Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:04 (2064081): wrapper (7.7.26015): starting
05:43:04 (2064081): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 05:43:04] Arguments: --nthreads 12
[2025-12-13 05:43:04] Threads: 12
[2025-12-13 05:43:04] Checking for CVMFS
[2025-12-13 05:43:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 05:43:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 05:43:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 05:43:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 05:43:07] 2.11.5.0 2445133 52808 378264 153962 3 376 28657135 45568001 11315 130560 0 431727274 99.785 261583997 26103 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 05:43:07] CVMFS is ok
[2025-12-13 05:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 05:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 05:43:07] Further information can be found at the LHC@home message board.
[2025-12-13 05:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 05:43:07] Checking for apptainer binary...
[2025-12-13 05:43:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 05:43:07] Running /usr/bin/apptainer --version
[2025-12-13 05:43:07] apptainer version 1.4.1-1.el9
[2025-12-13 05:43:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 05:43:08] wns0048.triumf.lcg
[2025-12-13 05:43:08] apptainer works
[2025-12-13 05:43:08] Set ATHENA_PROC_NUMBER=12
[2025-12-13 05:43:08] Set ATHENA_CORE_NUMBER=12
[2025-12-13 05:43:08] Starting ATLAS job with PandaID=6929275811
[2025-12-13 05:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 05:49:04]  *** The last 200 lines of the pilot log: ***
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 05:49:04] 2025-12-13 13:48:04,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | WARNING  | wrong length of table data, x=[1765633523.0], y=[1124.0] (must be same and length>=4)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . Timing measurements:
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . get job = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . initial setup = 3 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload setup = 21 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-in = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload execution = 37 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-out = 1 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | . log creation = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929275811/pilotlog.txt
[2025-12-13 05:49:04] 2025-12-13 13:48:04,705 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 05:49:04] - Log from pilotlog.txt -
[2025-12-13 05:49:04] 2025-12-13 13:48:04,611 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929275811/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | INFO     | extracted standard info from prmon json
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 05:49:04] 2025-12-13 13:48:04,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | WARNING  | wrong length of table data, x=[1765633523.0], y=[1124.0] (must be same and length>=4)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . Timing measurements:
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . get job = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . initial setup = 3 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload setup = 21 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-in = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload execution = 37 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-out = 1 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | . log creation = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929275811/pilotlog.txt
[2025-12-13 05:49:04] 2025-12-13 13:48:04,706 | WARNING  | 
[2025-12-13 05:49:04] [begin log extracts]
[2025-12-13 05:49:04] - Log from pilotlog.txt -
[2025-12-13 05:49:04] 2025-12-13 13:48:04,611 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929275811/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | INFO     | extracted standard info from prmon json
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 05:49:04] 2025-12-13 13:48:04,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 05:49:04] 2025-12-13 13:48:04,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | WARNING  | wrong length of table data, x=[1765633523.0], y=[1124.0] (must be same and length>=4)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | could have reported an average CPU frequency of 2517 MHz (4 samples)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . Timing measurements:
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . get job = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . initial setup = 3 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload setup = 21 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-in = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . payload execution = 37 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,633 | INFO     | . stage-out = 1 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | . log creation = 0 s
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | ..............................
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:49:04] 2025-12-13 13:48:04,634 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929275811/pilotlog.txt
[2025-12-13 05:49:04] [end log extracts]
[2025-12-13 05:49:04] 2025-12-13 13:48:04,706 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 05:49:04] 2025-12-13 13:48:04,707 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 05:49:04] 2025-12-13 13:48:05,160 | INFO     | 
[2025-12-13 05:49:04] 2025-12-13 13:48:05,160 | INFO     | job summary report
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | --------------------------------------------------
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | PanDA job id: 6929275811
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | task id: 47898836
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 05:45:36,106 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | pilot state: failed 
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | transexitcode: 65
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | exeerrorcode: 65
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | exitcode: 65
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | nevents: 0
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | neventsw: 0
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | pid: 2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | pgrp: 2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | corecount: 12
[2025-12-13 05:49:04] 2025-12-13 13:48:05,161 | INFO     | event service: False
[2025-12-13 05:49:04] 2025-12-13 13:48:05,162 | INFO     | sizes: {0: 2283772, 1: 2283856, 2: 2284055, 3: 2284055, 14: 2284083, 18: 2284373, 25: 2284529, 62: 2307825, 64: 2312173, 201: 2312311}
[2025-12-13 05:49:04] 2025-12-13 13:48:05,162 | INFO     | --------------------------------------------------
[2025-12-13 05:49:04] 2025-12-13 13:48:05,162 | INFO     | 
[2025-12-13 05:49:04] 2025-12-13 13:48:05,162 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 05:49:04] 2025-12-13 13:48:05,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 05:49:04] 2025-12-13 13:48:05,213 | INFO     | job 6929275811 has completed (purged errors)
[2025-12-13 05:49:04] 2025-12-13 13:48:05,213 | INFO     | overall cleanup function is called
[2025-12-13 05:49:04] 2025-12-13 13:48:06,219 | INFO     | --- collectZombieJob: --- 10, [2078003]
[2025-12-13 05:49:04] 2025-12-13 13:48:06,219 | INFO     | zombie collector waiting for pid 2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:06,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 05:49:04] 2025-12-13 13:48:06,220 | INFO     | collected zombie processes
[2025-12-13 05:49:04] 2025-12-13 13:48:06,220 | INFO     | will attempt to kill all subprocesses of pid=2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:06,877 | INFO     | process IDs to be killed: [2078003] (in reverse order)
[2025-12-13 05:49:04] 2025-12-13 13:48:07,354 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 05:49:04] 2025-12-13 13:48:07,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 05:49:04] 2025-12-13 13:48:07,404 | INFO     | did not find any defunct processes belonging to 2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:07,444 | INFO     | did not find any defunct processes belonging to 2078003
[2025-12-13 05:49:04] 2025-12-13 13:48:07,445 | INFO     | ready for new job
[2025-12-13 05:49:04] 2025-12-13 13:48:07,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 05:49:04] 2025-12-13 13:48:07,446 | INFO     | ***************************************
[2025-12-13 05:49:04] 2025-12-13 13:48:07,446 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 05:49:04] 2025-12-13 13:48:07,446 | INFO     | ***************************************
[2025-12-13 05:49:04] 2025-12-13 13:48:07,446 | INFO     | 
[2025-12-13 05:49:04] 2025-12-13 13:48:07,448 | INFO     | architecture information:
[2025-12-13 05:49:04] 2025-12-13 13:48:07,468 | INFO     | executing command: cat /etc/os-release
[2025-12-13 05:49:04] 2025-12-13 13:48:07,589 | INFO     | cat /etc/os-release:
[2025-12-13 05:49:04] NAME="CentOS Linux"
[2025-12-13 05:49:04] VERSION="7 (Core)"
[2025-12-13 05:49:04] ID="centos"
[2025-12-13 05:49:04] ID_LIKE="rhel fedora"
[2025-12-13 05:49:04] VERSION_ID="7"
[2025-12-13 05:49:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 05:49:04] ANSI_COLOR="0;31"
[2025-12-13 05:49:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 05:49:04] HOME_URL="https://www.centos.org/"
[2025-12-13 05:49:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 05:49:04] 
[2025-12-13 05:49:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 05:49:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 05:49:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 05:49:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 05:49:04] 
[2025-12-13 05:49:04] 2025-12-13 13:48:07,590 | INFO     | ***************************************
[2025-12-13 05:49:04] 2025-12-13 13:48:08,093 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 05:49:04] 2025-12-13 13:48:08,158 | INFO     | sufficient remaining disk space (2196136525824 B)
[2025-12-13 05:49:04] 2025-12-13 13:48:08,158 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 05:49:04] 2025-12-13 13:48:08,158 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 05:49:04] 2025-12-13 13:48:08,158 | INFO     | update_server=False
[2025-12-13 05:49:04] 2025-12-13 13:48:08,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 05:49:04] 2025-12-13 13:48:08,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 05:49:04] 2025-12-13 13:48:08,159 | INFO     | aborting loop
[2025-12-13 05:49:04] 2025-12-13 13:48:08,677 | INFO     | all payload control threads have been joined
[2025-12-13 05:49:04] 2025-12-13 13:48:09,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 05:49:04] 2025-12-13 13:48:09,081 | INFO     | all job control threads have been joined
[2025-12-13 05:49:04] 2025-12-13 13:48:09,164 | INFO     | [job] retrieve thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,165 | INFO     | [job] job monitor thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,261 | INFO     | all data control threads have been joined
[2025-12-13 05:49:04] 2025-12-13 13:48:09,371 | INFO     | [data] copytool_in thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,411 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,654 | INFO     | [payload] validate_post thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 05:49:04] 2025-12-13 13:48:09,686 | INFO     | [payload] control thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,796 | INFO     | [job] validate thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:09,996 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:10,087 | INFO     | [job] control thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:10,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 05:49:04] 2025-12-13 13:48:10,267 | INFO     | [data] control thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:10,658 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:10,767 | INFO     | [payload] failed_post thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:11,017 | INFO     | [data] copytool_out thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:11,182 | INFO     | [job] queue monitor thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:13,691 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 05:49:04] 2025-12-13 13:48:38,467 | INFO     | PID=2071081 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 05:49:04] 2025-12-13 13:48:38,467 | INFO     | .. there are 42 such processes running
[2025-12-13 05:49:04] 2025-12-13 13:48:38,467 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 05:49:04] 2025-12-13 13:48:38,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 05:49:04] 2025-12-13 13:48:38,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 05:49:04] 2025-12-13 13:48:57,222 | INFO     | [monitor] cgroup control has ended
[2025-12-13 05:49:04] 2025-12-13 13:48:57,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355244435264)>', '<ExcThread(monitor, started 140354915370752)>']
[2025-12-13 05:49:04] 2025-12-13 13:48:58,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 05:49:04] 2025-12-13 13:48:58,590 | INFO     | [monitor] control thread has ended
[2025-12-13 05:49:04] 2025-12-13 13:49:03,003 | INFO     | all workflow threads have been joined
[2025-12-13 05:49:04] 2025-12-13 13:49:03,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 05:49:04] 2025-12-13 13:49:03,004 | INFO     | traces error code: 0
[2025-12-13 05:49:04] 2025-12-13 13:49:03,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 05:49:04] 2025-12-13 13:49:03,300 [wrapper] ==== pilot stdout END ====
[2025-12-13 05:49:04] 2025-12-13 13:49:03,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 05:49:04] 2025-12-13 13:49:03,366 [wrapper] pilotpid: 2071081
[2025-12-13 05:49:04] 2025-12-13 13:49:03,377 [wrapper] Pilot exit status: 0
[2025-12-13 05:49:04] 2025-12-13 13:49:03,469 [wrapper] pandaids: 6929275811
[2025-12-13 05:49:04] 2025-12-13 13:49:03,579 [wrapper] cleanup supervisor_pilot 2071089 2071082
[2025-12-13 05:49:04] 2025-12-13 13:49:03,581 [wrapper] Test setup, not cleaning
[2025-12-13 05:49:04] 2025-12-13 13:49:03,584 [wrapper] apfmon messages muted
[2025-12-13 05:49:04] 2025-12-13 13:49:03,587 [wrapper] ==== wrapper stdout END ====
[2025-12-13 05:49:04] 2025-12-13 13:49:03,589 [wrapper] ==== wrapper stderr END ====
[2025-12-13 05:49:04]  *** Error codes and diagnostics ***
[2025-12-13 05:49:04]     "exeErrorCode": 65,
[2025-12-13 05:49:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 05:49:04]     "pilotErrorCode": 1305,
[2025-12-13 05:49:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 05:49:04]  *** Listing of results directory ***
[2025-12-13 05:49:04] total 210576
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc    579449 Dec 13 02:01 pilot3.tar.gz
[2025-12-13 05:49:04] -rwx------. 1 boinc boinc     36322 Dec 13 02:03 runpilot2-wrapper.sh
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc      5112 Dec 13 02:05 queuedata.json
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc       100 Dec 13 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 05:49:04] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 05:43 run_atlas
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc       105 Dec 13 05:43 job.xml
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc      6596 Dec 13 05:43 init_data.xml
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc 211487290 Dec 13 05:43 EVNT.47898833._000039.pool.root.1
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc     15847 Dec 13 05:43 start_atlas.sh
[2025-12-13 05:49:04] drwxrwx--x. 2 boinc boinc      4096 Dec 13 05:43 shared
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc    592400 Dec 13 05:43 input.tar.gz
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc         0 Dec 13 05:43 boinc_lockfile
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc      2547 Dec 13 05:43 pandaJob.out
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc    991736 Dec 13 05:43 agis_schedconf.cvmfs.json
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc   1516240 Dec 13 05:43 agis_ddmendpoints.agis.ALL.json
[2025-12-13 05:49:04] drwx------. 5 boinc boinc      4096 Dec 13 05:43 pilot3
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc       968 Dec 13 05:45 memory_monitor_summary.json
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc     22005 Dec 13 05:45 log.47898836._000959.job.log.tgz.1
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc        95 Dec 13 05:47 pilot_heartbeat.json
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc      8394 Dec 13 05:48 heartbeat.json
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc       523 Dec 13 05:48 boinc_task_state.xml
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc      4823 Dec 13 05:49 pilotlog.txt
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc        22 Dec 13 05:49 wrapper_checkpoint.txt
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc     91721 Dec 13 05:49 log.47898836._000959.job.log.1
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc      8192 Dec 13 05:49 boinc_mmap_file
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc       188 Dec 13 05:49 output.list
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc       620 Dec 13 05:49 runtime_log
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc    133120 Dec 13 05:49 result.tar.gz
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc      8636 Dec 13 05:49 runtime_log.err
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc       644 Dec 13 05:49 42jKDmeebo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGpOKDmurhOOo.diag
[2025-12-13 05:49:04] -rw-r--r--. 1 boinc boinc     21817 Dec 13 05:49 stderr.txt
[2025-12-13 05:49:04] No HITS result produced
[2025-12-13 05:49:04]  *** Contents of shared directory: ***
[2025-12-13 05:49:04] total 207260
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc 211487290 Dec 13 05:43 ATLAS.root_0
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc     15847 Dec 13 05:43 start_atlas.sh
[2025-12-13 05:49:04] -rw-r--r--. 2 boinc boinc    592400 Dec 13 05:43 input.tar.gz
[2025-12-13 05:49:04] -rw-------. 1 boinc boinc    133120 Dec 13 05:49 result.tar.gz
05:49:06 (2064081): run_atlas exited; CPU time 27.458488
05:49:06 (2064081): called boinc_finish(0)

</stderr_txt>
]]>

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