Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:14 (1445181): wrapper (7.7.26015): starting
09:35:14 (1445181): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 09:35:14] Arguments: --nthreads 8
[2025-12-13 09:35:14] Threads: 8
[2025-12-13 09:35:14] Checking for CVMFS
[2025-12-13 09:35:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 09:35:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 09:35:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 09:35:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 09:35:37] 2.13.3.0 12022 54521 367608 153963 2 133 26541246 32935937 41733 16776704 0 113696121 99.517 136509889 12169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 09:35:37] CVMFS is ok
[2025-12-13 09:35:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 09:35:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 09:35:37] Further information can be found at the LHC@home message board.
[2025-12-13 09:35:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 09:35:37] Checking for apptainer binary...
[2025-12-13 09:35:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 09:35:37] Running /usr/bin/apptainer --version
[2025-12-13 09:35:37] apptainer version 1.4.5-2.el9
[2025-12-13 09:35:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 09:35:39] c6-12-25-4.aglt2.org
[2025-12-13 09:35:39] apptainer works
[2025-12-13 09:35:39] Set ATHENA_PROC_NUMBER=8
[2025-12-13 09:35:39] Set ATHENA_CORE_NUMBER=8
[2025-12-13 09:35:40] Starting ATLAS job with PandaID=6929266150
[2025-12-13 09:35:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 20:23:24]  *** The last 200 lines of the pilot log: ***
[2025-12-14 20:23:25] 2025-12-15 01:21:59,626 | INFO     | intersect: -1976639959.6486995
[2025-12-14 20:23:25] 2025-12-15 01:21:59,654 | INFO     | chi2: 11.611176954293997
[2025-12-14 20:23:25] 2025-12-15 01:21:59,687 | INFO     | sum of square deviations: 2628640283256.2124
[2025-12-14 20:23:25] 2025-12-15 01:22:00,512 | INFO     | sum of deviations: 3520328799584.0107
[2025-12-14 20:23:25] 2025-12-15 01:22:00,513 | INFO     | mean x: 1765699096.938205
[2025-12-14 20:23:25] 2025-12-15 01:22:00,513 | INFO     | mean y: 2491542.82540461
[2025-12-14 20:23:25] 2025-12-15 01:22:00,513 | INFO     | intersect: -2362168780.5913873
[2025-12-14 20:23:25] 2025-12-15 01:22:00,525 | INFO     | chi2: 8.416338280173493
[2025-12-14 20:23:25] 2025-12-15 01:22:00,526 | INFO     | current chi2=8.416338280173493 (change=27.515200971414032 %)
[2025-12-14 20:23:25] 2025-12-15 01:22:00,567 | INFO     | sum of square deviations: 2609350331059.06
[2025-12-14 20:23:25] 2025-12-15 01:22:00,944 | INFO     | time since job start (125038s) is within the limit (174528.0s)
[2025-12-14 20:23:25] 2025-12-15 01:22:01,488 | INFO     | monitor loop #3172: job 0:6929266150 is in state 'finished'
[2025-12-14 20:23:25] 2025-12-15 01:22:01,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 20:23:25] 2025-12-15 01:22:01,723 | INFO     | sum of deviations: 3507982992859.5723
[2025-12-14 20:23:25] 2025-12-15 01:22:01,723 | INFO     | mean x: 1765698944.439528
[2025-12-14 20:23:25] 2025-12-15 01:22:01,724 | INFO     | mean y: 2491445.2241887907
[2025-12-14 20:23:25] 2025-12-15 01:22:01,724 | INFO     | intersect: -2371295544.53965
[2025-12-14 20:23:25] 2025-12-15 01:22:01,750 | INFO     | chi2: 8.416126842089122
[2025-12-14 20:23:25] 2025-12-15 01:22:01,751 | INFO     | current chi2=8.416126842089122 (change=0.002512233673744187 %)
[2025-12-14 20:23:25] 2025-12-15 01:22:01,751 | INFO     | right removable region: 2033
[2025-12-14 20:23:25] 2025-12-15 01:22:01,780 | INFO     | sum of square deviations: 2628639364596.2144
[2025-12-14 20:23:25] 2025-12-15 01:22:02,989 | INFO     | time since job start (125040s) is within the limit (174528.0s)
[2025-12-14 20:23:25] 2025-12-15 01:22:03,072 | INFO     | sum of deviations: 2318143799147.006
[2025-12-14 20:23:25] 2025-12-15 01:22:03,072 | INFO     | mean x: 1765699401.938205
[2025-12-14 20:23:25] 2025-12-15 01:22:03,073 | INFO     | mean y: 2492312.7778322706
[2025-12-14 20:23:25] 2025-12-15 01:22:03,073 | INFO     | intersect: -1554642216.5490444
[2025-12-14 20:23:25] 2025-12-15 01:22:03,112 | INFO     | chi2: 7.997186277675977
[2025-12-14 20:23:25] 2025-12-15 01:22:03,113 | INFO     | current chi2=7.997186277675977 (change=31.125102053341024 %)
[2025-12-14 20:23:25] 2025-12-15 01:22:03,148 | INFO     | sum of square deviations: 2609348867364.9453
[2025-12-14 20:23:25] 2025-12-15 01:22:03,919 | INFO     | sum of deviations: 1824955236906.1602
[2025-12-14 20:23:25] 2025-12-15 01:22:03,920 | INFO     | mean x: 1765699554.4390364
[2025-12-14 20:23:25] 2025-12-15 01:22:03,920 | INFO     | mean y: 2496211.3883972466
[2025-12-14 20:23:25] 2025-12-15 01:22:03,921 | INFO     | intersect: -1232418249.0648959
[2025-12-14 20:23:25] 2025-12-15 01:22:03,933 | INFO     | chi2: 5.987468836695729
[2025-12-14 20:23:25] 2025-12-15 01:22:03,934 | INFO     | current chi2=5.987468836695729 (change=25.130306725383434 %)
[2025-12-14 20:23:25] 2025-12-15 01:22:03,958 | INFO     | sum of square deviations: 2590152976434.661
[2025-12-14 20:23:25] 2025-12-15 01:22:04,105 | INFO     | monitor loop #3173: job 0:6929266150 is in state 'finished'
[2025-12-14 20:23:25] 2025-12-15 01:22:04,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 20:23:25] 2025-12-15 01:22:04,664 | INFO     | sum of deviations: 1424593469131.622
[2025-12-14 20:23:25] 2025-12-15 01:22:04,673 | INFO     | mean x: 1765699706.9398718
[2025-12-14 20:23:25] 2025-12-15 01:22:04,673 | INFO     | mean y: 2499391.480532282
[2025-12-14 20:23:25] 2025-12-15 01:22:04,674 | INFO     | intersect: -968641808.9965948
[2025-12-14 20:23:25] 2025-12-15 01:22:04,690 | INFO     | chi2: 4.660450316795105
[2025-12-14 20:23:25] 2025-12-15 01:22:04,690 | INFO     | current chi2=4.660450316795105 (change=22.163263911582355 %)
[2025-12-14 20:23:25] 2025-12-15 01:22:04,691 | INFO     | left removable region: 30
[2025-12-14 20:23:25] 2025-12-15 01:22:04,697 | INFO     | sum of square deviations: 2491851770074.1816
[2025-12-14 20:23:25] 2025-12-15 01:22:04,902 | INFO     | sum of deviations: 1421565645838.12
[2025-12-14 20:23:25] 2025-12-15 01:22:04,903 | INFO     | mean x: 1765699828.946081
[2025-12-14 20:23:25] 2025-12-15 01:22:04,903 | INFO     | mean y: 2508133.5566650024
[2025-12-14 20:23:25] 2025-12-15 01:22:04,903 | INFO     | intersect: -1004798259.1575655
[2025-12-14 20:23:25] 2025-12-15 01:22:04,909 | INFO     | chi2: 0.5798312782677059
[2025-12-14 20:23:25] 2025-12-15 01:22:04,909 | INFO     | current memory leak: 0.57 B/s (using 2003 data points, chi2=0.58)
[2025-12-14 20:23:25] 2025-12-15 01:22:04,914 | INFO     | could have reported an average CPU frequency of 999 MHz (70 samples)
[2025-12-14 20:23:25] 2025-12-15 01:22:04,915 | INFO     | ..............................
[2025-12-14 20:23:25] 2025-12-15 01:22:04,915 | INFO     | . Timing measurements:
[2025-12-14 20:23:25] 2025-12-15 01:22:04,916 | INFO     | . get job = 1 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,916 | INFO     | . initial setup = 14 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,916 | INFO     | . payload setup = 81 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,917 | INFO     | . stage-in = 1 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,917 | INFO     | . payload execution = 124732 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,917 | INFO     | . stage-out = 18 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,917 | INFO     | . log creation = 3 s
[2025-12-14 20:23:25] 2025-12-15 01:22:04,918 | INFO     | ..............................
[2025-12-14 20:23:25] 2025-12-15 01:22:05,075 | INFO     | time since job start (125043s) is within the limit (174528.0s)
[2025-12-14 20:23:25] 2025-12-15 01:22:05,194 | INFO     | 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,195 | INFO     | job summary report
[2025-12-14 20:23:25] 2025-12-15 01:22:05,195 | INFO     | --------------------------------------------------
[2025-12-14 20:23:25] 2025-12-15 01:22:05,195 | INFO     | PanDA job id: 6929266150
[2025-12-14 20:23:25] 2025-12-15 01:22:05,195 | INFO     | task id: 47898763
[2025-12-14 20:23:25] 2025-12-15 01:22:05,195 | INFO     | errors: (none)
[2025-12-14 20:23:25] 2025-12-15 01:22:05,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,196 | INFO     | pilot state: finished 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,196 | INFO     | transexitcode: 0
[2025-12-14 20:23:25] 2025-12-15 01:22:05,196 | INFO     | exeerrorcode: 0
[2025-12-14 20:23:25] 2025-12-15 01:22:05,202 | INFO     | exeerrordiag: 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,202 | INFO     | exitcode: 0
[2025-12-14 20:23:25] 2025-12-15 01:22:05,202 | INFO     | exitmsg: OK
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | cpuconsumptiontime: 159882 s
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | nevents: 400
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | neventsw: 0
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | pid: 1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | pgrp: 1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:05,203 | INFO     | corecount: 8
[2025-12-14 20:23:25] 2025-12-15 01:22:05,204 | INFO     | event service: False
[2025-12-14 20:23:25] 2025-12-15 01:22:05,204 | INFO     | sizes: {0: 2283123, 2: 2283724, 3: 2283808, 6: 2283864, 8: 2283864, 10: 2284035, 11: 2284191, 25: 2284219, 37: 2284247, 49: 2284275, 61: 2284565, 63: 2284873, 76: 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,204 | INFO     | --------------------------------------------------
[2025-12-14 20:23:25] 2025-12-15 01:22:05,204 | INFO     | 
[2025-12-14 20:23:25] 2025-12-15 01:22:05,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 20:23:25] 2025-12-15 01:22:05,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,384 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,399 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 20:23:25] 2025-12-15 01:22:05,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,399 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 20:23:25] 2025-12-15 01:22:05,400 | INFO     | job 6929266150 has completed (purged errors)
[2025-12-14 20:23:25] 2025-12-15 01:22:05,400 | INFO     | overall cleanup function is called
[2025-12-14 20:23:25] 2025-12-15 01:22:06,448 | INFO     | --- collectZombieJob: --- 10, [1469960]
[2025-12-14 20:23:25] 2025-12-15 01:22:06,448 | INFO     | zombie collector waiting for pid 1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:06,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 20:23:25] 2025-12-15 01:22:06,449 | INFO     | collected zombie processes
[2025-12-14 20:23:25] 2025-12-15 01:22:06,449 | INFO     | will attempt to kill all subprocesses of pid=1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:16,096 | INFO     | process IDs to be killed: [1469960] (in reverse order)
[2025-12-14 20:23:25] 2025-12-15 01:22:16,695 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 20:23:25] 2025-12-15 01:22:16,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 20:23:25] 2025-12-15 01:22:16,836 | INFO     | did not find any defunct processes belonging to 1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:17,057 | INFO     | did not find any defunct processes belonging to 1469960
[2025-12-14 20:23:25] 2025-12-15 01:22:17,088 | INFO     | ready for new job
[2025-12-14 20:23:25] 2025-12-15 01:22:17,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 20:23:25] 2025-12-15 01:22:17,191 | INFO     | ***************************************
[2025-12-14 20:23:25] 2025-12-15 01:22:17,192 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 20:23:25] 2025-12-15 01:22:17,192 | INFO     | ***************************************
[2025-12-14 20:23:25] 2025-12-15 01:22:17,192 | INFO     | 
[2025-12-14 20:23:25] 2025-12-15 01:22:17,352 | INFO     | architecture information:
[2025-12-14 20:23:25] 2025-12-15 01:22:17,381 | INFO     | executing command: cat /etc/os-release
[2025-12-14 20:23:25] 2025-12-15 01:22:17,564 | INFO     | cat /etc/os-release:
[2025-12-14 20:23:25] NAME="CentOS Linux"
[2025-12-14 20:23:25] VERSION="7 (Core)"
[2025-12-14 20:23:25] ID="centos"
[2025-12-14 20:23:25] ID_LIKE="rhel fedora"
[2025-12-14 20:23:25] VERSION_ID="7"
[2025-12-14 20:23:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 20:23:25] ANSI_COLOR="0;31"
[2025-12-14 20:23:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 20:23:25] HOME_URL="https://www.centos.org/"
[2025-12-14 20:23:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 20:23:25] 
[2025-12-14 20:23:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 20:23:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 20:23:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 20:23:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 20:23:25] 
[2025-12-14 20:23:25] 2025-12-15 01:22:17,565 | INFO     | ***************************************
[2025-12-14 20:23:25] 2025-12-15 01:22:18,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 20:23:25] 2025-12-15 01:22:18,224 | INFO     | sufficient remaining disk space (94170513408 B)
[2025-12-14 20:23:25] 2025-12-15 01:22:18,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 20:23:25] 2025-12-15 01:22:18,225 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 20:23:25] 2025-12-15 01:22:18,225 | INFO     | update_server=False
[2025-12-14 20:23:25] 2025-12-15 01:22:18,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 20:23:25] 2025-12-15 01:22:18,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 20:23:25] 2025-12-15 01:22:18,227 | INFO     | aborting loop
[2025-12-14 20:23:25] 2025-12-15 01:22:18,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 20:23:25] 2025-12-15 01:22:18,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 20:23:25] 2025-12-15 01:22:18,500 | INFO     | all payload control threads have been joined
[2025-12-14 20:23:25] 2025-12-15 01:22:18,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 20:23:25] 2025-12-15 01:22:19,224 | INFO     | all job control threads have been joined
[2025-12-14 20:23:25] 2025-12-15 01:22:19,232 | INFO     | [job] retrieve thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,234 | INFO     | [job] job monitor thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,328 | INFO     | all data control threads have been joined
[2025-12-14 20:23:25] 2025-12-15 01:22:19,520 | INFO     | [payload] control thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,608 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,609 | INFO     | [job] validate thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,618 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,668 | INFO     | [job] queue monitor thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:19,915 | INFO     | [payload] failed_post thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,231 | INFO     | [job] control thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,334 | INFO     | [data] control thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,348 | INFO     | [payload] validate_post thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,512 | INFO     | [data] copytool_out thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,706 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,737 | INFO     | [data] copytool_in thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:20,738 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:22,251 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 20:23:25] 2025-12-15 01:22:22,753 | INFO     | [monitor] cgroup control has ended
[2025-12-14 20:23:25] 2025-12-15 01:22:23,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839384581952)>', '<ExcThread(monitor, started 139838363793152)>']
[2025-12-14 20:23:25] 2025-12-15 01:22:28,471 | INFO     | all workflow threads have been joined
[2025-12-14 20:23:25] 2025-12-15 01:22:28,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 20:23:25] 2025-12-15 01:22:28,472 | INFO     | traces error code: 0
[2025-12-14 20:23:25] 2025-12-15 01:22:28,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 20:23:25] 2025-12-15 01:22:58,817 | INFO     | PID=1453818 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-14 20:23:25] 2025-12-15 01:22:58,818 | INFO     | .. there are 45 such processes running
[2025-12-14 20:23:25] 2025-12-15 01:22:58,861 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 20:23:25] 2025-12-15 01:22:58,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 20:23:25] 2025-12-15 01:22:58,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 20:23:25] 2025-12-15 01:22:58,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 20:23:25] 2025-12-15 01:22:58,862 | INFO     | [monitor] control thread has ended
[2025-12-14 20:23:25] 2025-12-15 01:22:59,453 [wrapper] supervise_pilot (15 min periods counter: 140)
[2025-12-14 20:23:25] 2025-12-15 01:23:02,517 [wrapper] ==== pilot stdout END ====
[2025-12-14 20:23:25] 2025-12-15 01:23:02,527 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 20:23:25] 2025-12-15 01:23:02,538 [wrapper] pilotpid: 1453818
[2025-12-14 20:23:25] 2025-12-15 01:23:02,610 [wrapper] Pilot exit status: 0
[2025-12-14 20:23:25] 2025-12-15 01:23:02,722 [wrapper] pandaids: 6929266150
[2025-12-14 20:23:25] 2025-12-15 01:23:03,317 [wrapper] cleanup supervisor_pilot 3481025 1453820
[2025-12-14 20:23:25] 2025-12-15 01:23:03,327 [wrapper] Test setup, not cleaning
[2025-12-14 20:23:25] 2025-12-15 01:23:03,334 [wrapper] apfmon messages muted
[2025-12-14 20:23:25] 2025-12-15 01:23:03,354 [wrapper] ==== wrapper stdout END ====
[2025-12-14 20:23:25] 2025-12-15 01:23:03,384 [wrapper] ==== wrapper stderr END ====
[2025-12-14 20:23:25]  *** Error codes and diagnostics ***
[2025-12-14 20:23:25]     "exeErrorCode": 0,
[2025-12-14 20:23:25]     "exeErrorDiag": "",
[2025-12-14 20:23:25]     "pilotErrorCode": 0,
[2025-12-14 20:23:25]     "pilotErrorDiag": "",
[2025-12-14 20:23:25]  *** Listing of results directory ***
[2025-12-14 20:23:25] total 458288
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-14 20:23:25] -rwx------. 1 boincer umatlas     36322 Dec 13 05:03 runpilot2-wrapper.sh
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 05:03 queuedata.json
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas       100 Dec 13 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 20:23:25] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 09:35 run_atlas
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas       105 Dec 13 09:35 job.xml
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas 222826147 Dec 13 09:35 EVNT.47898761._000122.pool.root.1
[2025-12-14 20:23:25] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 09:35 shared
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas    592390 Dec 13 09:35 input.tar.gz
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 09:35 start_atlas.sh
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas         0 Dec 13 09:35 boinc_lockfile
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas      2504 Dec 13 09:35 pandaJob.out
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas        57 Dec 13 09:35 setup.sh.local
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas    991736 Dec 13 09:37 agis_schedconf.cvmfs.json
[2025-12-14 20:23:25] drwx------. 5 boincer umatlas      4096 Dec 13 09:38 pilot3
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas 222138762 Dec 14 20:15 HITS.47898763._002409.pool.root.1
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas       533 Dec 14 20:16 boinc_task_state.xml
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas      6880 Dec 14 20:20 init_data.xml
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas      1058 Dec 14 20:20 memory_monitor_summary.json
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas   1516240 Dec 14 20:20 agis_ddmendpoints.agis.ALL.json
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas   1348393 Dec 14 20:20 log.47898763._002409.job.log.tgz.1
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas      7838 Dec 14 20:22 heartbeat.json
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas        96 Dec 14 20:22 pilot_heartbeat.json
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas       824 Dec 14 20:22 pilotlog.txt
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas   8852093 Dec 14 20:23 log.47898763._002409.job.log.1
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas       357 Dec 14 20:23 output.list
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas       620 Dec 14 20:23 runtime_log
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas  10219520 Dec 14 20:23 result.tar.gz
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas      9354 Dec 14 20:23 runtime_log.err
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas       665 Dec 14 20:23 kTwKDmzdbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTpSKDmL7PIFn.diag
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas        30 Dec 14 20:23 wrapper_checkpoint.txt
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 20:23 boinc_mmap_file
[2025-12-14 20:23:25] -rw-r--r--. 1 boincer umatlas     21280 Dec 14 20:23 stderr.txt
[2025-12-14 20:23:25] HITS file was successfully produced:
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas 222138762 Dec 14 20:15 shared/HITS.pool.root.1
[2025-12-14 20:23:25]  *** Contents of shared directory: ***
[2025-12-14 20:23:25] total 445124
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas 222826147 Dec 13 09:35 ATLAS.root_0
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas    592390 Dec 13 09:35 input.tar.gz
[2025-12-14 20:23:25] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 09:35 start_atlas.sh
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas 222138762 Dec 14 20:15 HITS.pool.root.1
[2025-12-14 20:23:25] -rw-------. 1 boincer umatlas  10219520 Dec 14 20:23 result.tar.gz
20:23:26 (1445181): run_atlas exited; CPU time 170640.852598
20:23:26 (1445181): called boinc_finish(0)

</stderr_txt>
]]>

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