Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:28:26 (25603): wrapper (7.7.26015): starting
08:28:26 (25603): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 08:28:26] Arguments: --nthreads 12
[2025-12-13 08:28:26] Threads: 12
[2025-12-13 08:28:26] Checking for CVMFS
[2025-12-13 08:28:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 08:28:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 08:28:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 08:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 08:28:27] 2.11.2.0 2945 312222 94212 153962 0 58 13689337 20275200 1 130560 2 137250944 99.963 18426002 15430 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 08:28:27] CVMFS is ok
[2025-12-13 08:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 08:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 08:28:27] Further information can be found at the LHC@home message board.
[2025-12-13 08:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 08:28:27] Checking for apptainer binary...
[2025-12-13 08:28:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 08:28:27] Running /usr/bin/apptainer --version
[2025-12-13 08:28:27] apptainer version 1.3.2-1.el7
[2025-12-13 08:28:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 08:28:28] c-205-2.aglt2.org
[2025-12-13 08:28:28] apptainer works
[2025-12-13 08:28:28] Set ATHENA_PROC_NUMBER=12
[2025-12-13 08:28:28] Set ATHENA_CORE_NUMBER=12
[2025-12-13 08:28:28] Starting ATLAS job with PandaID=6929276313
[2025-12-13 08:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 10:04:59]  *** The last 200 lines of the pilot log: ***
[2025-12-13 10:04:59]  storage_token=
[2025-12-13 10:04:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929276313/log.47898836._001083.job.log.tgz.1
[2025-12-13 10:04:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/06/log.47898836._001083.job.log.tgz.1
[2025-12-13 10:04:59]  workdir=None
[2025-12-13 10:04:59] ]
[2025-12-13 10:04:59] 2025-12-13 15:03:59,200 | INFO     | transferring file log.47898836._001083.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929276313/log.47898836._001083.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 10:04:59] 2025-12-13 15:03:59,200 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929276313/log.47898836._001083.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._001083.job
[2025-12-13 10:04:59] 2025-12-13 15:03:59,222 | INFO     | adding to output.list: log.47898836._001083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/06/log.47898836._001083.job.log.tg
[2025-12-13 10:04:59] 2025-12-13 15:03:59,223 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 10:04:59] 2025-12-13 15:03:59,223 | INFO     | summary of transferred files:
[2025-12-13 10:04:59] 2025-12-13 15:03:59,223 | INFO     |  -- lfn=log.47898836._001083.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 10:04:59] 2025-12-13 15:03:59,224 | INFO     | stage-out finished correctly
[2025-12-13 10:04:59] 2025-12-13 15:03:59,385 | WARNING  | process 3436 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 10:04:59] 2025-12-13 15:03:59,385 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929276313/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:04:59] 2025-12-13 15:03:59,475 | INFO     | number of running child processes to parent process 3436: 1
[2025-12-13 10:04:59] 2025-12-13 15:03:59,476 | INFO     | maximum number of monitored processes: 6
[2025-12-13 10:04:59] 2025-12-13 15:04:00,848 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 10:04:59] 2025-12-13 15:04:00,875 | INFO     | time since job start (5716s) is within the limit (174528.0s)
[2025-12-13 10:04:59] 2025-12-13 15:04:01,979 | INFO     | monitor loop #423: job 0:6929276313 is in state 'finished'
[2025-12-13 10:04:59] 2025-12-13 15:04:01,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 10:04:59] 2025-12-13 15:04:02,847 | INFO     | job 6929276313 has state=finished
[2025-12-13 10:04:59] 2025-12-13 15:04:02,847 | INFO     | preparing for final server update for job 6929276313 in state='finished'
[2025-12-13 10:04:59] 2025-12-13 15:04:02,847 | INFO     | this job has now completed (state=finished)
[2025-12-13 10:04:59] 2025-12-13 15:04:02,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 10:04:59] 2025-12-13 15:04:02,848 | INFO     | log transfer has been attempted: DONE
[2025-12-13 10:04:59] 2025-12-13 15:04:02,848 | INFO     | job 6929276313 has finished - writing final server update
[2025-12-13 10:04:59] 2025-12-13 15:04:02,848 | INFO     | total number of processed events: 400 (read)
[2025-12-13 10:04:59] 2025-12-13 15:04:02,849 | INFO     | executing command: lscpu
[2025-12-13 10:04:59] 2025-12-13 15:04:02,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 10:04:59] 2025-12-13 15:04:02,885 | INFO     | time since job start (5718s) is within the limit (174528.0s)
[2025-12-13 10:04:59] 2025-12-13 15:04:02,886 | INFO     | 5721s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-13 10:04:59] 2025-12-13 15:04:04,493 | INFO     | monitor loop #424: job 0:6929276313 is in state 'finished'
[2025-12-13 10:04:59] 2025-12-13 15:04:04,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 10:04:59] 2025-12-13 15:04:04,891 | INFO     | time since job start (5720s) is within the limit (174528.0s)
[2025-12-13 10:04:59] 2025-12-13 15:04:06,897 | INFO     | time since job start (5722s) is within the limit (174528.0s)
[2025-12-13 10:04:59] 2025-12-13 15:04:06,996 | INFO     | monitor loop #425: job 0:6929276313 is in state 'finished'
[2025-12-13 10:04:59] 2025-12-13 15:04:06,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,663 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 10:04:59] 2025-12-13 15:04:07,667 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-13 10:04:59] 2025-12-13 15:04:07,669 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929276313/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,670 | INFO     | extracted standard info from prmon json
[2025-12-13 10:04:59] 2025-12-13 15:04:07,670 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 10:04:59] 2025-12-13 15:04:07,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 10:04:59] 2025-12-13 15:04:07,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 10:04:59] 2025-12-13 15:04:07,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:04:59] 2025-12-13 15:04:07,672 | INFO     | fitting pss+swap vs Time
[2025-12-13 10:04:59] 2025-12-13 15:04:07,673 | INFO     | sum of square deviations: 204163828.0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,673 | INFO     | sum of deviations: -14939391172.0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,673 | INFO     | mean x: 1765635481.0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,673 | INFO     | mean y: 2801702.83908046
[2025-12-13 10:04:59] 2025-12-13 15:04:07,673 | INFO     | intersect: 129200610032.63475
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | chi2: 0.06812052427654378
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | current memory leak: -73.17 B/s (using 87 data points, chi2=0.07)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | could have reported an average CPU frequency of 2149 MHz (7 samples)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | ..............................
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | . Timing measurements:
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | . get job = 0 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,674 | INFO     | . initial setup = 2 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | . payload setup = 7 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | . stage-in = 0 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | . payload execution = 5687 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | . stage-out = 0 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | . log creation = 0 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,675 | INFO     | ..............................
[2025-12-13 10:04:59] 2025-12-13 15:04:07,755 | INFO     | 
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | job summary report
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | --------------------------------------------------
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | PanDA job id: 6929276313
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | task id: 47898836
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | errors: (none)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | pilot state: finished 
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | transexitcode: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | exeerrorcode: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | exeerrordiag: 
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | exitcode: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,757 | INFO     | exitmsg: OK
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | cpuconsumptiontime: 63978 s
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | nevents: 400
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | neventsw: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | pid: 3436
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | pgrp: 3436
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | corecount: 12
[2025-12-13 10:04:59] 2025-12-13 15:04:07,758 | INFO     | event service: False
[2025-12-13 10:04:59] 2025-12-13 15:04:07,759 | INFO     | sizes: {0: 2284006, 5: 2284268, 11: 2284324, 5697: 2310963, 5698: 2319961, 5700: 2320017, 5707: 2320339}
[2025-12-13 10:04:59] 2025-12-13 15:04:07,759 | INFO     | --------------------------------------------------
[2025-12-13 10:04:59] 2025-12-13 15:04:07,759 | INFO     | 
[2025-12-13 10:04:59] 2025-12-13 15:04:07,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 10:04:59] 2025-12-13 15:04:07,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,788 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,788 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 10:04:59] 2025-12-13 15:04:07,788 | INFO     | job 6929276313 has completed (purged errors)
[2025-12-13 10:04:59] 2025-12-13 15:04:07,789 | INFO     | overall cleanup function is called
[2025-12-13 10:04:59] 2025-12-13 15:04:08,796 | INFO     | --- collectZombieJob: --- 10, [3436]
[2025-12-13 10:04:59] 2025-12-13 15:04:08,796 | INFO     | zombie collector waiting for pid 3436
[2025-12-13 10:04:59] 2025-12-13 15:04:08,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 10:04:59] 2025-12-13 15:04:08,796 | INFO     | collected zombie processes
[2025-12-13 10:04:59] 2025-12-13 15:04:08,797 | INFO     | will attempt to kill all subprocesses of pid=3436
[2025-12-13 10:04:59] 2025-12-13 15:04:08,888 | INFO     | process IDs to be killed: [3436] (in reverse order)
[2025-12-13 10:04:59] 2025-12-13 15:04:08,941 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 10:04:59] 2025-12-13 15:04:08,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 10:04:59] 2025-12-13 15:04:08,946 | INFO     | did not find any defunct processes belonging to 3436
[2025-12-13 10:04:59] 2025-12-13 15:04:08,949 | INFO     | did not find any defunct processes belonging to 3436
[2025-12-13 10:04:59] 2025-12-13 15:04:08,950 | INFO     | ready for new job
[2025-12-13 10:04:59] 2025-12-13 15:04:08,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 10:04:59] 2025-12-13 15:04:08,951 | INFO     | ***************************************
[2025-12-13 10:04:59] 2025-12-13 15:04:08,951 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 10:04:59] 2025-12-13 15:04:08,951 | INFO     | ***************************************
[2025-12-13 10:04:59] 2025-12-13 15:04:08,951 | INFO     | 
[2025-12-13 10:04:59] 2025-12-13 15:04:08,952 | INFO     | architecture information:
[2025-12-13 10:04:59] 2025-12-13 15:04:08,952 | INFO     | executing command: cat /etc/os-release
[2025-12-13 10:04:59] 2025-12-13 15:04:08,966 | INFO     | cat /etc/os-release:
[2025-12-13 10:04:59] NAME="CentOS Linux"
[2025-12-13 10:04:59] VERSION="7 (Core)"
[2025-12-13 10:04:59] ID="centos"
[2025-12-13 10:04:59] ID_LIKE="rhel fedora"
[2025-12-13 10:04:59] VERSION_ID="7"
[2025-12-13 10:04:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 10:04:59] ANSI_COLOR="0;31"
[2025-12-13 10:04:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 10:04:59] HOME_URL="https://www.centos.org/"
[2025-12-13 10:04:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 10:04:59] 
[2025-12-13 10:04:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 10:04:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 10:04:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 10:04:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 10:04:59] 
[2025-12-13 10:04:59] 2025-12-13 15:04:08,967 | INFO     | ***************************************
[2025-12-13 10:04:59] 2025-12-13 15:04:09,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 10:04:59] 2025-12-13 15:04:09,487 | INFO     | sufficient remaining disk space (29433528320 B)
[2025-12-13 10:04:59] 2025-12-13 15:04:09,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 10:04:59] 2025-12-13 15:04:09,488 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 10:04:59] 2025-12-13 15:04:09,488 | INFO     | update_server=False
[2025-12-13 10:04:59] 2025-12-13 15:04:09,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 10:04:59] 2025-12-13 15:04:09,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:04:59] 2025-12-13 15:04:09,507 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 10:04:59] 2025-12-13 15:04:09,507 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 10:04:59] 2025-12-13 15:04:09,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:04:59] 2025-12-13 15:04:09,507 | INFO     | will abort loop
[2025-12-13 10:04:59] 2025-12-13 15:04:09,547 | INFO     | all payload control threads have been joined
[2025-12-13 10:04:59] 2025-12-13 15:04:09,725 | INFO     | all job control threads have been joined
[2025-12-13 10:04:59] 2025-12-13 15:04:09,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 10:04:59] 2025-12-13 15:04:10,204 | INFO     | all data control threads have been joined
[2025-12-13 10:04:59] 2025-12-13 15:04:10,494 | INFO     | [job] retrieve thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,494 | INFO     | [job] queue monitor thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,510 | INFO     | [job] job monitor thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,553 | INFO     | [payload] control thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,638 | INFO     | [payload] failed_post thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,731 | INFO     | [job] control thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,922 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:10,989 | INFO     | [data] copytool_in thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,209 | INFO     | [data] control thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 10:04:59] 2025-12-13 15:04:11,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,563 | INFO     | [job] validate thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,799 | INFO     | [payload] validate_post thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,822 | INFO     | [data] copytool_out thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,860 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:11,866 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:15,441 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 10:04:59] 2025-12-13 15:04:40,103 | INFO     | PID=29287 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 10:04:59] 2025-12-13 15:04:40,103 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 10:04:59] 2025-12-13 15:04:40,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 10:04:59] 2025-12-13 15:04:40,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 10:04:59] 2025-12-13 15:04:53,029 | INFO     | [monitor] cgroup control has ended
[2025-12-13 10:04:59] 2025-12-13 15:04:53,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139776290244416)>', '<ExcThread(monitor, started 139775323391744)>']
[2025-12-13 10:04:59] 2025-12-13 15:04:54,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 10:04:59] 2025-12-13 15:04:54,158 | INFO     | [monitor] control thread has ended
[2025-12-13 10:04:59] 2025-12-13 15:04:58,649 | INFO     | all workflow threads have been joined
[2025-12-13 10:04:59] 2025-12-13 15:04:58,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 10:04:59] 2025-12-13 15:04:58,649 | INFO     | traces error code: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:58,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 10:04:59] 2025-12-13 15:04:58,805 [wrapper] ==== pilot stdout END ====
[2025-12-13 10:04:59] 2025-12-13 15:04:58,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 10:04:59] 2025-12-13 15:04:58,813 [wrapper] pilotpid: 29287
[2025-12-13 10:04:59] 2025-12-13 15:04:58,817 [wrapper] Pilot exit status: 0
[2025-12-13 10:04:59] 2025-12-13 15:04:58,833 [wrapper] pandaids: 6929276313
[2025-12-13 10:04:59] 2025-12-13 15:04:58,885 [wrapper] cleanup supervisor_pilot  3026 29288
[2025-12-13 10:04:59] 2025-12-13 15:04:58,889 [wrapper] Test setup, not cleaning
[2025-12-13 10:04:59] 2025-12-13 15:04:58,893 [wrapper] apfmon messages muted
[2025-12-13 10:04:59] 2025-12-13 15:04:58,897 [wrapper] ==== wrapper stdout END ====
[2025-12-13 10:04:59] 2025-12-13 15:04:58,900 [wrapper] ==== wrapper stderr END ====
[2025-12-13 10:04:59]  *** Error codes and diagnostics ***
[2025-12-13 10:04:59]     "exeErrorCode": 0,
[2025-12-13 10:04:59]     "exeErrorDiag": "",
[2025-12-13 10:04:59]     "pilotErrorCode": 0,
[2025-12-13 10:04:59]     "pilotErrorDiag": "",
[2025-12-13 10:04:59]  *** Listing of results directory ***
[2025-12-13 10:04:59] total 403408
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 10:04:59] -rwx------ 1 boincer umatlas     36322 Dec 13 05:04 runpilot2-wrapper.sh
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:07 queuedata.json
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas       100 Dec 13 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 10:04:59] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 08:28 run_atlas
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas       105 Dec 13 08:28 job.xml
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas 213923969 Dec 13 08:28 EVNT.47898833._000044.pool.root.1
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:28 start_atlas.sh
[2025-12-13 10:04:59] drwxrwx--x 2 boincer umatlas      4096 Dec 13 08:28 shared
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas    592401 Dec 13 08:28 input.tar.gz
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas         0 Dec 13 08:28 boinc_lockfile
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas      2549 Dec 13 08:28 pandaJob.out
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas        57 Dec 13 08:28 setup.sh.local
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas    991736 Dec 13 08:28 agis_schedconf.cvmfs.json
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas   1516240 Dec 13 08:28 agis_ddmendpoints.agis.ALL.json
[2025-12-13 10:04:59] drwx------ 5 boincer umatlas      4096 Dec 13 08:28 pilot3
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas 192825866 Dec 13 10:03 HITS.47898836._001083.pool.root.1
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas       529 Dec 13 10:03 boinc_task_state.xml
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas      1046 Dec 13 10:03 memory_monitor_summary.json
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas    395234 Dec 13 10:03 log.47898836._001083.job.log.tgz.1
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas        95 Dec 13 10:03 pilot_heartbeat.json
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas      7848 Dec 13 10:04 heartbeat.json
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas      5951 Dec 13 10:04 init_data.xml
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas        27 Dec 13 10:04 wrapper_checkpoint.txt
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 10:04 boinc_mmap_file
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas      4932 Dec 13 10:04 pilotlog.txt
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas    815307 Dec 13 10:04 log.47898836._001083.job.log.1
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas       357 Dec 13 10:04 output.list
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas       620 Dec 13 10:04 runtime_log
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas   1228800 Dec 13 10:04 result.tar.gz
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 10:04 runtime_log.err
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas       658 Dec 13 10:04 26GMDmPfbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkrOKDmjCuGyn.diag
[2025-12-13 10:04:59] -rw-r--r-- 1 boincer umatlas     22260 Dec 13 10:04 stderr.txt
[2025-12-13 10:04:59] HITS file was successfully produced:
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas 192825866 Dec 13 10:03 shared/HITS.pool.root.1
[2025-12-13 10:04:59]  *** Contents of shared directory: ***
[2025-12-13 10:04:59] total 399020
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas 213923969 Dec 13 08:28 ATLAS.root_0
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:28 start_atlas.sh
[2025-12-13 10:04:59] -rw-r--r-- 2 boincer umatlas    592401 Dec 13 08:28 input.tar.gz
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas 192825866 Dec 13 10:03 HITS.pool.root.1
[2025-12-13 10:04:59] -rw------- 1 boincer umatlas   1228800 Dec 13 10:04 result.tar.gz
10:05:00 (25603): run_atlas exited; CPU time 63962.358584
10:05:00 (25603): called boinc_finish(0)

</stderr_txt>
]]>

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