Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:23 (24771): wrapper (7.7.26015): starting
08:30:23 (24771): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 08:30:23] Arguments: --nthreads 12
[2025-12-13 08:30:23] Threads: 12
[2025-12-13 08:30:23] Checking for CVMFS
[2025-12-13 08:30:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 08:30:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 08:30:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 08:30:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 08:30:23] 2.11.2.0 2991 312178 92316 153962 0 59 15515565 20275200 1 130560 1 137452682 99.959 19056942 15394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 08:30:23] CVMFS is ok
[2025-12-13 08:30:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 08:30:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 08:30:23] Further information can be found at the LHC@home message board.
[2025-12-13 08:30:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 08:30:23] Checking for apptainer binary...
[2025-12-13 08:30:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 08:30:23] Running /usr/bin/apptainer --version
[2025-12-13 08:30:23] apptainer version 1.3.2-1.el7
[2025-12-13 08:30:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 08:30:25] c-205-32.aglt2.org
[2025-12-13 08:30:25] apptainer works
[2025-12-13 08:30:25] Set ATHENA_PROC_NUMBER=12
[2025-12-13 08:30:25] Set ATHENA_CORE_NUMBER=12
[2025-12-13 08:30:25] Starting ATLAS job with PandaID=6929276331
[2025-12-13 08:30:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 10:11:04]  *** The last 200 lines of the pilot log: ***
[2025-12-13 10:11:04]  mtime=0
[2025-12-13 10:11:04]  protocol_id=None
[2025-12-13 10:11:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 10:11:04]  replicas=None
[2025-12-13 10:11:04]  scope=mc23_13p6TeV
[2025-12-13 10:11:04]  status=None
[2025-12-13 10:11:04]  status_code=0
[2025-12-13 10:11:04]  storage_token=
[2025-12-13 10:11:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929276331/log.47898836._001101.job.log.tgz.1
[2025-12-13 10:11:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/10/log.47898836._001101.job.log.tgz.1
[2025-12-13 10:11:04]  workdir=None
[2025-12-13 10:11:04] ]
[2025-12-13 10:11:04] 2025-12-13 15:10:25,523 | INFO     | transferring file log.47898836._001101.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929276331/log.47898836._001101.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 10:11:04] 2025-12-13 15:10:25,523 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929276331/log.47898836._001101.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._001101.job
[2025-12-13 10:11:04] 2025-12-13 15:10:25,545 | INFO     | adding to output.list: log.47898836._001101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/10/log.47898836._001101.job.log.tg
[2025-12-13 10:11:04] 2025-12-13 15:10:25,546 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 10:11:04] 2025-12-13 15:10:25,546 | INFO     | summary of transferred files:
[2025-12-13 10:11:04] 2025-12-13 15:10:25,546 | INFO     |  -- lfn=log.47898836._001101.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 10:11:04] 2025-12-13 15:10:25,547 | INFO     | stage-out finished correctly
[2025-12-13 10:11:04] 2025-12-13 15:10:26,774 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 10:11:04] 2025-12-13 15:10:26,833 | INFO     | time since job start (5987s) is within the limit (174528.0s)
[2025-12-13 10:11:04] 2025-12-13 15:10:26,853 | INFO     | job 6929276331 has state=finished
[2025-12-13 10:11:04] 2025-12-13 15:10:26,853 | INFO     | preparing for final server update for job 6929276331 in state='finished'
[2025-12-13 10:11:04] 2025-12-13 15:10:26,854 | INFO     | this job has now completed (state=finished)
[2025-12-13 10:11:04] 2025-12-13 15:10:26,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 10:11:04] 2025-12-13 15:10:26,854 | INFO     | log transfer has been attempted: DONE
[2025-12-13 10:11:04] 2025-12-13 15:10:26,855 | INFO     | job 6929276331 has finished - writing final server update
[2025-12-13 10:11:04] 2025-12-13 15:10:26,855 | INFO     | total number of processed events: 400 (read)
[2025-12-13 10:11:04] 2025-12-13 15:10:26,856 | INFO     | executing command: lscpu
[2025-12-13 10:11:04] 2025-12-13 15:10:26,881 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 10:11:04] 2025-12-13 15:10:28,794 | WARNING  | process 2590 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 10:11:04] 2025-12-13 15:10:28,795 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929276331/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:11:04] 2025-12-13 15:10:28,838 | INFO     | time since job start (5989s) is within the limit (174528.0s)
[2025-12-13 10:11:04] 2025-12-13 15:10:28,884 | INFO     | number of running child processes to parent process 2590: 1
[2025-12-13 10:11:04] 2025-12-13 15:10:28,884 | INFO     | maximum number of monitored processes: 6
[2025-12-13 10:11:04] 2025-12-13 15:10:30,844 | INFO     | time since job start (5991s) is within the limit (174528.0s)
[2025-12-13 10:11:04] 2025-12-13 15:10:31,387 | INFO     | monitor loop #442: job 0:6929276331 is in state 'finished'
[2025-12-13 10:11:04] 2025-12-13 15:10:31,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,687 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 10:11:04] 2025-12-13 15:10:32,691 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-13 10:11:04] 2025-12-13 15:10:32,693 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929276331/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,694 | INFO     | extracted standard info from prmon json
[2025-12-13 10:11:04] 2025-12-13 15:10:32,694 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 10:11:04] 2025-12-13 15:10:32,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 10:11:04] 2025-12-13 15:10:32,694 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 10:11:04] 2025-12-13 15:10:32,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:11:04] 2025-12-13 15:10:32,697 | INFO     | fitting pss+swap vs Time
[2025-12-13 10:11:04] 2025-12-13 15:10:32,697 | INFO     | sum of square deviations: 233641590.0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | sum of deviations: -14059562613.0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | mean x: 1765635717.0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | mean y: 2789270.4065934066
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | intersect: 106251278312.57863
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | chi2: 0.10292647752919823
[2025-12-13 10:11:04] 2025-12-13 15:10:32,698 | INFO     | current memory leak: -60.18 B/s (using 91 data points, chi2=0.10)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | could have reported an average CPU frequency of 2141 MHz (7 samples)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | ..............................
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | . Timing measurements:
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | . get job = 0 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | . initial setup = 2 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | . payload setup = 6 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,699 | INFO     | . stage-in = 0 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,700 | INFO     | . payload execution = 5959 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,700 | INFO     | . stage-out = 0 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,700 | INFO     | . log creation = 0 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,700 | INFO     | ..............................
[2025-12-13 10:11:04] 2025-12-13 15:10:32,780 | INFO     | 
[2025-12-13 10:11:04] 2025-12-13 15:10:32,780 | INFO     | job summary report
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | --------------------------------------------------
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | PanDA job id: 6929276331
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | task id: 47898836
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | errors: (none)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | pilot state: finished 
[2025-12-13 10:11:04] 2025-12-13 15:10:32,781 | INFO     | transexitcode: 0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | exeerrorcode: 0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | exeerrordiag: 
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | exitcode: 0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | exitmsg: OK
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | cpuconsumptiontime: 66325 s
[2025-12-13 10:11:04] 2025-12-13 15:10:32,782 | INFO     | nevents: 400
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | neventsw: 0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | pid: 2590
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | pgrp: 2590
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | corecount: 12
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | event service: False
[2025-12-13 10:11:04] 2025-12-13 15:10:32,783 | INFO     | sizes: {0: 2284000, 5: 2284262, 11: 2284318, 5969: 2311039, 5970: 2320037, 5971: 2320093, 5977: 2320415}
[2025-12-13 10:11:04] 2025-12-13 15:10:32,784 | INFO     | --------------------------------------------------
[2025-12-13 10:11:04] 2025-12-13 15:10:32,784 | INFO     | 
[2025-12-13 10:11:04] 2025-12-13 15:10:32,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 10:11:04] 2025-12-13 15:10:32,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 10:11:04] 2025-12-13 15:10:32,810 | INFO     | job 6929276331 has completed (purged errors)
[2025-12-13 10:11:04] 2025-12-13 15:10:32,811 | INFO     | overall cleanup function is called
[2025-12-13 10:11:04] 2025-12-13 15:10:33,818 | INFO     | --- collectZombieJob: --- 10, [2590]
[2025-12-13 10:11:04] 2025-12-13 15:10:33,819 | INFO     | zombie collector waiting for pid 2590
[2025-12-13 10:11:04] 2025-12-13 15:10:33,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 10:11:04] 2025-12-13 15:10:33,819 | INFO     | collected zombie processes
[2025-12-13 10:11:04] 2025-12-13 15:10:33,819 | INFO     | will attempt to kill all subprocesses of pid=2590
[2025-12-13 10:11:04] 2025-12-13 15:10:33,908 | INFO     | process IDs to be killed: [2590] (in reverse order)
[2025-12-13 10:11:04] 2025-12-13 15:10:33,959 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 10:11:04] 2025-12-13 15:10:33,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 10:11:04] 2025-12-13 15:10:33,962 | INFO     | did not find any defunct processes belonging to 2590
[2025-12-13 10:11:04] 2025-12-13 15:10:33,966 | INFO     | did not find any defunct processes belonging to 2590
[2025-12-13 10:11:04] 2025-12-13 15:10:33,966 | INFO     | ready for new job
[2025-12-13 10:11:04] 2025-12-13 15:10:33,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 10:11:04] 2025-12-13 15:10:33,967 | INFO     | ***************************************
[2025-12-13 10:11:04] 2025-12-13 15:10:33,968 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 10:11:04] 2025-12-13 15:10:33,968 | INFO     | ***************************************
[2025-12-13 10:11:04] 2025-12-13 15:10:33,968 | INFO     | 
[2025-12-13 10:11:04] 2025-12-13 15:10:33,968 | INFO     | architecture information:
[2025-12-13 10:11:04] 2025-12-13 15:10:33,969 | INFO     | executing command: cat /etc/os-release
[2025-12-13 10:11:04] 2025-12-13 15:10:33,984 | INFO     | cat /etc/os-release:
[2025-12-13 10:11:04] NAME="CentOS Linux"
[2025-12-13 10:11:04] VERSION="7 (Core)"
[2025-12-13 10:11:04] ID="centos"
[2025-12-13 10:11:04] ID_LIKE="rhel fedora"
[2025-12-13 10:11:04] VERSION_ID="7"
[2025-12-13 10:11:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 10:11:04] ANSI_COLOR="0;31"
[2025-12-13 10:11:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 10:11:04] HOME_URL="https://www.centos.org/"
[2025-12-13 10:11:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 10:11:04] 
[2025-12-13 10:11:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 10:11:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 10:11:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 10:11:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 10:11:04] 
[2025-12-13 10:11:04] 2025-12-13 15:10:33,984 | INFO     | ***************************************
[2025-12-13 10:11:04] 2025-12-13 15:10:34,487 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 10:11:04] 2025-12-13 15:10:34,504 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-12-13 10:11:04] 2025-12-13 15:10:34,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 10:11:04] 2025-12-13 15:10:34,505 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 10:11:04] 2025-12-13 15:10:34,505 | INFO     | update_server=False
[2025-12-13 10:11:04] 2025-12-13 15:10:34,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 10:11:04] 2025-12-13 15:10:34,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 10:11:04] 2025-12-13 15:10:34,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:11:04] 2025-12-13 15:10:34,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:11:04] 2025-12-13 15:10:34,896 | INFO     | aborting loop
[2025-12-13 10:11:04] 2025-12-13 15:10:34,928 | INFO     | all data control threads have been joined
[2025-12-13 10:11:04] 2025-12-13 15:10:35,510 | INFO     | [job] retrieve thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:35,511 | INFO     | [job] queue monitor thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:35,630 | INFO     | all payload control threads have been joined
[2025-12-13 10:11:04] 2025-12-13 15:10:35,901 | INFO     | [job] job monitor thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:35,931 | INFO     | [data] control thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:35,961 | INFO     | [payload] failed_post thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,032 | INFO     | all job control threads have been joined
[2025-12-13 10:11:04] 2025-12-13 15:10:36,127 | INFO     | [job] validate thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,194 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,225 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,511 | INFO     | [data] copytool_out thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,636 | INFO     | [payload] control thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,762 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:36,784 | INFO     | [data] copytool_in thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:37,008 | INFO     | [payload] validate_post thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:37,038 | INFO     | [job] control thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:37,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 10:11:04] 2025-12-13 15:10:41,368 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:44,921 | INFO     | job.realtimelogging is not enabled
[2025-12-13 10:11:04] 2025-12-13 15:10:45,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 10:11:04] 2025-12-13 15:10:48,461 | INFO     | [monitor] cgroup control has ended
[2025-12-13 10:11:04] 2025-12-13 15:10:49,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910939776832)>', '<ExcThread(monitor, started 139910321248000)>']
[2025-12-13 10:11:04] 2025-12-13 15:10:54,803 | INFO     | all workflow threads have been joined
[2025-12-13 10:11:04] 2025-12-13 15:10:54,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 10:11:04] 2025-12-13 15:10:54,803 | INFO     | traces error code: 0
[2025-12-13 10:11:04] 2025-12-13 15:10:54,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 10:11:04] 2025-12-13 15:11:04,047 | INFO     | PID=28470 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 10:11:04] 2025-12-13 15:11:04,048 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 10:11:04] 2025-12-13 15:11:04,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 10:11:04] 2025-12-13 15:11:04,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 10:11:04] 2025-12-13 15:11:04,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 10:11:04] 2025-12-13 15:11:04,048 | INFO     | [monitor] control thread has ended
[2025-12-13 10:11:04] 2025-12-13 15:11:04,147 [wrapper] ==== pilot stdout END ====
[2025-12-13 10:11:04] 2025-12-13 15:11:04,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 10:11:04] 2025-12-13 15:11:04,154 [wrapper] pilotpid: 28470
[2025-12-13 10:11:04] 2025-12-13 15:11:04,157 [wrapper] Pilot exit status: 0
[2025-12-13 10:11:04] 2025-12-13 15:11:04,172 [wrapper] pandaids: 6929276331
[2025-12-13 10:11:04] 2025-12-13 15:11:04,214 [wrapper] cleanup supervisor_pilot  2033 28471
[2025-12-13 10:11:04] 2025-12-13 15:11:04,217 [wrapper] Test setup, not cleaning
[2025-12-13 10:11:04] 2025-12-13 15:11:04,221 [wrapper] apfmon messages muted
[2025-12-13 10:11:04] 2025-12-13 15:11:04,224 [wrapper] ==== wrapper stdout END ====
[2025-12-13 10:11:04] 2025-12-13 15:11:04,228 [wrapper] ==== wrapper stderr END ====
[2025-12-13 10:11:04]  *** Error codes and diagnostics ***
[2025-12-13 10:11:04]     "exeErrorCode": 0,
[2025-12-13 10:11:04]     "exeErrorDiag": "",
[2025-12-13 10:11:04]     "pilotErrorCode": 0,
[2025-12-13 10:11:04]     "pilotErrorDiag": "",
[2025-12-13 10:11:04]  *** Listing of results directory ***
[2025-12-13 10:11:04] total 409756
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 10:11:04] -rwx------ 1 boincer umatlas     36322 Dec 13 05:03 runpilot2-wrapper.sh
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:05 queuedata.json
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas       100 Dec 13 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 10:11:04] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 08:30 run_atlas
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas       105 Dec 13 08:30 job.xml
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas 214513893 Dec 13 08:30 EVNT.47898833._000045.pool.root.1
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:30 start_atlas.sh
[2025-12-13 10:11:04] drwxrwx--x 2 boincer umatlas      4096 Dec 13 08:30 shared
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 08:30 input.tar.gz
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas         0 Dec 13 08:30 boinc_lockfile
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas      2546 Dec 13 08:30 pandaJob.out
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas        57 Dec 13 08:30 setup.sh.local
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas    991736 Dec 13 08:30 agis_schedconf.cvmfs.json
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas   1516240 Dec 13 08:30 agis_ddmendpoints.agis.ALL.json
[2025-12-13 10:11:04] drwx------ 5 boincer umatlas      4096 Dec 13 08:30 pilot3
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 10:04 init_data.xml
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas 198681354 Dec 13 10:09 HITS.47898836._001101.pool.root.1
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas       529 Dec 13 10:10 boinc_task_state.xml
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas      1045 Dec 13 10:10 memory_monitor_summary.json
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas    389347 Dec 13 10:10 log.47898836._001101.job.log.tgz.1
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas      7846 Dec 13 10:10 heartbeat.json
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas        27 Dec 13 10:10 wrapper_checkpoint.txt
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 10:10 boinc_mmap_file
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas        95 Dec 13 10:11 pilot_heartbeat.json
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas       745 Dec 13 10:11 pilotlog.txt
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas    850331 Dec 13 10:11 log.47898836._001101.job.log.1
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas       357 Dec 13 10:11 output.list
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas       620 Dec 13 10:11 runtime_log
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas   1259520 Dec 13 10:11 result.tar.gz
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas      9344 Dec 13 10:11 runtime_log.err
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas       659 Dec 13 10:11 llCNDmmebo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsxSKDm0a8snn.diag
[2025-12-13 10:11:04] -rw-r--r-- 1 boincer umatlas     21729 Dec 13 10:11 stderr.txt
[2025-12-13 10:11:04] HITS file was successfully produced:
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas 198681354 Dec 13 10:09 shared/HITS.pool.root.1
[2025-12-13 10:11:04]  *** Contents of shared directory: ***
[2025-12-13 10:11:04] total 405344
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas 214513893 Dec 13 08:30 ATLAS.root_0
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:30 start_atlas.sh
[2025-12-13 10:11:04] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 08:30 input.tar.gz
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas 198681354 Dec 13 10:09 HITS.pool.root.1
[2025-12-13 10:11:04] -rw------- 1 boincer umatlas   1259520 Dec 13 10:11 result.tar.gz
10:11:06 (24771): run_atlas exited; CPU time 66310.666047
10:11:06 (24771): called boinc_finish(0)

</stderr_txt>
]]>

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