Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:12:06 (2065120): wrapper (7.7.26015): starting
09:12:06 (2065120): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 09:12:06] Arguments: --nthreads 9
[2025-12-13 09:12:06] Threads: 9
[2025-12-13 09:12:06] Checking for CVMFS
[2025-12-13 09:12:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:12:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:12:07] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:12:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:12:08] 2.13.3.0 11601 54633 348368 153962 3 773 28308223 32935936 18558 16776704 0 197563753 99.446 284260779 38839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 09:12:08] CVMFS is ok
[2025-12-13 09:12:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:12:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:12:08] Further information can be found at the LHC@home message board.
[2025-12-13 09:12:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:12:08] Checking for apptainer binary...
[2025-12-13 09:12:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:12:08] Running /usr/bin/apptainer --version
[2025-12-13 09:12:08] apptainer version 1.4.5-2.el9
[2025-12-13 09:12:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:12:08] c6-6-39-4.aglt2.org
[2025-12-13 09:12:08] apptainer works
[2025-12-13 09:12:08] Set ATHENA_PROC_NUMBER=9
[2025-12-13 09:12:08] Set ATHENA_CORE_NUMBER=9
[2025-12-13 09:12:09] Starting ATLAS job with PandaID=6929288962
[2025-12-13 09:12:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:32:17]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:32:17] 2025-12-13 23:07:57,899 | INFO     | monitor loop #1809: job 0:6929288962 is in state 'finished'
[2025-12-13 18:32:17] 2025-12-13 23:07:57,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 18:32:17] 2025-12-13 23:07:59,183 | INFO     | PID=2072048 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-13 18:32:17] 2025-12-13 23:07:59,184 | INFO     | .. there are 24 such processes running
[2025-12-13 18:32:17] 2025-12-13 23:08:00,187 | INFO     | time since job start (32108s) is within the limit (174528.0s)
[2025-12-13 18:32:17] 2025-12-13 23:08:00,433 | INFO     | monitor loop #1810: job 0:6929288962 is in state 'finished'
[2025-12-13 18:32:17] 2025-12-13 23:08:00,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 18:32:17] 2025-12-13 23:08:00,471 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 18:32:17] 2025-12-13 23:08:00,487 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2816.5581428571427
[2025-12-13 18:32:17] 2025-12-13 23:08:00,525 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929288962/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:32:17] 2025-12-13 23:08:00,526 | INFO     | extracted standard info from prmon json
[2025-12-13 18:32:17] 2025-12-13 23:08:00,526 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:32:17] 2025-12-13 23:08:00,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:32:17] 2025-12-13 23:08:00,527 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:32:17] 2025-12-13 23:08:00,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:32:17] 2025-12-13 23:08:00,534 | INFO     | fitting pss+swap vs Time
[2025-12-13 18:32:17] 2025-12-13 23:08:00,535 | INFO     | sum of square deviations: 44870159745.169426
[2025-12-13 18:32:17] 2025-12-13 23:08:00,540 | INFO     | sum of deviations: 34804470805.95993
[2025-12-13 18:32:17] 2025-12-13 23:08:00,540 | INFO     | mean x: 1765651259.1790476
[2025-12-13 18:32:17] 2025-12-13 23:08:00,541 | INFO     | mean y: 2554064.16
[2025-12-13 18:32:17] 2025-12-13 23:08:00,541 | INFO     | intersect: -1367009985.8146455
[2025-12-13 18:32:17] 2025-12-13 23:08:00,541 | INFO     | chi2: 2.8665960024339805
[2025-12-13 18:32:17] 2025-12-13 23:08:00,542 | INFO     | sum of square deviations: 43600359955.007774
[2025-12-13 18:32:18] 2025-12-13 23:08:00,547 | INFO     | sum of deviations: 68344239591.10001
[2025-12-13 18:32:18] 2025-12-13 23:08:00,547 | INFO     | mean x: 1765651106.6807692
[2025-12-13 18:32:18] 2025-12-13 23:08:00,547 | INFO     | mean y: 2558060.85
[2025-12-13 18:32:18] 2025-12-13 23:08:00,548 | INFO     | intersect: -2765127398.485788
[2025-12-13 18:32:18] 2025-12-13 23:08:00,548 | INFO     | chi2: 2.178607124160491
[2025-12-13 18:32:18] 2025-12-13 23:08:00,548 | INFO     | current chi2=2.178607124160491 (change=24.000203645345525 %)
[2025-12-13 18:32:18] 2025-12-13 23:08:00,548 | INFO     | right removable region: 519
[2025-12-13 18:32:18] 2025-12-13 23:08:00,549 | INFO     | sum of square deviations: 43600302615.00775
[2025-12-13 18:32:18] 2025-12-13 23:08:00,554 | INFO     | sum of deviations: -79636185212.52307
[2025-12-13 18:32:18] 2025-12-13 23:08:00,554 | INFO     | mean x: 1765651411.6807692
[2025-12-13 18:32:18] 2025-12-13 23:08:00,554 | INFO     | mean y: 2567767.207692308
[2025-12-13 18:32:18] 2025-12-13 23:08:00,555 | INFO     | intersect: 3227539485.4765234
[2025-12-13 18:32:18] 2025-12-13 23:08:00,555 | INFO     | chi2: 0.7789603874258251
[2025-12-13 18:32:18] 2025-12-13 23:08:00,555 | INFO     | current chi2=0.7789603874258251 (change=72.82629338893857 %)
[2025-12-13 18:32:18] 2025-12-13 23:08:00,556 | INFO     | sum of square deviations: 42354695057.56498
[2025-12-13 18:32:18] 2025-12-13 23:08:00,561 | INFO     | sum of deviations: -81249525767.43886
[2025-12-13 18:32:18] 2025-12-13 23:08:00,562 | INFO     | mean x: 1765651564.1786408
[2025-12-13 18:32:18] 2025-12-13 23:08:00,562 | INFO     | mean y: 2567959.287378641
[2025-12-13 18:32:18] 2025-12-13 23:08:00,562 | INFO     | intersect: 3389638792.0504184
[2025-12-13 18:32:18] 2025-12-13 23:08:00,562 | INFO     | chi2: 0.7662333088314982
[2025-12-13 18:32:18] 2025-12-13 23:08:00,563 | INFO     | current chi2=0.7662333088314982 (change=1.6338544038657907 %)
[2025-12-13 18:32:18] 2025-12-13 23:08:00,563 | INFO     | left removable region: 20
[2025-12-13 18:32:18] 2025-12-13 23:08:00,563 | INFO     | sum of square deviations: 38528473716.404755
[2025-12-13 18:32:18] 2025-12-13 23:08:00,568 | INFO     | sum of deviations: -33128549936.809578
[2025-12-13 18:32:18] 2025-12-13 23:08:00,568 | INFO     | mean x: 1765651686.1823647
[2025-12-13 18:32:18] 2025-12-13 23:08:00,568 | INFO     | mean y: 2570357.635270541
[2025-12-13 18:32:18] 2025-12-13 23:08:00,568 | INFO     | intersect: 1520758710.6765952
[2025-12-13 18:32:18] 2025-12-13 23:08:00,569 | INFO     | chi2: 0.05884298738722469
[2025-12-13 18:32:18] 2025-12-13 23:08:00,569 | INFO     | current memory leak: -0.86 B/s (using 499 data points, chi2=0.06)
[2025-12-13 18:32:18] 2025-12-13 23:08:00,570 | INFO     | could have reported an average CPU frequency of 2888 MHz (21 samples)
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | ..............................
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . Timing measurements:
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . get job = 0 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . initial setup = 4 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . payload setup = 24 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . stage-in = 0 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . payload execution = 32002 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . stage-out = 5 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | . log creation = 0 s
[2025-12-13 18:32:18] 2025-12-13 23:08:00,571 | INFO     | ..............................
[2025-12-13 18:32:18] 2025-12-13 23:08:01,058 | INFO     | 
[2025-12-13 18:32:18] 2025-12-13 23:08:01,058 | INFO     | job summary report
[2025-12-13 18:32:18] 2025-12-13 23:08:01,058 | INFO     | --------------------------------------------------
[2025-12-13 18:32:18] 2025-12-13 23:08:01,058 | INFO     | PanDA job id: 6929288962
[2025-12-13 18:32:18] 2025-12-13 23:08:01,058 | INFO     | task id: 47898782
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | errors: (none)
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | pilot state: finished 
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | transexitcode: 0
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | exeerrorcode: 0
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | exeerrordiag: 
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | exitcode: 0
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | exitmsg: OK
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | cpuconsumptiontime: 57735 s
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | nevents: 400
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | neventsw: 0
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | pid: 2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | pgrp: 2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:01,059 | INFO     | corecount: 9
[2025-12-13 18:32:18] 2025-12-13 23:08:01,060 | INFO     | event service: False
[2025-12-13 18:32:18] 2025-12-13 23:08:01,060 | INFO     | sizes: {0: 2283153, 1: 2283838, 2: 2284037, 13: 2284037, 24: 2284093, 29: 2284383, 35: 2284539, 32031: 2322911, 32037: 2331909, 32039: 2331965, 32056: 2332159}
[2025-12-13 18:32:18] 2025-12-13 23:08:01,060 | INFO     | --------------------------------------------------
[2025-12-13 18:32:18] 2025-12-13 23:08:01,060 | INFO     | 
[2025-12-13 18:32:18] 2025-12-13 23:08:01,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,122 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:32:18] 2025-12-13 23:08:01,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:32:18] 2025-12-13 23:08:01,124 | INFO     | job 6929288962 has completed (purged errors)
[2025-12-13 18:32:18] 2025-12-13 23:08:01,124 | INFO     | overall cleanup function is called
[2025-12-13 18:32:18] 2025-12-13 23:08:02,137 | INFO     | --- collectZombieJob: --- 10, [2093192]
[2025-12-13 18:32:18] 2025-12-13 23:08:02,137 | INFO     | zombie collector waiting for pid 2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:02,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:32:18] 2025-12-13 23:08:02,138 | INFO     | collected zombie processes
[2025-12-13 18:32:18] 2025-12-13 23:08:02,138 | INFO     | will attempt to kill all subprocesses of pid=2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:05,702 | INFO     | process IDs to be killed: [2093192] (in reverse order)
[2025-12-13 18:32:18] 2025-12-13 23:08:06,833 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:32:18] 2025-12-13 23:08:06,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:32:18] 2025-12-13 23:08:06,867 | INFO     | did not find any defunct processes belonging to 2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:07,030 | INFO     | did not find any defunct processes belonging to 2093192
[2025-12-13 18:32:18] 2025-12-13 23:08:07,031 | INFO     | ready for new job
[2025-12-13 18:32:18] 2025-12-13 23:08:07,031 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:32:18] 2025-12-13 23:08:07,057 | INFO     | ***************************************
[2025-12-13 18:32:18] 2025-12-13 23:08:07,058 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:32:18] 2025-12-13 23:08:07,058 | INFO     | ***************************************
[2025-12-13 18:32:18] 2025-12-13 23:08:07,058 | INFO     | 
[2025-12-13 18:32:18] 2025-12-13 23:08:07,065 | INFO     | architecture information:
[2025-12-13 18:32:18] 2025-12-13 23:08:07,065 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:32:18] 2025-12-13 23:08:07,167 | INFO     | cat /etc/os-release:
[2025-12-13 18:32:18] NAME="CentOS Linux"
[2025-12-13 18:32:18] VERSION="7 (Core)"
[2025-12-13 18:32:18] ID="centos"
[2025-12-13 18:32:18] ID_LIKE="rhel fedora"
[2025-12-13 18:32:18] VERSION_ID="7"
[2025-12-13 18:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:32:18] ANSI_COLOR="0;31"
[2025-12-13 18:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:32:18] HOME_URL="https://www.centos.org/"
[2025-12-13 18:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:32:18] 
[2025-12-13 18:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:32:18] 
[2025-12-13 18:32:18] 2025-12-13 23:08:07,168 | INFO     | ***************************************
[2025-12-13 18:32:18] 2025-12-13 23:08:07,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 18:32:18] 2025-12-13 23:08:07,838 | INFO     | sufficient remaining disk space (75157733376 B)
[2025-12-13 18:32:18] 2025-12-13 23:08:07,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:32:18] 2025-12-13 23:08:07,838 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:32:18] 2025-12-13 23:08:07,838 | INFO     | update_server=False
[2025-12-13 18:32:18] 2025-12-13 23:08:07,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:32:18] 2025-12-13 23:08:07,844 | INFO     | all data control threads have been joined
[2025-12-13 18:32:18] 2025-12-13 23:08:08,114 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 18:32:18] 2025-12-13 23:08:08,115 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 18:32:18] 2025-12-13 23:08:08,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:32:18] 2025-12-13 23:08:08,115 | INFO     | will abort loop
[2025-12-13 18:32:18] 2025-12-13 23:08:08,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:32:18] 2025-12-13 23:08:08,553 | INFO     | all job control threads have been joined
[2025-12-13 18:32:18] 2025-12-13 23:08:08,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:32:18] 2025-12-13 23:08:08,844 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:08,869 | INFO     | [data] control thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:08,873 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,122 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,317 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,405 | INFO     | all payload control threads have been joined
[2025-12-13 18:32:18] 2025-12-13 23:08:09,562 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,572 | INFO     | [job] control thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,863 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,938 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:09,939 | INFO     | [job] validate thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:10,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:10,228 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:10,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:32:18] 2025-12-13 23:08:10,427 | INFO     | [payload] control thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:10,484 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:11,254 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:12,842 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:32:18] 2025-12-13 23:08:38,882 | INFO     | PID=2072048 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 18:32:18] 2025-12-13 23:08:38,882 | INFO     | .. there are 24 such processes running
[2025-12-13 18:32:18] 2025-12-13 23:08:38,883 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:32:18] 2025-12-13 23:08:38,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:32:18] 2025-12-13 23:08:38,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:32:18] 2025-12-13 23:08:51,376 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:32:18] 2025-12-13 23:08:52,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310440851264)>', '<ExcThread(monitor, started 140310097143552)>']
[2025-12-13 18:32:18] 2025-12-13 23:08:52,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:32:18] 2025-12-13 23:08:52,972 | INFO     | [monitor] control thread has ended
[2025-12-13 18:32:18] 2025-12-13 23:08:57,634 | INFO     | all workflow threads have been joined
[2025-12-13 18:32:18] 2025-12-13 23:08:57,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:32:18] 2025-12-13 23:08:57,635 | INFO     | traces error code: 0
[2025-12-13 18:32:18] 2025-12-13 23:08:57,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:32:18] 2025-12-13 23:09:00,855 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:32:18] 2025-12-13 23:09:00,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:32:18] 2025-12-13 23:09:00,955 [wrapper] pilotpid: 2072048
[2025-12-13 18:32:18] 2025-12-13 23:09:01,043 [wrapper] Pilot exit status: 0
[2025-12-13 18:32:18] 2025-12-13 23:09:01,176 [wrapper] pandaids: 6929288962
[2025-12-13 18:32:18] 2025-12-13 23:09:01,299 [wrapper] cleanup supervisor_pilot 3403822 2072049
[2025-12-13 18:32:18] 2025-12-13 23:09:01,315 [wrapper] Test setup, not cleaning
[2025-12-13 18:32:18] 2025-12-13 23:09:01,333 [wrapper] apfmon messages muted
[2025-12-13 18:32:18] 2025-12-13 23:09:01,358 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:32:18] 2025-12-13 23:09:01,361 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:32:18]  *** Error codes and diagnostics ***
[2025-12-13 18:32:18]     "exeErrorCode": 0,
[2025-12-13 18:32:18]     "exeErrorDiag": "",
[2025-12-13 18:32:18]     "pilotErrorCode": 0,
[2025-12-13 18:32:18]     "pilotErrorDiag": "",
[2025-12-13 18:32:18]  *** Listing of results directory ***
[2025-12-13 18:32:18] total 418324
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 18:32:18] -rwx------. 1 boincer umatlas     36322 Dec 13 05:06 runpilot2-wrapper.sh
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 05:11 queuedata.json
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas       100 Dec 13 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:32:18] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 09:12 run_atlas
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas       105 Dec 13 09:12 job.xml
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas 218573507 Dec 13 09:12 EVNT.47898779._000120.pool.root.1
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 09:12 start_atlas.sh
[2025-12-13 18:32:18] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 09:12 shared
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas    592394 Dec 13 09:12 input.tar.gz
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas         0 Dec 13 09:12 boinc_lockfile
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas      2523 Dec 13 09:12 pandaJob.out
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas        57 Dec 13 09:12 setup.sh.local
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas    991736 Dec 13 09:12 agis_schedconf.cvmfs.json
[2025-12-13 18:32:18] drwx------. 5 boincer umatlas      4096 Dec 13 09:12 pilot3
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas 196861171 Dec 13 18:06 HITS.47898782._002814.pool.root.1
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas       531 Dec 13 18:06 boinc_task_state.xml
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas      1053 Dec 13 18:07 memory_monitor_summary.json
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas   1516240 Dec 13 18:07 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas    675838 Dec 13 18:07 log.47898782._002814.job.log.tgz.1
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas      7818 Dec 13 18:08 heartbeat.json
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas        95 Dec 13 18:08 pilot_heartbeat.json
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas      5010 Dec 13 18:08 pilotlog.txt
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas   3831301 Dec 13 18:09 log.47898782._002814.job.log.1
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas       357 Dec 13 18:09 output.list
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas       620 Dec 13 18:09 runtime_log
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas   4526080 Dec 13 18:09 result.tar.gz
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas      9348 Dec 13 18:09 runtime_log.err
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas       659 Dec 13 18:09 OPaNDm4gbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP6SKDmJoatEn.diag
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas      6844 Dec 13 18:30 init_data.xml
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas        28 Dec 13 18:32 wrapper_checkpoint.txt
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 18:32 boinc_mmap_file
[2025-12-13 18:32:18] -rw-r--r--. 1 boincer umatlas     21497 Dec 13 18:32 stderr.txt
[2025-12-13 18:32:18] HITS file was successfully produced:
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas 196861171 Dec 13 18:06 shared/HITS.pool.root.1
[2025-12-13 18:32:18]  *** Contents of shared directory: ***
[2025-12-13 18:32:18] total 410720
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas 218573507 Dec 13 09:12 ATLAS.root_0
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 09:12 start_atlas.sh
[2025-12-13 18:32:18] -rw-r--r--. 2 boincer umatlas    592394 Dec 13 09:12 input.tar.gz
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas 196861171 Dec 13 18:06 HITS.pool.root.1
[2025-12-13 18:32:18] -rw-------. 1 boincer umatlas   4526080 Dec 13 18:09 result.tar.gz
18:32:20 (2065120): run_atlas exited; CPU time 58798.632011
18:32:20 (2065120): called boinc_finish(0)

</stderr_txt>
]]>

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