Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:34 (24016): wrapper (7.7.26015): starting
08:20:34 (24016): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 08:20:34] Arguments: --nthreads 8
[2025-12-13 08:20:34] Threads: 8
[2025-12-13 08:20:34] Checking for CVMFS
[2025-12-13 08:20:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 08:20:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 08:20:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 08:20:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 08:20:34] 2.11.2.0 26356 132113 138312 153962 2 57 9893189 18432001 1833 130560 0 96372645 99.976 5553347 23488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 08:20:34] CVMFS is ok
[2025-12-13 08:20:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 08:20:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 08:20:34] Further information can be found at the LHC@home message board.
[2025-12-13 08:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 08:20:34] Checking for apptainer binary...
[2025-12-13 08:20:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 08:20:34] Running /usr/bin/apptainer --version
[2025-12-13 08:20:34] apptainer version 1.3.2-1.el7
[2025-12-13 08:20:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 08:20:35] c-206-6.aglt2.org
[2025-12-13 08:20:35] apptainer works
[2025-12-13 08:20:35] Set ATHENA_PROC_NUMBER=8
[2025-12-13 08:20:35] Set ATHENA_CORE_NUMBER=8
[2025-12-13 08:20:35] Starting ATLAS job with PandaID=6929276387
[2025-12-13 08:20:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 12:31:19]  *** The last 200 lines of the pilot log: ***
[2025-12-13 12:31:19] 2025-12-13 17:30:46,075 | INFO     | time since job start (15000s) is within the limit (174528.0s)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,723 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 12:31:19] 2025-12-13 17:30:46,727 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2416.9166666666665
[2025-12-13 12:31:19] 2025-12-13 17:30:46,729 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929276387/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,730 | INFO     | extracted standard info from prmon json
[2025-12-13 12:31:19] 2025-12-13 17:30:46,730 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 12:31:19] 2025-12-13 17:30:46,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 12:31:19] 2025-12-13 17:30:46,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 12:31:19] 2025-12-13 17:30:46,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 12:31:19] 2025-12-13 17:30:46,734 | INFO     | fitting pss+swap vs Time
[2025-12-13 12:31:19] 2025-12-13 17:30:46,735 | INFO     | sum of square deviations: 4616114457.5
[2025-12-13 12:31:19] 2025-12-13 17:30:46,736 | INFO     | sum of deviations: -38409731042.000015
[2025-12-13 12:31:19] 2025-12-13 17:30:46,736 | INFO     | mean x: 1765639543.5
[2025-12-13 12:31:19] 2025-12-13 17:30:46,736 | INFO     | mean y: 2515016.9430894307
[2025-12-13 12:31:19] 2025-12-13 17:30:46,736 | INFO     | intersect: 14694035473.670126
[2025-12-13 12:31:19] 2025-12-13 17:30:46,737 | INFO     | chi2: 2.4293132014859617
[2025-12-13 12:31:19] 2025-12-13 17:30:46,737 | INFO     | sum of square deviations: 4340323240.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,738 | INFO     | sum of deviations: -21041118264.999977
[2025-12-13 12:31:19] 2025-12-13 17:30:46,739 | INFO     | mean x: 1765639391.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,739 | INFO     | mean y: 2524473.1659751036
[2025-12-13 12:31:19] 2025-12-13 17:30:46,739 | INFO     | intersect: 8562031492.595601
[2025-12-13 12:31:19] 2025-12-13 17:30:46,739 | INFO     | chi2: 1.6602908880449154
[2025-12-13 12:31:19] 2025-12-13 17:30:46,739 | INFO     | current chi2=1.6602908880449154 (change=31.655955805560637 %)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,740 | INFO     | sum of square deviations: 4075741535.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,741 | INFO     | sum of deviations: -20189428822.999992
[2025-12-13 12:31:19] 2025-12-13 17:30:46,741 | INFO     | mean x: 1765639238.5
[2025-12-13 12:31:19] 2025-12-13 17:30:46,741 | INFO     | mean y: 2524964.13559322
[2025-12-13 12:31:19] 2025-12-13 17:30:46,741 | INFO     | intersect: 8748724257.362282
[2025-12-13 12:31:19] 2025-12-13 17:30:46,742 | INFO     | chi2: 1.659567767214695
[2025-12-13 12:31:19] 2025-12-13 17:30:46,742 | INFO     | current chi2=1.659567767214695 (change=0.04355386368903342 %)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,742 | INFO     | right removable region: 235
[2025-12-13 12:31:19] 2025-12-13 17:30:46,742 | INFO     | sum of square deviations: 4340323240.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,743 | INFO     | sum of deviations: -73937212511.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,743 | INFO     | mean x: 1765639696.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,744 | INFO     | mean y: 2534472.4356846474
[2025-12-13 12:31:19] 2025-12-13 17:30:46,744 | INFO     | intersect: 30080127822.605022
[2025-12-13 12:31:19] 2025-12-13 17:30:46,744 | INFO     | chi2: 1.0572430684988203
[2025-12-13 12:31:19] 2025-12-13 17:30:46,744 | INFO     | current chi2=1.0572430684988203 (change=56.47975453094619 %)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,744 | INFO     | sum of square deviations: 4075741535.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | sum of deviations: -78579004613.5
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | mean x: 1765639848.5
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | mean y: 2537147.7076271186
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | intersect: 34043513644.77614
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | chi2: 1.015297098590837
[2025-12-13 12:31:19] 2025-12-13 17:30:46,746 | INFO     | current chi2=1.015297098590837 (change=3.967485922375682 %)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,747 | INFO     | left removable region: 20
[2025-12-13 12:31:19] 2025-12-13 17:30:46,747 | INFO     | sum of square deviations: 3081657780.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,748 | INFO     | sum of deviations: -49850484843.00001
[2025-12-13 12:31:19] 2025-12-13 17:30:46,748 | INFO     | mean x: 1765639818.0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,748 | INFO     | mean y: 2542341.1395348837
[2025-12-13 12:31:19] 2025-12-13 17:30:46,748 | INFO     | intersect: 28564442223.93778
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | chi2: 0.20710607260325573
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | current memory leak: -16.18 B/s (using 215 data points, chi2=0.21)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | could have reported an average CPU frequency of 2571 MHz (12 samples)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | ..............................
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | . Timing measurements:
[2025-12-13 12:31:19] 2025-12-13 17:30:46,749 | INFO     | . get job = 0 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . initial setup = 2 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . payload setup = 5 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . stage-in = 0 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . payload execution = 14965 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . stage-out = 1 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | . log creation = 0 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,750 | INFO     | ..............................
[2025-12-13 12:31:19] 2025-12-13 17:30:46,888 | INFO     | 
[2025-12-13 12:31:19] 2025-12-13 17:30:46,888 | INFO     | job summary report
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | --------------------------------------------------
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | PanDA job id: 6929276387
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | task id: 47898836
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | errors: (none)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 12:31:19] 2025-12-13 17:30:46,889 | INFO     | pilot state: finished 
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | transexitcode: 0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | exeerrorcode: 0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | exeerrordiag: 
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | exitcode: 0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | exitmsg: OK
[2025-12-13 12:31:19] 2025-12-13 17:30:46,890 | INFO     | cpuconsumptiontime: 112684 s
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | nevents: 400
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | neventsw: 0
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | pid: 1810
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | pgrp: 1810
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | corecount: 8
[2025-12-13 12:31:19] 2025-12-13 17:30:46,891 | INFO     | event service: False
[2025-12-13 12:31:19] 2025-12-13 17:30:46,892 | INFO     | sizes: {0: 2283177, 1: 2284033, 5: 2284295, 12: 2284351, 14974: 2315223, 14977: 2324221, 14980: 2324405, 14986: 2324599}
[2025-12-13 12:31:19] 2025-12-13 17:30:46,892 | INFO     | --------------------------------------------------
[2025-12-13 12:31:19] 2025-12-13 17:30:46,892 | INFO     | 
[2025-12-13 12:31:19] 2025-12-13 17:30:46,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 12:31:19] 2025-12-13 17:30:46,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 12:31:19] 2025-12-13 17:30:46,916 | INFO     | job 6929276387 has completed (purged errors)
[2025-12-13 12:31:19] 2025-12-13 17:30:46,916 | INFO     | overall cleanup function is called
[2025-12-13 12:31:19] 2025-12-13 17:30:47,924 | INFO     | --- collectZombieJob: --- 10, [1810]
[2025-12-13 12:31:19] 2025-12-13 17:30:47,925 | INFO     | zombie collector waiting for pid 1810
[2025-12-13 12:31:19] 2025-12-13 17:30:47,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 12:31:19] 2025-12-13 17:30:47,925 | INFO     | collected zombie processes
[2025-12-13 12:31:19] 2025-12-13 17:30:47,925 | INFO     | will attempt to kill all subprocesses of pid=1810
[2025-12-13 12:31:19] 2025-12-13 17:30:48,097 | INFO     | process IDs to be killed: [1810] (in reverse order)
[2025-12-13 12:31:19] 2025-12-13 17:30:48,141 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 12:31:19] 2025-12-13 17:30:48,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 12:31:19] 2025-12-13 17:30:48,144 | INFO     | did not find any defunct processes belonging to 1810
[2025-12-13 12:31:19] 2025-12-13 17:30:48,146 | INFO     | did not find any defunct processes belonging to 1810
[2025-12-13 12:31:19] 2025-12-13 17:30:48,147 | INFO     | ready for new job
[2025-12-13 12:31:19] 2025-12-13 17:30:48,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 12:31:19] 2025-12-13 17:30:48,148 | INFO     | ***************************************
[2025-12-13 12:31:19] 2025-12-13 17:30:48,148 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 12:31:19] 2025-12-13 17:30:48,148 | INFO     | ***************************************
[2025-12-13 12:31:19] 2025-12-13 17:30:48,149 | INFO     | 
[2025-12-13 12:31:19] 2025-12-13 17:30:48,149 | INFO     | architecture information:
[2025-12-13 12:31:19] 2025-12-13 17:30:48,150 | INFO     | executing command: cat /etc/os-release
[2025-12-13 12:31:19] 2025-12-13 17:30:48,160 | INFO     | cat /etc/os-release:
[2025-12-13 12:31:19] NAME="CentOS Linux"
[2025-12-13 12:31:19] VERSION="7 (Core)"
[2025-12-13 12:31:19] ID="centos"
[2025-12-13 12:31:19] ID_LIKE="rhel fedora"
[2025-12-13 12:31:19] VERSION_ID="7"
[2025-12-13 12:31:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 12:31:19] ANSI_COLOR="0;31"
[2025-12-13 12:31:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 12:31:19] HOME_URL="https://www.centos.org/"
[2025-12-13 12:31:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 12:31:19] 
[2025-12-13 12:31:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 12:31:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 12:31:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 12:31:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 12:31:19] 
[2025-12-13 12:31:19] 2025-12-13 17:30:48,160 | INFO     | ***************************************
[2025-12-13 12:31:19] 2025-12-13 17:30:48,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 12:31:19] 2025-12-13 17:30:48,680 | INFO     | sufficient remaining disk space (28109176832 B)
[2025-12-13 12:31:19] 2025-12-13 17:30:48,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 12:31:19] 2025-12-13 17:30:48,681 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 12:31:19] 2025-12-13 17:30:48,681 | INFO     | update_server=False
[2025-12-13 12:31:19] 2025-12-13 17:30:48,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 12:31:19] 2025-12-13 17:30:48,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:31:19] 2025-12-13 17:30:48,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 12:31:19] 2025-12-13 17:30:49,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:31:19] 2025-12-13 17:30:49,124 | INFO     | aborting loop
[2025-12-13 12:31:19] 2025-12-13 17:30:49,246 | INFO     | all job control threads have been joined
[2025-12-13 12:31:19] 2025-12-13 17:30:49,280 | INFO     | all payload control threads have been joined
[2025-12-13 12:31:19] 2025-12-13 17:30:49,634 | INFO     | all data control threads have been joined
[2025-12-13 12:31:19] 2025-12-13 17:30:49,688 | INFO     | [job] queue monitor thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:49,689 | INFO     | [job] retrieve thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,001 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,129 | INFO     | [job] job monitor thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,251 | INFO     | [job] control thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,285 | INFO     | [payload] control thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,468 | INFO     | [payload] validate_post thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,592 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,640 | INFO     | [data] control thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,688 | INFO     | [data] copytool_out thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,919 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:50,933 | INFO     | [data] copytool_in thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:51,008 | INFO     | [payload] failed_post thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:51,117 | INFO     | [job] validate thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:51,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 12:31:19] 2025-12-13 17:30:55,570 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:30:59,054 | INFO     | job.realtimelogging is not enabled
[2025-12-13 12:31:19] 2025-12-13 17:31:00,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 12:31:19] 2025-12-13 17:31:10,285 | INFO     | [monitor] cgroup control has ended
[2025-12-13 12:31:19] 2025-12-13 17:31:10,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513699415872)>', '<ExcThread(monitor, started 140513109849856)>']
[2025-12-13 12:31:19] 2025-12-13 17:31:15,348 | INFO     | all workflow threads have been joined
[2025-12-13 12:31:19] 2025-12-13 17:31:15,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 12:31:19] 2025-12-13 17:31:15,348 | INFO     | traces error code: 0
[2025-12-13 12:31:19] 2025-12-13 17:31:15,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 12:31:19] 2025-12-13 17:31:19,274 | INFO     | PID=27705 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 12:31:19] 2025-12-13 17:31:19,274 | INFO     | .. there are 3 such processes running
[2025-12-13 12:31:19] 2025-12-13 17:31:19,275 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 12:31:19] 2025-12-13 17:31:19,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 12:31:19] 2025-12-13 17:31:19,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 12:31:19] 2025-12-13 17:31:19,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 12:31:19] 2025-12-13 17:31:19,275 | INFO     | [monitor] control thread has ended
[2025-12-13 12:31:19] 2025-12-13 17:31:19,379 [wrapper] ==== pilot stdout END ====
[2025-12-13 12:31:19] 2025-12-13 17:31:19,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 12:31:19] 2025-12-13 17:31:19,385 [wrapper] pilotpid: 27705
[2025-12-13 12:31:19] 2025-12-13 17:31:19,387 [wrapper] Pilot exit status: 0
[2025-12-13 12:31:19] 2025-12-13 17:31:19,396 [wrapper] pandaids: 6929276387
[2025-12-13 12:31:19] 2025-12-13 17:31:19,424 [wrapper] cleanup supervisor_pilot 30297 27706
[2025-12-13 12:31:19] 2025-12-13 17:31:19,426 [wrapper] Test setup, not cleaning
[2025-12-13 12:31:19] 2025-12-13 17:31:19,428 [wrapper] apfmon messages muted
[2025-12-13 12:31:19] 2025-12-13 17:31:19,431 [wrapper] ==== wrapper stdout END ====
[2025-12-13 12:31:19] 2025-12-13 17:31:19,433 [wrapper] ==== wrapper stderr END ====
[2025-12-13 12:31:19]  *** Error codes and diagnostics ***
[2025-12-13 12:31:19]     "exeErrorCode": 0,
[2025-12-13 12:31:19]     "exeErrorDiag": "",
[2025-12-13 12:31:19]     "pilotErrorCode": 0,
[2025-12-13 12:31:19]     "pilotErrorDiag": "",
[2025-12-13 12:31:19]  *** Listing of results directory ***
[2025-12-13 12:31:19] total 412892
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 12:31:19] -rwx------ 1 boincer umatlas     36322 Dec 13 05:03 runpilot2-wrapper.sh
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:05 queuedata.json
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas       100 Dec 13 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 12:31:19] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 08:20 run_atlas
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas       105 Dec 13 08:20 job.xml
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas 212065015 Dec 13 08:20 EVNT.47898833._000047.pool.root.1
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:20 start_atlas.sh
[2025-12-13 12:31:19] drwxrwx--x 2 boincer umatlas      4096 Dec 13 08:20 shared
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas    592399 Dec 13 08:20 input.tar.gz
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas         0 Dec 13 08:20 boinc_lockfile
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas      2548 Dec 13 08:20 pandaJob.out
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas        57 Dec 13 08:20 setup.sh.local
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas    991736 Dec 13 08:20 agis_schedconf.cvmfs.json
[2025-12-13 12:31:19] drwx------ 5 boincer umatlas      4096 Dec 13 08:20 pilot3
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 12:29 init_data.xml
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas 201714993 Dec 13 12:30 HITS.47898836._001157.pool.root.1
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas       531 Dec 13 12:30 boinc_task_state.xml
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas      1053 Dec 13 12:30 memory_monitor_summary.json
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas   1516240 Dec 13 12:30 agis_ddmendpoints.agis.ALL.json
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas    465090 Dec 13 12:30 log.47898836._001157.job.log.tgz.1
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas      7858 Dec 13 12:30 heartbeat.json
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas        29 Dec 13 12:30 wrapper_checkpoint.txt
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 12:30 boinc_mmap_file
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas        95 Dec 13 12:31 pilot_heartbeat.json
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas       820 Dec 13 12:31 pilotlog.txt
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas   2086004 Dec 13 12:31 log.47898836._001157.job.log.1
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas       357 Dec 13 12:31 output.list
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas       620 Dec 13 12:31 runtime_log
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas   2570240 Dec 13 12:31 result.tar.gz
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 12:31 runtime_log.err
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas       662 Dec 13 12:31 FI4MDmnebo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDqOKDmSdS2tm.diag
[2025-12-13 12:31:19] -rw-r--r-- 1 boincer umatlas     21044 Dec 13 12:31 stderr.txt
[2025-12-13 12:31:19] HITS file was successfully produced:
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas 201714993 Dec 13 12:30 shared/HITS.pool.root.1
[2025-12-13 12:31:19]  *** Contents of shared directory: ***
[2025-12-13 12:31:19] total 407200
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas 212065015 Dec 13 08:20 ATLAS.root_0
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:20 start_atlas.sh
[2025-12-13 12:31:19] -rw-r--r-- 2 boincer umatlas    592399 Dec 13 08:20 input.tar.gz
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas 201714993 Dec 13 12:30 HITS.pool.root.1
[2025-12-13 12:31:19] -rw------- 1 boincer umatlas   2570240 Dec 13 12:31 result.tar.gz
12:31:20 (24016): run_atlas exited; CPU time 112851.543526
12:31:20 (24016): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN