Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:45 (989844): wrapper (7.7.26015): starting
06:09:45 (989844): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 06:09:45] Arguments: --nthreads 12
[2025-12-13 06:09:45] Threads: 12
[2025-12-13 06:09:45] Checking for CVMFS
[2025-12-13 06:09:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:09:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:09:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:09:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:09:46] 2.11.5.0 3817131 52667 399932 153962 1 827 24432511 45568000 10224 130560 0 408744233 99.781 264128609 22556 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-12-13 06:09:46] CVMFS is ok
[2025-12-13 06:09:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:09:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 06:09:46] Further information can be found at the LHC@home message board.
[2025-12-13 06:09:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:09:46] Checking for apptainer binary...
[2025-12-13 06:09:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 06:09:46] Running /usr/bin/apptainer --version
[2025-12-13 06:09:46] apptainer version 1.4.1-1.el9
[2025-12-13 06:09:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:09:47] wns0035.triumf.lcg
[2025-12-13 06:09:47] apptainer works
[2025-12-13 06:09:47] Set ATHENA_PROC_NUMBER=12
[2025-12-13 06:09:47] Set ATHENA_CORE_NUMBER=12
[2025-12-13 06:09:47] Starting ATLAS job with PandaID=6929264673
[2025-12-13 06:09:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:14:35]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | wrong length of table data, x=[1765635087.0], y=[996.0] (must be same and length>=4)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | could have reported an average CPU frequency of 2487 MHz (4 samples)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . Timing measurements:
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . get job = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . initial setup = 5 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . payload setup = 19 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-in = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . payload execution = 34 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-out = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . log creation = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929264673/pilotlog.txt
[2025-12-13 06:14:35] 2025-12-13 14:14:02,355 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 06:14:35] - Log from pilotlog.txt -
[2025-12-13 06:14:35] 2025-12-13 14:14:02,341 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929264673/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | INFO     | extracted standard info from prmon json
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | wrong length of table data, x=[1765635087.0], y=[996.0] (must be same and length>=4)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | could have reported an average CPU frequency of 2487 MHz (4 samples)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . Timing measurements:
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . get job = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . initial setup = 5 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . payload setup = 19 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-in = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . payload execution = 34 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-out = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . log creation = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929264673/pilotlog.txt
[2025-12-13 06:14:35] 2025-12-13 14:14:02,356 | WARNING  | 
[2025-12-13 06:14:35] [begin log extracts]
[2025-12-13 06:14:35] - Log from pilotlog.txt -
[2025-12-13 06:14:35] 2025-12-13 14:14:02,341 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929264673/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | INFO     | extracted standard info from prmon json
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:14:35] 2025-12-13 14:14:02,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | WARNING  | wrong length of table data, x=[1765635087.0], y=[996.0] (must be same and length>=4)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | could have reported an average CPU frequency of 2487 MHz (4 samples)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . Timing measurements:
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . get job = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . initial setup = 5 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,343 | INFO     | . payload setup = 19 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-in = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . payload execution = 34 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . stage-out = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | . log creation = 0 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | ..............................
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 06:14:35] 2025-12-13 14:14:02,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929264673/pilotlog.txt
[2025-12-13 06:14:35] [end log extracts]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,356 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,357 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | 
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | job summary report
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | --------------------------------------------------
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | PanDA job id: 6929264673
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | task id: 47898763
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 06:11:41,391 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | pilot state: failed 
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | transexitcode: 65
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | exeerrorcode: 65
[2025-12-13 06:14:35] 2025-12-13 14:14:02,412 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | exitcode: 65
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | cpuconsumptiontime: 17 s
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | nevents: 0
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | neventsw: 0
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | pid: 1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | pgrp: 1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | corecount: 12
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | event service: False
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | sizes: {0: 2283121, 1: 2283974, 2: 2283974, 13: 2284320, 59: 2307556, 62: 2311848, 63: 2312004, 191: 2312170}
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | --------------------------------------------------
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | 
[2025-12-13 06:14:35] 2025-12-13 14:14:02,413 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 06:14:35] 2025-12-13 14:14:02,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:14:35] 2025-12-13 14:14:02,429 | INFO     | job 6929264673 has completed (purged errors)
[2025-12-13 06:14:35] 2025-12-13 14:14:02,429 | INFO     | overall cleanup function is called
[2025-12-13 06:14:35] 2025-12-13 14:14:03,436 | INFO     | --- collectZombieJob: --- 10, [1000491]
[2025-12-13 06:14:35] 2025-12-13 14:14:03,436 | INFO     | zombie collector waiting for pid 1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:03,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:14:35] 2025-12-13 14:14:03,437 | INFO     | collected zombie processes
[2025-12-13 06:14:35] 2025-12-13 14:14:03,437 | INFO     | will attempt to kill all subprocesses of pid=1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:04,606 | INFO     | process IDs to be killed: [1000491] (in reverse order)
[2025-12-13 06:14:35] 2025-12-13 14:14:04,820 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:14:35] 2025-12-13 14:14:04,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:14:35] 2025-12-13 14:14:04,840 | INFO     | did not find any defunct processes belonging to 1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:04,874 | INFO     | did not find any defunct processes belonging to 1000491
[2025-12-13 06:14:35] 2025-12-13 14:14:04,874 | INFO     | ready for new job
[2025-12-13 06:14:35] 2025-12-13 14:14:04,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:14:35] 2025-12-13 14:14:04,898 | INFO     | ***************************************
[2025-12-13 06:14:35] 2025-12-13 14:14:04,898 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:14:35] 2025-12-13 14:14:04,898 | INFO     | ***************************************
[2025-12-13 06:14:35] 2025-12-13 14:14:04,898 | INFO     | 
[2025-12-13 06:14:35] 2025-12-13 14:14:04,900 | INFO     | architecture information:
[2025-12-13 06:14:35] 2025-12-13 14:14:04,912 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:14:35] 2025-12-13 14:14:04,927 | INFO     | cat /etc/os-release:
[2025-12-13 06:14:35] NAME="CentOS Linux"
[2025-12-13 06:14:35] VERSION="7 (Core)"
[2025-12-13 06:14:35] ID="centos"
[2025-12-13 06:14:35] ID_LIKE="rhel fedora"
[2025-12-13 06:14:35] VERSION_ID="7"
[2025-12-13 06:14:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:14:35] ANSI_COLOR="0;31"
[2025-12-13 06:14:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:14:35] HOME_URL="https://www.centos.org/"
[2025-12-13 06:14:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:14:35] 
[2025-12-13 06:14:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:14:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:14:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:14:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:14:35] 
[2025-12-13 06:14:35] 2025-12-13 14:14:04,927 | INFO     | ***************************************
[2025-12-13 06:14:35] 2025-12-13 14:14:05,430 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 06:14:35] 2025-12-13 14:14:05,464 | INFO     | sufficient remaining disk space (2168588337152 B)
[2025-12-13 06:14:35] 2025-12-13 14:14:05,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:14:35] 2025-12-13 14:14:05,464 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:14:35] 2025-12-13 14:14:05,464 | INFO     | update_server=False
[2025-12-13 06:14:35] 2025-12-13 14:14:05,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:14:35] 2025-12-13 14:14:05,826 | INFO     | all job control threads have been joined
[2025-12-13 06:14:35] 2025-12-13 14:14:05,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:14:35] 2025-12-13 14:14:05,916 | INFO     | aborting loop
[2025-12-13 06:14:35] 2025-12-13 14:14:05,979 | INFO     | all payload control threads have been joined
[2025-12-13 06:14:35] 2025-12-13 14:14:06,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:14:35] 2025-12-13 14:14:06,108 | INFO     | all data control threads have been joined
[2025-12-13 06:14:35] 2025-12-13 14:14:06,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:14:35] 2025-12-13 14:14:06,471 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,551 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,552 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,667 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,733 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,832 | INFO     | [job] control thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,922 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:06,985 | INFO     | [payload] control thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:07,114 | INFO     | [data] control thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:07,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:14:35] 2025-12-13 14:14:07,543 | INFO     | [job] validate thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:07,722 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:07,794 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:08,065 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:08,465 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:10,345 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:14:35] 2025-12-13 14:14:12,076 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:14:35] 2025-12-13 14:14:12,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818303625024)>', '<ExcThread(monitor, started 139817459365632)>']
[2025-12-13 06:14:35] 2025-12-13 14:14:17,886 | INFO     | all workflow threads have been joined
[2025-12-13 06:14:35] 2025-12-13 14:14:17,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:14:35] 2025-12-13 14:14:17,887 | INFO     | traces error code: 0
[2025-12-13 06:14:35] 2025-12-13 14:14:17,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:14:35] 2025-12-13 14:14:35,313 | INFO     | PID=993628 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 06:14:35] 2025-12-13 14:14:35,313 | INFO     | .. there are 28 such processes running
[2025-12-13 06:14:35] 2025-12-13 14:14:35,314 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:14:35] 2025-12-13 14:14:35,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:14:35] 2025-12-13 14:14:35,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:14:35] 2025-12-13 14:14:35,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:14:35] 2025-12-13 14:14:35,314 | INFO     | [monitor] control thread has ended
[2025-12-13 06:14:35] 2025-12-13 14:14:35,425 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:14:35] 2025-12-13 14:14:35,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:14:35] 2025-12-13 14:14:35,428 [wrapper] pilotpid: 993628
[2025-12-13 06:14:35] 2025-12-13 14:14:35,430 [wrapper] Pilot exit status: 0
[2025-12-13 06:14:35] 2025-12-13 14:14:35,465 [wrapper] pandaids: 6929264673
[2025-12-13 06:14:35] 2025-12-13 14:14:35,526 [wrapper] cleanup supervisor_pilot  993638 993629
[2025-12-13 06:14:35] 2025-12-13 14:14:35,529 [wrapper] Test setup, not cleaning
[2025-12-13 06:14:35] 2025-12-13 14:14:35,531 [wrapper] apfmon messages muted
[2025-12-13 06:14:35] 2025-12-13 14:14:35,533 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:14:35] 2025-12-13 14:14:35,535 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:14:35]  *** Error codes and diagnostics ***
[2025-12-13 06:14:35]     "exeErrorCode": 65,
[2025-12-13 06:14:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 06:14:35]     "pilotErrorCode": 1305,
[2025-12-13 06:14:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 06:14:35]  *** Listing of results directory ***
[2025-12-13 06:14:35] total 221460
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc    579449 Dec 13 02:01 pilot3.tar.gz
[2025-12-13 06:14:35] -rwx------. 1 boinc boinc     36322 Dec 13 02:05 runpilot2-wrapper.sh
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc      5112 Dec 13 02:09 queuedata.json
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc       100 Dec 13 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:14:35] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 06:09 run_atlas
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc       105 Dec 13 06:09 job.xml
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc      6596 Dec 13 06:09 init_data.xml
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc 222636505 Dec 13 06:09 EVNT.47898761._000101.pool.root.1
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc     15847 Dec 13 06:09 start_atlas.sh
[2025-12-13 06:14:35] drwxrwx--x. 2 boinc boinc      4096 Dec 13 06:09 shared
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc    592390 Dec 13 06:09 input.tar.gz
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc         0 Dec 13 06:09 boinc_lockfile
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc      2503 Dec 13 06:09 pandaJob.out
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc    991736 Dec 13 06:10 agis_schedconf.cvmfs.json
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc   1516240 Dec 13 06:10 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:14:35] drwx------. 5 boinc boinc      4096 Dec 13 06:10 pilot3
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc       524 Dec 13 06:11 boinc_task_state.xml
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc       949 Dec 13 06:11 memory_monitor_summary.json
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc     21210 Dec 13 06:11 log.47898763._001878.job.log.tgz.1
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc      8387 Dec 13 06:14 heartbeat.json
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc      8192 Dec 13 06:14 boinc_mmap_file
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc        22 Dec 13 06:14 wrapper_checkpoint.txt
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc       822 Dec 13 06:14 pilotlog.txt
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc        95 Dec 13 06:14 pilot_heartbeat.json
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc     90197 Dec 13 06:14 log.47898763._001878.job.log.1
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc       188 Dec 13 06:14 output.list
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc       620 Dec 13 06:14 runtime_log
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc    133120 Dec 13 06:14 result.tar.gz
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc      8636 Dec 13 06:14 runtime_log.err
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc       643 Dec 13 06:14 nSFLDmjgbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyuOKDmck6GVn.diag
[2025-12-13 06:14:35] -rw-r--r--. 1 boinc boinc     21785 Dec 13 06:14 stderr.txt
[2025-12-13 06:14:35] No HITS result produced
[2025-12-13 06:14:35]  *** Contents of shared directory: ***
[2025-12-13 06:14:35] total 218148
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc 222636505 Dec 13 06:09 ATLAS.root_0
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc     15847 Dec 13 06:09 start_atlas.sh
[2025-12-13 06:14:35] -rw-r--r--. 2 boinc boinc    592390 Dec 13 06:09 input.tar.gz
[2025-12-13 06:14:35] -rw-------. 1 boinc boinc    133120 Dec 13 06:14 result.tar.gz
06:14:37 (989844): run_atlas exited; CPU time 26.167600
06:14:37 (989844): called boinc_finish(0)

</stderr_txt>
]]>

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