Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:06:23 (2700): wrapper (7.7.26015): starting
08:06:23 (2700): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 08:06:23] Arguments: --nthreads 8
[2025-12-13 08:06:23] Threads: 8
[2025-12-13 08:06:23] Checking for CVMFS
[2025-12-13 08:06:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 08:06:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 08:06:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 08:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 08:06:23] 2.11.2.0 2895 97817 95416 153961 0 57 13919598 20275201 1 130560 0 28406640 99.849 6540555 33166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 08:06:23] CVMFS is ok
[2025-12-13 08:06:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 08:06:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 08:06:23] Further information can be found at the LHC@home message board.
[2025-12-13 08:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 08:06:23] Checking for apptainer binary...
[2025-12-13 08:06:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 08:06:23] Running /usr/bin/apptainer --version
[2025-12-13 08:06:23] apptainer version 1.3.2-1.el7
[2025-12-13 08:06:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 08:06:25] c-204-7.aglt2.org
[2025-12-13 08:06:25] apptainer works
[2025-12-13 08:06:25] Set ATHENA_PROC_NUMBER=8
[2025-12-13 08:06:25] Set ATHENA_CORE_NUMBER=8
[2025-12-13 08:06:25] Starting ATLAS job with PandaID=6929218955
[2025-12-13 08:06:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 11:09:07]  *** The last 200 lines of the pilot log: ***
[2025-12-13 11:09:07] 2025-12-13 16:08:01,739 | INFO     | intersect: -30776680006.058067
[2025-12-13 11:09:07] 2025-12-13 16:08:01,740 | INFO     | chi2: 1.3416337127837583
[2025-12-13 11:09:07] 2025-12-13 16:08:01,740 | INFO     | sum of square deviations: 1605470102.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,742 | INFO     | sum of deviations: 29528440861.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,742 | INFO     | mean x: 1765636480.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,742 | INFO     | mean y: 2472306.9942196533
[2025-12-13 11:09:07] 2025-12-13 16:08:01,742 | INFO     | intersect: -32471811902.195126
[2025-12-13 11:09:07] 2025-12-13 16:08:01,743 | INFO     | chi2: 1.3420896219375362
[2025-12-13 11:09:07] 2025-12-13 16:08:01,743 | INFO     | current chi2=1.3420896219375362 (change=-0.0339816411464456 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,743 | INFO     | right removable region: 172
[2025-12-13 11:09:07] 2025-12-13 16:08:01,744 | INFO     | sum of square deviations: 1605470102.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,745 | INFO     | sum of deviations: 5626068795.999999
[2025-12-13 11:09:07] 2025-12-13 16:08:01,745 | INFO     | mean x: 1765636785.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,745 | INFO     | mean y: 2499415.5664739884
[2025-12-13 11:09:07] 2025-12-13 16:08:01,746 | INFO     | intersect: -6184843474.708201
[2025-12-13 11:09:07] 2025-12-13 16:08:01,746 | INFO     | chi2: 0.01190947186920658
[2025-12-13 11:09:07] 2025-12-13 16:08:01,746 | INFO     | current chi2=0.01190947186920658 (change=99.11231569721846 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,747 | INFO     | sum of square deviations: 1470248962.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,748 | INFO     | sum of deviations: 4859183841.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,748 | INFO     | mean x: 1765636937.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,748 | INFO     | mean y: 2500280.648809524
[2025-12-13 11:09:07] 2025-12-13 16:08:01,749 | INFO     | intersect: -5832943034.328716
[2025-12-13 11:09:07] 2025-12-13 16:08:01,749 | INFO     | chi2: 0.001813271108545702
[2025-12-13 11:09:07] 2025-12-13 16:08:01,749 | INFO     | current chi2=0.001813271108545702 (change=84.77454644118905 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,750 | INFO     | sum of square deviations: 1342841922.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,751 | INFO     | sum of deviations: 3579277419.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,751 | INFO     | mean x: 1765637090.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,751 | INFO     | mean y: 2501810.1901840493
[2025-12-13 11:09:07] 2025-12-13 16:08:01,752 | INFO     | intersect: -4703714806.11372
[2025-12-13 11:09:07] 2025-12-13 16:08:01,752 | INFO     | chi2: 0.0007641400982482417
[2025-12-13 11:09:07] 2025-12-13 16:08:01,752 | INFO     | current chi2=0.0007641400982482417 (change=57.85847496014509 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,753 | INFO     | sum of square deviations: 1223016419.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,754 | INFO     | sum of deviations: 2876371460.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,754 | INFO     | mean x: 1765637242.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,754 | INFO     | mean y: 2502702.0569620254
[2025-12-13 11:09:07] 2025-12-13 16:08:01,755 | INFO     | intersect: -4150040545.072287
[2025-12-13 11:09:07] 2025-12-13 16:08:01,755 | INFO     | chi2: 0.0005227849087948165
[2025-12-13 11:09:07] 2025-12-13 16:08:01,755 | INFO     | current chi2=0.0005227849087948165 (change=31.585201458046974 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,756 | INFO     | sum of square deviations: 1110539892.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,757 | INFO     | sum of deviations: 2361337449.9999995
[2025-12-13 11:09:07] 2025-12-13 16:08:01,757 | INFO     | mean x: 1765637395.0
[2025-12-13 11:09:07] 2025-12-13 16:08:01,757 | INFO     | mean y: 2503400.006535948
[2025-12-13 11:09:07] 2025-12-13 16:08:01,758 | INFO     | intersect: -3751765792.8140874
[2025-12-13 11:09:07] 2025-12-13 16:08:01,758 | INFO     | chi2: 0.000423261235053847
[2025-12-13 11:09:07] 2025-12-13 16:08:01,758 | INFO     | current chi2=0.000423261235053847 (change=19.03721244945705 %)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,758 | INFO     | left removable region: 50
[2025-12-13 11:09:07] 2025-12-13 16:08:01,759 | INFO     | sum of square deviations: 563026370.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,760 | INFO     | sum of deviations: 646212802.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,760 | INFO     | mean x: 1765637974.5
[2025-12-13 11:09:07] 2025-12-13 16:08:01,760 | INFO     | mean y: 2505983.9426229508
[2025-12-13 11:09:07] 2025-12-13 16:08:01,760 | INFO     | intersect: -2024002761.4449406
[2025-12-13 11:09:07] 2025-12-13 16:08:01,760 | INFO     | chi2: 0.0001127234511188753
[2025-12-13 11:09:07] 2025-12-13 16:08:01,761 | INFO     | current memory leak: 1.15 B/s (using 122 data points, chi2=0.00)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,761 | INFO     | could have reported an average CPU frequency of 1973 MHz (9 samples)
[2025-12-13 11:09:07] 2025-12-13 16:08:01,761 | INFO     | ..............................
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . Timing measurements:
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . get job = 0 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . initial setup = 2 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . payload setup = 8 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . stage-in = 0 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,762 | INFO     | . payload execution = 10834 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,763 | INFO     | . stage-out = 2 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,763 | INFO     | . log creation = 0 s
[2025-12-13 11:09:07] 2025-12-13 16:08:01,763 | INFO     | ..............................
[2025-12-13 11:09:07] 2025-12-13 16:08:02,116 | INFO     | 
[2025-12-13 11:09:07] 2025-12-13 16:08:02,116 | INFO     | job summary report
[2025-12-13 11:09:07] 2025-12-13 16:08:02,116 | INFO     | --------------------------------------------------
[2025-12-13 11:09:07] 2025-12-13 16:08:02,117 | INFO     | PanDA job id: 6929218955
[2025-12-13 11:09:07] 2025-12-13 16:08:02,117 | INFO     | task id: 47898836
[2025-12-13 11:09:07] 2025-12-13 16:08:02,117 | INFO     | errors: (none)
[2025-12-13 11:09:07] 2025-12-13 16:08:02,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 11:09:07] 2025-12-13 16:08:02,117 | INFO     | pilot state: finished 
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | transexitcode: 0
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | exeerrorcode: 0
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | exeerrordiag: 
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | exitcode: 0
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | exitmsg: OK
[2025-12-13 11:09:07] 2025-12-13 16:08:02,118 | INFO     | cpuconsumptiontime: 81474 s
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | nevents: 400
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | neventsw: 0
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | pid: 12896
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | pgrp: 12896
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | corecount: 8
[2025-12-13 11:09:07] 2025-12-13 16:08:02,119 | INFO     | event service: False
[2025-12-13 11:09:07] 2025-12-13 16:08:02,120 | INFO     | sizes: {0: 2284002, 6: 2284264, 11: 2284292, 10846: 2313347, 10850: 2322345, 10853: 2322401, 10861: 2322787}
[2025-12-13 11:09:07] 2025-12-13 16:08:02,120 | INFO     | --------------------------------------------------
[2025-12-13 11:09:07] 2025-12-13 16:08:02,120 | INFO     | 
[2025-12-13 11:09:07] 2025-12-13 16:08:02,120 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 11:09:07] 2025-12-13 16:08:02,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 11:09:07] 2025-12-13 16:08:02,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 11:09:07] 2025-12-13 16:08:02,151 | INFO     | job 6929218955 has completed (purged errors)
[2025-12-13 11:09:07] 2025-12-13 16:08:02,152 | INFO     | overall cleanup function is called
[2025-12-13 11:09:07] 2025-12-13 16:08:03,160 | INFO     | --- collectZombieJob: --- 10, [12896]
[2025-12-13 11:09:07] 2025-12-13 16:08:03,160 | INFO     | zombie collector waiting for pid 12896
[2025-12-13 11:09:07] 2025-12-13 16:08:03,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 11:09:07] 2025-12-13 16:08:03,161 | INFO     | collected zombie processes
[2025-12-13 11:09:07] 2025-12-13 16:08:03,161 | INFO     | will attempt to kill all subprocesses of pid=12896
[2025-12-13 11:09:07] 2025-12-13 16:08:03,269 | INFO     | process IDs to be killed: [12896] (in reverse order)
[2025-12-13 11:09:07] 2025-12-13 16:08:03,332 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 11:09:07] 2025-12-13 16:08:03,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 11:09:07] 2025-12-13 16:08:03,336 | INFO     | did not find any defunct processes belonging to 12896
[2025-12-13 11:09:07] 2025-12-13 16:08:03,339 | INFO     | did not find any defunct processes belonging to 12896
[2025-12-13 11:09:07] 2025-12-13 16:08:03,339 | INFO     | ready for new job
[2025-12-13 11:09:07] 2025-12-13 16:08:03,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 11:09:07] 2025-12-13 16:08:03,341 | INFO     | ***************************************
[2025-12-13 11:09:07] 2025-12-13 16:08:03,341 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 11:09:07] 2025-12-13 16:08:03,341 | INFO     | ***************************************
[2025-12-13 11:09:07] 2025-12-13 16:08:03,341 | INFO     | 
[2025-12-13 11:09:07] 2025-12-13 16:08:03,342 | INFO     | architecture information:
[2025-12-13 11:09:07] 2025-12-13 16:08:03,343 | INFO     | executing command: cat /etc/os-release
[2025-12-13 11:09:07] 2025-12-13 16:08:03,361 | INFO     | cat /etc/os-release:
[2025-12-13 11:09:07] NAME="CentOS Linux"
[2025-12-13 11:09:07] VERSION="7 (Core)"
[2025-12-13 11:09:07] ID="centos"
[2025-12-13 11:09:07] ID_LIKE="rhel fedora"
[2025-12-13 11:09:07] VERSION_ID="7"
[2025-12-13 11:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 11:09:07] ANSI_COLOR="0;31"
[2025-12-13 11:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 11:09:07] HOME_URL="https://www.centos.org/"
[2025-12-13 11:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 11:09:07] 
[2025-12-13 11:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 11:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 11:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 11:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 11:09:07] 
[2025-12-13 11:09:07] 2025-12-13 16:08:03,361 | INFO     | ***************************************
[2025-12-13 11:09:07] 2025-12-13 16:08:03,864 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 11:09:07] 2025-12-13 16:08:03,884 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-12-13 11:09:07] 2025-12-13 16:08:03,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 11:09:07] 2025-12-13 16:08:03,885 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 11:09:07] 2025-12-13 16:08:03,885 | INFO     | update_server=False
[2025-12-13 11:09:07] 2025-12-13 16:08:03,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 11:09:07] 2025-12-13 16:08:03,886 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 11:09:07] 2025-12-13 16:08:04,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 11:09:07] 2025-12-13 16:08:04,037 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 11:09:07] 2025-12-13 16:08:04,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:09:07] 2025-12-13 16:08:04,046 | INFO     | will abort loop
[2025-12-13 11:09:07] 2025-12-13 16:08:04,304 | INFO     | all data control threads have been joined
[2025-12-13 11:09:07] 2025-12-13 16:08:04,392 | INFO     | all payload control threads have been joined
[2025-12-13 11:09:07] 2025-12-13 16:08:04,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 11:09:07] 2025-12-13 16:08:04,891 | INFO     | [job] retrieve thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:04,993 | INFO     | [data] copytool_in thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,039 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,043 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,052 | INFO     | [job] job monitor thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,114 | INFO     | all job control threads have been joined
[2025-12-13 11:09:07] 2025-12-13 16:08:05,309 | INFO     | [data] control thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,397 | INFO     | [payload] control thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,599 | INFO     | [payload] failed_post thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:05,891 | INFO     | [data] copytool_out thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:06,045 | INFO     | [payload] validate_post thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:06,120 | INFO     | [job] control thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:06,185 | INFO     | [job] validate thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:06,349 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:06,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:09:07] 2025-12-13 16:08:07,885 | INFO     | [job] queue monitor thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:08,459 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 11:09:07] 2025-12-13 16:08:34,412 | INFO     | PID=6480 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 11:09:07] 2025-12-13 16:08:34,412 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 11:09:07] 2025-12-13 16:08:34,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 11:09:07] 2025-12-13 16:08:34,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 11:09:07] 2025-12-13 16:09:00,810 | INFO     | [monitor] cgroup control has ended
[2025-12-13 11:09:07] 2025-12-13 16:09:02,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139870069786432)>', '<ExcThread(monitor, started 139869359695616)>']
[2025-12-13 11:09:07] 2025-12-13 16:09:02,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 11:09:07] 2025-12-13 16:09:02,548 | INFO     | [monitor] control thread has ended
[2025-12-13 11:09:07] 2025-12-13 16:09:07,229 | INFO     | all workflow threads have been joined
[2025-12-13 11:09:07] 2025-12-13 16:09:07,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 11:09:07] 2025-12-13 16:09:07,230 | INFO     | traces error code: 0
[2025-12-13 11:09:07] 2025-12-13 16:09:07,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 11:09:07] 2025-12-13 16:09:07,355 [wrapper] ==== pilot stdout END ====
[2025-12-13 11:09:07] 2025-12-13 16:09:07,360 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 11:09:07] 2025-12-13 16:09:07,365 [wrapper] pilotpid: 6480
[2025-12-13 11:09:07] 2025-12-13 16:09:07,370 [wrapper] Pilot exit status: 0
[2025-12-13 11:09:07] 2025-12-13 16:09:07,389 [wrapper] pandaids: 6929218955
[2025-12-13 11:09:07] 2025-12-13 16:09:07,445 [wrapper] cleanup supervisor_pilot 24841 6481
[2025-12-13 11:09:07] 2025-12-13 16:09:07,450 [wrapper] Test setup, not cleaning
[2025-12-13 11:09:07] 2025-12-13 16:09:07,454 [wrapper] apfmon messages muted
[2025-12-13 11:09:07] 2025-12-13 16:09:07,459 [wrapper] ==== wrapper stdout END ====
[2025-12-13 11:09:07] 2025-12-13 16:09:07,463 [wrapper] ==== wrapper stderr END ====
[2025-12-13 11:09:07]  *** Error codes and diagnostics ***
[2025-12-13 11:09:07]     "exeErrorCode": 0,
[2025-12-13 11:09:07]     "exeErrorDiag": "",
[2025-12-13 11:09:07]     "pilotErrorCode": 0,
[2025-12-13 11:09:07]     "pilotErrorDiag": "",
[2025-12-13 11:09:07]  *** Listing of results directory ***
[2025-12-13 11:09:07] total 411612
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 11:09:07] -rwx------ 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas       100 Dec 13 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 11:09:07] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 08:06 run_atlas
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas       105 Dec 13 08:06 job.xml
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas 214367604 Dec 13 08:06 EVNT.47898833._000021.pool.root.1
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:06 start_atlas.sh
[2025-12-13 11:09:07] drwxrwx--x 2 boincer umatlas      4096 Dec 13 08:06 shared
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas    592391 Dec 13 08:06 input.tar.gz
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas         0 Dec 13 08:06 boinc_lockfile
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas      2547 Dec 13 08:06 pandaJob.out
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas        57 Dec 13 08:06 setup.sh.local
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas    991736 Dec 13 08:06 agis_schedconf.cvmfs.json
[2025-12-13 11:09:07] drwx------ 5 boincer umatlas      4096 Dec 13 08:06 pilot3
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 11:01 init_data.xml
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas 199344666 Dec 13 11:07 HITS.47898836._000516.pool.root.1
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas       530 Dec 13 11:07 boinc_task_state.xml
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas      1048 Dec 13 11:07 memory_monitor_summary.json
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas   1516240 Dec 13 11:07 agis_ddmendpoints.agis.ALL.json
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas    418253 Dec 13 11:07 log.47898836._000516.job.log.tgz.1
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas      7848 Dec 13 11:08 heartbeat.json
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas        95 Dec 13 11:08 pilot_heartbeat.json
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 11:09 boinc_mmap_file
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas        28 Dec 13 11:09 wrapper_checkpoint.txt
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas      4931 Dec 13 11:09 pilotlog.txt
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas   1509887 Dec 13 11:09 log.47898836._000516.job.log.1
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas       357 Dec 13 11:09 output.list
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas       620 Dec 13 11:09 runtime_log
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas   1945600 Dec 13 11:09 result.tar.gz
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 11:09 runtime_log.err
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas       660 Dec 13 11:09 NXSNDmuTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqISKDmJ9LpOo.diag
[2025-12-13 11:09:07] -rw-r--r-- 1 boincer umatlas     20913 Dec 13 11:09 stderr.txt
[2025-12-13 11:09:07] HITS file was successfully produced:
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas 199344666 Dec 13 11:07 shared/HITS.pool.root.1
[2025-12-13 11:09:07]  *** Contents of shared directory: ***
[2025-12-13 11:09:07] total 406524
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas 214367604 Dec 13 08:06 ATLAS.root_0
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 08:06 start_atlas.sh
[2025-12-13 11:09:07] -rw-r--r-- 2 boincer umatlas    592391 Dec 13 08:06 input.tar.gz
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas 199344666 Dec 13 11:07 HITS.pool.root.1
[2025-12-13 11:09:07] -rw------- 1 boincer umatlas   1945600 Dec 13 11:09 result.tar.gz
11:09:09 (2700): run_atlas exited; CPU time 81418.227142
11:09:09 (2700): called boinc_finish(0)

</stderr_txt>
]]>

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