768240640 B limit)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,488 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929275713/HITS.47898836._000861.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,493 | INFO     | total size of present files: 0 B (workdir size: 4425851 B)
[2025-12-13 10:59:32] 2025-12-13 15:58:30,498 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929275713/HITS.47898836._000861.pool.root.1 since it does not exist
[2025-12-13 10:59:32] 2025-12-13 15:58:30,644 | INFO     | number of running child processes to parent process 744: 1
[2025-12-13 10:59:32] 2025-12-13 15:58:30,644 | INFO     | maximum number of monitored processes: 6
[2025-12-13 10:59:32] 2025-12-13 15:58:30,644 | INFO     | aborting job monitoring since job object (job id=6929275713) has expired
[2025-12-13 10:59:32] 2025-12-13 15:58:31,023 | INFO     | 
[2025-12-13 10:59:32] 2025-12-13 15:58:31,024 | INFO     | job summary report
[2025-12-13 10:59:32] 2025-12-13 15:58:31,024 | INFO     | --------------------------------------------------
[2025-12-13 10:59:32] 2025-12-13 15:58:31,024 | INFO     | PanDA job id: 6929275713
[2025-12-13 10:59:32] 2025-12-13 15:58:31,024 | INFO     | task id: 47898836
[2025-12-13 10:59:32] 2025-12-13 15:58:31,024 | INFO     | errors: (none)
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | pilot state: finished 
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | transexitcode: 0
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | exeerrorcode: 0
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | exeerrordiag: 
[2025-12-13 10:59:32] 2025-12-13 15:58:31,025 | INFO     | exitcode: 0
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | exitmsg: OK
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | cpuconsumptiontime: 65126 s
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | nevents: 400
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | neventsw: 0
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | pid: 744
[2025-12-13 10:59:32] 2025-12-13 15:58:31,026 | INFO     | pgrp: 744
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | corecount: 12
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | event service: False
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | sizes: {0: 2284002, 5: 2284264, 11: 2284320, 6108: 2311068, 6109: 2320066, 6110: 2320122, 6117: 2320472}
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | --------------------------------------------------
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | 
[2025-12-13 10:59:32] 2025-12-13 15:58:31,027 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 10:59:32] 2025-12-13 15:58:31,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,055 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 10:59:32] 2025-12-13 15:58:31,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 10:59:32] 2025-12-13 15:58:31,056 | INFO     | job 6929275713 has completed (purged errors)
[2025-12-13 10:59:32] 2025-12-13 15:58:31,056 | INFO     | overall cleanup function is called
[2025-12-13 10:59:32] 2025-12-13 15:58:31,358 | INFO     | PID=26836 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 10:59:32] 2025-12-13 15:58:32,064 | INFO     | --- collectZombieJob: --- 10, [744]
[2025-12-13 10:59:32] 2025-12-13 15:58:32,064 | INFO     | zombie collector waiting for pid 744
[2025-12-13 10:59:32] 2025-12-13 15:58:32,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 10:59:32] 2025-12-13 15:58:32,065 | INFO     | collected zombie processes
[2025-12-13 10:59:32] 2025-12-13 15:58:32,065 | INFO     | will attempt to kill all subprocesses of pid=744
[2025-12-13 10:59:32] 2025-12-13 15:58:32,151 | INFO     | process IDs to be killed: [744] (in reverse order)
[2025-12-13 10:59:32] 2025-12-13 15:58:32,202 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 10:59:32] 2025-12-13 15:58:32,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 10:59:32] 2025-12-13 15:58:32,206 | INFO     | did not find any defunct processes belonging to 744
[2025-12-13 10:59:32] 2025-12-13 15:58:32,209 | INFO     | did not find any defunct processes belonging to 744
[2025-12-13 10:59:32] 2025-12-13 15:58:32,209 | INFO     | ready for new job
[2025-12-13 10:59:32] 2025-12-13 15:58:32,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 10:59:32] 2025-12-13 15:58:32,210 | INFO     | ***************************************
[2025-12-13 10:59:32] 2025-12-13 15:58:32,210 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 10:59:32] 2025-12-13 15:58:32,211 | INFO     | ***************************************
[2025-12-13 10:59:32] 2025-12-13 15:58:32,211 | INFO     | 
[2025-12-13 10:59:32] 2025-12-13 15:58:32,211 | INFO     | architecture information:
[2025-12-13 10:59:32] 2025-12-13 15:58:32,212 | INFO     | executing command: cat /etc/os-release
[2025-12-13 10:59:32] 2025-12-13 15:58:32,225 | INFO     | cat /etc/os-release:
[2025-12-13 10:59:32] NAME="CentOS Linux"
[2025-12-13 10:59:32] VERSION="7 (Core)"
[2025-12-13 10:59:32] ID="centos"
[2025-12-13 10:59:32] ID_LIKE="rhel fedora"
[2025-12-13 10:59:32] VERSION_ID="7"
[2025-12-13 10:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 10:59:32] ANSI_COLOR="0;31"
[2025-12-13 10:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 10:59:32] HOME_URL="https://www.centos.org/"
[2025-12-13 10:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 10:59:32] 
[2025-12-13 10:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 10:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 10:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 10:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 10:59:32] 
[2025-12-13 10:59:32] 2025-12-13 15:58:32,226 | INFO     | ***************************************
[2025-12-13 10:59:32] 2025-12-13 15:58:32,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 10:59:32] 2025-12-13 15:58:32,745 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-12-13 10:59:32] 2025-12-13 15:58:32,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 10:59:32] 2025-12-13 15:58:32,746 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 10:59:32] 2025-12-13 15:58:32,746 | INFO     | update_server=False
[2025-12-13 10:59:32] 2025-12-13 15:58:32,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 10:59:32] 2025-12-13 15:58:33,055 | INFO     | all job control threads have been joined
[2025-12-13 10:59:32] 2025-12-13 15:58:33,104 | INFO     | all data control threads have been joined
[2025-12-13 10:59:32] 2025-12-13 15:58:33,147 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 10:59:32] 2025-12-13 15:58:33,148 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 10:59:32] 2025-12-13 15:58:33,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:59:32] 2025-12-13 15:58:33,148 | INFO     | will abort loop
[2025-12-13 10:59:32] 2025-12-13 15:58:33,367 | INFO     | all payload control threads have been joined
[2025-12-13 10:59:32] 2025-12-13 15:58:33,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 10:59:32] 2025-12-13 15:58:33,752 | INFO     | [job] retrieve thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:33,885 | INFO     | [payload] failed_post thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:33,906 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,060 | INFO     | [job] control thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,062 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,109 | INFO     | [data] control thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,153 | INFO     | [job] job monitor thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,372 | INFO     | [payload] control thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,465 | INFO     | [payload] validate_post thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,516 | INFO     | [data] copytool_in thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,615 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:34,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 10:59:32] 2025-12-13 15:58:35,152 | INFO     | [job] validate thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:35,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:59:32] 2025-12-13 15:58:35,617 | INFO     | [data] copytool_out thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:36,578 | INFO     | [job] queue monitor thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:58:38,705 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 10:59:32] 2025-12-13 15:59:03,554 | INFO     | PID=26836 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 10:59:32] 2025-12-13 15:59:03,555 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 10:59:32] 2025-12-13 15:59:03,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 10:59:32] 2025-12-13 15:59:03,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 10:59:32] 2025-12-13 15:59:26,498 | INFO     | [monitor] cgroup control has ended
[2025-12-13 10:59:32] 2025-12-13 15:59:27,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212388046656)>', '<ExcThread(monitor, started 140211791050496)>']
[2025-12-13 10:59:32] 2025-12-13 15:59:27,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 10:59:32] 2025-12-13 15:59:27,675 | INFO     | [monitor] control thread has ended
[2025-12-13 10:59:32] 2025-12-13 15:59:32,482 | INFO     | all workflow threads have been joined
[2025-12-13 10:59:32] 2025-12-13 15:59:32,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 10:59:32] 2025-12-13 15:59:32,482 | INFO     | traces error code: 0
[2025-12-13 10:59:32] 2025-12-13 15:59:32,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 10:59:32] 2025-12-13 15:59:32,563 [wrapper] ==== pilot stdout END ====
[2025-12-13 10:59:32] 2025-12-13 15:59:32,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 10:59:32] 2025-12-13 15:59:32,570 [wrapper] pilotpid: 26836
[2025-12-13 10:59:32] 2025-12-13 15:59:32,574 [wrapper] Pilot exit status: 0
[2025-12-13 10:59:32] 2025-12-13 15:59:32,591 [wrapper] pandaids: 6929275713
[2025-12-13 10:59:32] 2025-12-13 15:59:32,636 [wrapper] cleanup supervisor_pilot   323 26837
[2025-12-13 10:59:32] 2025-12-13 15:59:32,640 [wrapper] Test setup, not cleaning
[2025-12-13 10:59:32] 2025-12-13 15:59:32,644 [wrapper] apfmon messages muted
[2025-12-13 10:59:32] 2025-12-13 15:59:32,648 [wrapper] ==== wrapper stdout END ====
[2025-12-13 10:59:32] 2025-12-13 15:59:32,651 [wrapper] ==== wrapper stderr END ====
[2025-12-13 10:59:32]  *** Error codes and diagnostics ***
[2025-12-13 10:59:32]     "exeErrorCode": 0,
[2025-12-13 10:59:32]     "exeErrorDiag": "",
[2025-12-13 10:59:32]     "pilotErrorCode": 0,
[2025-12-13 10:59:32]     "pilotErrorDiag": "",
[2025-12-13 10:59:32]  *** Listing of results directory ***
[2025-12-13 10:59:32] total 410460
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 10:59:32] -rwx------ 1 boincer umatlas     36322 Dec 13 05:06 runpilot2-wrapper.sh
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:11 queuedata.json
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas       100 Dec 13 09:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 10:59:32] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 09:15 run_atlas
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas       105 Dec 13 09:15 job.xml
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas 212580670 Dec 13 09:16 EVNT.47898833._000035.pool.root.1
[2025-12-13 10:59:32] drwxrwx--x 2 boincer umatlas      4096 Dec 13 09:16 shared
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 09:16 input.tar.gz
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:16 start_atlas.sh
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas         0 Dec 13 09:16 boinc_lockfile
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas      2547 Dec 13 09:16 pandaJob.out
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas        57 Dec 13 09:16 setup.sh.local
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas    991736 Dec 13 09:16 agis_schedconf.cvmfs.json
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas   1516240 Dec 13 09:16 agis_ddmendpoints.agis.ALL.json
[2025-12-13 10:59:32] drwx------ 5 boincer umatlas      4096 Dec 13 09:16 pilot3
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 10:55 init_data.xml
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas 201254377 Dec 13 10:57 HITS.47898836._000861.pool.root.1
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas       529 Dec 13 10:58 boinc_task_state.xml
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas      1046 Dec 13 10:58 memory_monitor_summary.json
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas    404185 Dec 13 10:58 log.47898836._000861.job.log.tgz.1
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas      7843 Dec 13 10:58 heartbeat.json
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas        95 Dec 13 10:59 pilot_heartbeat.json
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas        27 Dec 13 10:59 wrapper_checkpoint.txt
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 10:59 boinc_mmap_file
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas      4932 Dec 13 10:59 pilotlog.txt
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas    872429 Dec 13 10:59 log.47898836._000861.job.log.1
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas       357 Dec 13 10:59 output.list
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas       620 Dec 13 10:59 runtime_log
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas   1300480 Dec 13 10:59 result.tar.gz
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 10:59 runtime_log.err
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas       658 Dec 13 10:59 82LKDmEhbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmf7SKDmKrfrWn.diag
[2025-12-13 10:59:32] -rw-r--r-- 1 boincer umatlas     21449 Dec 13 10:59 stderr.txt
[2025-12-13 10:59:32] HITS file was successfully produced:
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas 201254377 Dec 13 10:57 shared/HITS.pool.root.1
[2025-12-13 10:59:32]  *** Contents of shared directory: ***
[2025-12-13 10:59:32] total 406012
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas 212580670 Dec 13 09:16 ATLAS.root_0
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 09:16 input.tar.gz
[2025-12-13 10:59:32] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 09:16 start_atlas.sh
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas 201254377 Dec 13 10:57 HITS.pool.root.1
[2025-12-13 10:59:32] -rw------- 1 boincer umatlas   1300480 Dec 13 10:59 result.tar.gz
10:59:34 (23060): run_atlas exited; CPU time 65111.853817
10:59:34 (23060): called boinc_finish(0)

</stderr_txt>
]]>

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