Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:41:58 (21642): wrapper (7.7.26015): starting
07:41:58 (21642): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 07:41:58] Arguments: --nthreads 8
[2025-12-13 07:41:58] Threads: 8
[2025-12-13 07:41:58] Checking for CVMFS
[2025-12-13 07:41:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 07:41:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 07:41:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 07:41:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 07:41:58] 2.11.2.0 8814 142155 133728 153961 0 188 16213751 18432000 1824 130560 0 101288514 99.976 5811715 32435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 07:41:58] CVMFS is ok
[2025-12-13 07:41:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 07:41:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 07:41:58] Further information can be found at the LHC@home message board.
[2025-12-13 07:41:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 07:41:58] Checking for apptainer binary...
[2025-12-13 07:41:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 07:41:58] Running /usr/bin/apptainer --version
[2025-12-13 07:41:58] apptainer version 1.3.2-1.el7
[2025-12-13 07:41:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 07:41:59] c-206-19.aglt2.org
[2025-12-13 07:41:59] apptainer works
[2025-12-13 07:41:59] Set ATHENA_PROC_NUMBER=8
[2025-12-13 07:41:59] Set ATHENA_CORE_NUMBER=8
[2025-12-13 07:41:59] Starting ATLAS job with PandaID=6929266262
[2025-12-13 07:41:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 11:59:39]  *** The last 200 lines of the pilot log: ***
[2025-12-13 11:59:39] 2025-12-13 16:58:47,475 | INFO     | number of running child processes to parent process 31801: 1
[2025-12-13 11:59:39] 2025-12-13 16:58:47,475 | INFO     | maximum number of monitored processes: 6
[2025-12-13 11:59:39] 2025-12-13 16:58:49,241 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 11:59:39] 2025-12-13 16:58:49,247 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2111.8333333333335
[2025-12-13 11:59:39] 2025-12-13 16:58:49,251 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929266262/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,252 | INFO     | extracted standard info from prmon json
[2025-12-13 11:59:39] 2025-12-13 16:58:49,252 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 11:59:39] 2025-12-13 16:58:49,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 11:59:39] 2025-12-13 16:58:49,253 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 11:59:39] 2025-12-13 16:58:49,253 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 11:59:39] 2025-12-13 16:58:49,260 | INFO     | fitting pss+swap vs Time
[2025-12-13 11:59:39] 2025-12-13 16:58:49,261 | INFO     | sum of square deviations: 4962187923.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,264 | INFO     | sum of deviations: 42536597470.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,264 | INFO     | mean x: 1765637407.5
[2025-12-13 11:59:39] 2025-12-13 16:58:49,264 | INFO     | mean y: 2485175.285714286
[2025-12-13 11:59:39] 2025-12-13 16:58:49,264 | INFO     | intersect: -15132815794.00848
[2025-12-13 11:59:39] 2025-12-13 16:58:49,265 | INFO     | chi2: 1.4796485425617845
[2025-12-13 11:59:39] 2025-12-13 16:58:49,265 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,268 | INFO     | sum of deviations: 41405332706.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,268 | INFO     | mean x: 1765637255.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,268 | INFO     | mean y: 2484579.170040486
[2025-12-13 11:59:39] 2025-12-13 16:58:49,268 | INFO     | intersect: -15643236994.48949
[2025-12-13 11:59:39] 2025-12-13 16:58:49,269 | INFO     | chi2: 1.4802107984865545
[2025-12-13 11:59:39] 2025-12-13 16:58:49,269 | INFO     | current chi2=1.4802107984865545 (change=-0.037999288925499454 %)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,269 | INFO     | right removable region: 246
[2025-12-13 11:59:39] 2025-12-13 16:58:49,270 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,271 | INFO     | sum of deviations: 3131543762.9999995
[2025-12-13 11:59:39] 2025-12-13 16:58:49,272 | INFO     | mean x: 1765637560.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,272 | INFO     | mean y: 2505758.8016194333
[2025-12-13 11:59:39] 2025-12-13 16:58:49,272 | INFO     | intersect: -1180802454.733777
[2025-12-13 11:59:39] 2025-12-13 16:58:49,272 | INFO     | chi2: 0.06880402855146807
[2025-12-13 11:59:39] 2025-12-13 16:58:49,272 | INFO     | current chi2=0.06880402855146807 (change=95.34997490469294 %)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,273 | INFO     | sum of square deviations: 4394577280.5
[2025-12-13 11:59:39] 2025-12-13 16:58:49,274 | INFO     | sum of deviations: -3991395706.4999986
[2025-12-13 11:59:39] 2025-12-13 16:58:49,274 | INFO     | mean x: 1765637712.5
[2025-12-13 11:59:39] 2025-12-13 16:58:49,274 | INFO     | mean y: 2509647.5165289254
[2025-12-13 11:59:39] 2025-12-13 16:58:49,274 | INFO     | intersect: 1606158493.6019375
[2025-12-13 11:59:39] 2025-12-13 16:58:49,275 | INFO     | chi2: 0.03007631081031795
[2025-12-13 11:59:39] 2025-12-13 16:58:49,275 | INFO     | current chi2=0.03007631081031795 (change=56.28699155628699 %)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,275 | INFO     | sum of square deviations: 4127772278.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,276 | INFO     | sum of deviations: -2101802396.9999988
[2025-12-13 11:59:39] 2025-12-13 16:58:49,276 | INFO     | mean x: 1765637865.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | mean y: 2508564.810126582
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | intersect: 901546023.0220982
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | chi2: 0.02834347705209166
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | current chi2=0.02834347705209166 (change=5.761457145308613 %)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | left removable region: 30
[2025-12-13 11:59:39] 2025-12-13 16:58:49,277 | INFO     | sum of square deviations: 3124858590.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | sum of deviations: 6961328662.0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | mean x: 1765638139.5
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | mean y: 2502245.1296296297
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | intersect: -3930855707.948722
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | chi2: 0.0059401018026725184
[2025-12-13 11:59:39] 2025-12-13 16:58:49,279 | INFO     | current memory leak: 2.23 B/s (using 216 data points, chi2=0.01)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | could have reported an average CPU frequency of 2453 MHz (12 samples)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | ..............................
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . Timing measurements:
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . get job = 0 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . initial setup = 2 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . payload setup = 4 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . stage-in = 0 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,280 | INFO     | . payload execution = 15371 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,281 | INFO     | . stage-out = 1 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,281 | INFO     | . log creation = 0 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,281 | INFO     | ..............................
[2025-12-13 11:59:39] 2025-12-13 16:58:49,354 | INFO     | 
[2025-12-13 11:59:39] 2025-12-13 16:58:49,354 | INFO     | job summary report
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | --------------------------------------------------
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | PanDA job id: 6929266262
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | task id: 47898763
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | errors: (none)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | pilot state: finished 
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | transexitcode: 0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | exeerrorcode: 0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | exeerrordiag: 
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | exitcode: 0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,355 | INFO     | exitmsg: OK
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | cpuconsumptiontime: 117421 s
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | nevents: 400
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | neventsw: 0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | pid: 31801
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | pgrp: 31801
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | corecount: 8
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | event service: False
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | sizes: {0: 2283781, 1: 2283980, 4: 2284242, 11: 2284270, 15380: 2315452, 15382: 2324450, 15383: 2324634, 15386: 2324828}
[2025-12-13 11:59:39] 2025-12-13 16:58:49,356 | INFO     | --------------------------------------------------
[2025-12-13 11:59:39] 2025-12-13 16:58:49,357 | INFO     | 
[2025-12-13 11:59:39] 2025-12-13 16:58:49,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | job 6929266262 has completed (purged errors)
[2025-12-13 11:59:39] 2025-12-13 16:58:49,372 | INFO     | overall cleanup function is called
[2025-12-13 11:59:39] 2025-12-13 16:58:50,377 | INFO     | --- collectZombieJob: --- 10, [31801]
[2025-12-13 11:59:39] 2025-12-13 16:58:50,377 | INFO     | zombie collector waiting for pid 31801
[2025-12-13 11:59:39] 2025-12-13 16:58:50,377 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 11:59:39] 2025-12-13 16:58:50,377 | INFO     | collected zombie processes
[2025-12-13 11:59:39] 2025-12-13 16:58:50,377 | INFO     | will attempt to kill all subprocesses of pid=31801
[2025-12-13 11:59:39] 2025-12-13 16:58:50,481 | INFO     | process IDs to be killed: [31801] (in reverse order)
[2025-12-13 11:59:39] 2025-12-13 16:58:50,522 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 11:59:39] 2025-12-13 16:58:50,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 11:59:39] 2025-12-13 16:58:50,525 | INFO     | did not find any defunct processes belonging to 31801
[2025-12-13 11:59:39] 2025-12-13 16:58:50,528 | INFO     | did not find any defunct processes belonging to 31801
[2025-12-13 11:59:39] 2025-12-13 16:58:50,528 | INFO     | ready for new job
[2025-12-13 11:59:39] 2025-12-13 16:58:50,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 11:59:39] 2025-12-13 16:58:50,530 | INFO     | ***************************************
[2025-12-13 11:59:39] 2025-12-13 16:58:50,530 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 11:59:39] 2025-12-13 16:58:50,530 | INFO     | ***************************************
[2025-12-13 11:59:39] 2025-12-13 16:58:50,531 | INFO     | 
[2025-12-13 11:59:39] 2025-12-13 16:58:50,532 | INFO     | architecture information:
[2025-12-13 11:59:39] 2025-12-13 16:58:50,532 | INFO     | executing command: cat /etc/os-release
[2025-12-13 11:59:39] 2025-12-13 16:58:50,545 | INFO     | cat /etc/os-release:
[2025-12-13 11:59:39] NAME="CentOS Linux"
[2025-12-13 11:59:39] VERSION="7 (Core)"
[2025-12-13 11:59:39] ID="centos"
[2025-12-13 11:59:39] ID_LIKE="rhel fedora"
[2025-12-13 11:59:39] VERSION_ID="7"
[2025-12-13 11:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 11:59:39] ANSI_COLOR="0;31"
[2025-12-13 11:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 11:59:39] HOME_URL="https://www.centos.org/"
[2025-12-13 11:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 11:59:39] 
[2025-12-13 11:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 11:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 11:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 11:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 11:59:39] 
[2025-12-13 11:59:39] 2025-12-13 16:58:50,545 | INFO     | ***************************************
[2025-12-13 11:59:39] 2025-12-13 16:58:51,048 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 11:59:39] 2025-12-13 16:58:51,061 | INFO     | sufficient remaining disk space (28178382848 B)
[2025-12-13 11:59:39] 2025-12-13 16:58:51,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 11:59:39] 2025-12-13 16:58:51,061 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 11:59:39] 2025-12-13 16:58:51,061 | INFO     | update_server=False
[2025-12-13 11:59:39] 2025-12-13 16:58:51,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 11:59:39] 2025-12-13 16:58:51,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 11:59:39] 2025-12-13 16:58:51,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:59:39] 2025-12-13 16:58:51,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 11:59:39] 2025-12-13 16:58:51,062 | INFO     | aborting loop
[2025-12-13 11:59:39] 2025-12-13 16:58:51,248 | INFO     | all job control threads have been joined
[2025-12-13 11:59:39] 2025-12-13 16:58:51,262 | INFO     | all data control threads have been joined
[2025-12-13 11:59:39] 2025-12-13 16:58:51,388 | INFO     | all payload control threads have been joined
[2025-12-13 11:59:39] 2025-12-13 16:58:51,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 11:59:39] 2025-12-13 16:58:52,064 | INFO     | [job] queue monitor thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,067 | INFO     | [job] retrieve thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,068 | INFO     | [job] job monitor thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,251 | INFO     | [job] validate thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,253 | INFO     | [payload] failed_post thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,253 | INFO     | [job] control thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,267 | INFO     | [data] control thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,303 | INFO     | [data] copytool_in thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,322 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,392 | INFO     | [payload] control thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,851 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:52,959 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:53,067 | INFO     | [data] copytool_out thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:53,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:53,627 | INFO     | [payload] validate_post thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:58:55,585 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 11:59:39] 2025-12-13 16:59:20,646 | INFO     | PID=25409 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 11:59:39] 2025-12-13 16:59:20,646 | INFO     | .. there are 3 such processes running
[2025-12-13 11:59:39] 2025-12-13 16:59:20,646 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 11:59:39] 2025-12-13 16:59:20,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 11:59:39] 2025-12-13 16:59:20,646 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 11:59:39] 2025-12-13 16:59:34,099 | INFO     | [monitor] cgroup control has ended
[2025-12-13 11:59:39] 2025-12-13 16:59:34,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216457598784)>', '<ExcThread(monitor, started 140216002123520)>']
[2025-12-13 11:59:39] 2025-12-13 16:59:34,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 11:59:39] 2025-12-13 16:59:34,704 | INFO     | [monitor] control thread has ended
[2025-12-13 11:59:39] 2025-12-13 16:59:39,459 | INFO     | all workflow threads have been joined
[2025-12-13 11:59:39] 2025-12-13 16:59:39,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 11:59:39] 2025-12-13 16:59:39,460 | INFO     | traces error code: 0
[2025-12-13 11:59:39] 2025-12-13 16:59:39,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 11:59:39] 2025-12-13 16:59:39,546 [wrapper] ==== pilot stdout END ====
[2025-12-13 11:59:39] 2025-12-13 16:59:39,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 11:59:39] 2025-12-13 16:59:39,551 [wrapper] pilotpid: 25409
[2025-12-13 11:59:39] 2025-12-13 16:59:39,554 [wrapper] Pilot exit status: 0
[2025-12-13 11:59:39] 2025-12-13 16:59:39,563 [wrapper] pandaids: 6929266262
[2025-12-13 11:59:39] 2025-12-13 16:59:39,591 [wrapper] cleanup supervisor_pilot 26955 25410
[2025-12-13 11:59:39] 2025-12-13 16:59:39,594 [wrapper] Test setup, not cleaning
[2025-12-13 11:59:39] 2025-12-13 16:59:39,596 [wrapper] apfmon messages muted
[2025-12-13 11:59:39] 2025-12-13 16:59:39,598 [wrapper] ==== wrapper stdout END ====
[2025-12-13 11:59:39] 2025-12-13 16:59:39,600 [wrapper] ==== wrapper stderr END ====
[2025-12-13 11:59:39]  *** Error codes and diagnostics ***
[2025-12-13 11:59:39]     "exeErrorCode": 0,
[2025-12-13 11:59:39]     "exeErrorDiag": "",
[2025-12-13 11:59:39]     "pilotErrorCode": 0,
[2025-12-13 11:59:39]     "pilotErrorDiag": "",
[2025-12-13 11:59:39]  *** Listing of results directory ***
[2025-12-13 11:59:39] total 447268
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 05:01 pilot3.tar.gz
[2025-12-13 11:59:39] -rwx------ 1 boincer umatlas     36322 Dec 13 05:03 runpilot2-wrapper.sh
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 05:03 queuedata.json
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas       100 Dec 13 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 11:59:39] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 07:41 run_atlas
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas       105 Dec 13 07:41 job.xml
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas 226224357 Dec 13 07:41 EVNT.47898761._000126.pool.root.1
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 07:41 start_atlas.sh
[2025-12-13 11:59:39] drwxrwx--x 2 boincer umatlas      4096 Dec 13 07:41 shared
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 07:41 input.tar.gz
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas         0 Dec 13 07:41 boinc_lockfile
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas      2504 Dec 13 07:41 pandaJob.out
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas        57 Dec 13 07:41 setup.sh.local
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas    991736 Dec 13 07:42 agis_schedconf.cvmfs.json
[2025-12-13 11:59:39] drwx------ 5 boincer umatlas      4096 Dec 13 07:42 pilot3
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 11:57 init_data.xml
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas 222586230 Dec 13 11:58 HITS.47898763._002521.pool.root.1
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas        95 Dec 13 11:58 pilot_heartbeat.json
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas       532 Dec 13 11:58 boinc_task_state.xml
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas      1053 Dec 13 11:58 memory_monitor_summary.json
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas   1516240 Dec 13 11:58 agis_ddmendpoints.agis.ALL.json
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas    489923 Dec 13 11:58 log.47898763._002521.job.log.tgz.1
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas      7857 Dec 13 11:58 heartbeat.json
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 11:59 boinc_mmap_file
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas        29 Dec 13 11:59 wrapper_checkpoint.txt
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas      4821 Dec 13 11:59 pilotlog.txt
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas   2146539 Dec 13 11:59 log.47898763._002521.job.log.1
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas       357 Dec 13 11:59 output.list
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas       620 Dec 13 11:59 runtime_log
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas   2652160 Dec 13 11:59 result.tar.gz
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas       662 Dec 13 11:59 w2SMDmzdbo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNiOKDmtaYDZm.diag
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 11:59 runtime_log.err
[2025-12-13 11:59:39] -rw-r--r-- 1 boincer umatlas     21064 Dec 13 11:59 stderr.txt
[2025-12-13 11:59:39] HITS file was successfully produced:
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas 222586230 Dec 13 11:58 shared/HITS.pool.root.1
[2025-12-13 11:59:39]  *** Contents of shared directory: ***
[2025-12-13 11:59:39] total 441488
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas 226224357 Dec 13 07:41 ATLAS.root_0
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 07:41 start_atlas.sh
[2025-12-13 11:59:39] -rw-r--r-- 2 boincer umatlas    592394 Dec 13 07:41 input.tar.gz
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas 222586230 Dec 13 11:58 HITS.pool.root.1
[2025-12-13 11:59:39] -rw------- 1 boincer umatlas   2652160 Dec 13 11:59 result.tar.gz
11:59:40 (21642): run_atlas exited; CPU time 117622.229527
11:59:40 (21642): called boinc_finish(0)

</stderr_txt>
]]>

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