Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:57:52 (1207600): wrapper (7.7.26015): starting
04:57:52 (1207600): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 04:57:52] Arguments: --nthreads 12
[2025-12-13 04:57:52] Threads: 12
[2025-12-13 04:57:52] Checking for CVMFS
[2025-12-13 04:57:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 04:57:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 04:57:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 04:57:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 04:57:53] 2.11.5.0 440617 52796 380608 153961 0 589 27576437 45568001 13655 130560 0 464368925 99.773 324820584 23825 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-12-13 04:57:53] CVMFS is ok
[2025-12-13 04:57:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 04:57:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 04:57:53] Further information can be found at the LHC@home message board.
[2025-12-13 04:57:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 04:57:53] Checking for apptainer binary...
[2025-12-13 04:57:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 04:57:53] Running /usr/bin/apptainer --version
[2025-12-13 04:57:53] apptainer version 1.4.1-1.el9
[2025-12-13 04:57:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 04:57:53] wns0091.triumf.lcg
[2025-12-13 04:57:53] apptainer works
[2025-12-13 04:57:53] Set ATHENA_PROC_NUMBER=12
[2025-12-13 04:57:53] Set ATHENA_CORE_NUMBER=12
[2025-12-13 04:57:53] Starting ATLAS job with PandaID=6929266133
[2025-12-13 04:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 05:01:12]  *** The last 200 lines of the pilot log: ***
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | found no stored workdir sizes
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | wrong length of table data, x=[1765630705.0], y=[1706.0] (must be same and length>=4)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . Timing measurements:
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . get job = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . initial setup = 2 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload setup = 4 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-in = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload execution = 15 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-out = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . log creation = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929266133/pilotlog.txt
[2025-12-13 05:01:12] 2025-12-13 13:00:39,718 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 05:01:12] - Log from pilotlog.txt -
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | found no stored workdir sizes
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | wrong length of table data, x=[1765630705.0], y=[1706.0] (must be same and length>=4)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . Timing measurements:
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . get job = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . initial setup = 2 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload setup = 4 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-in = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload execution = 15 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-out = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . log creation = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929266133/pilotlog.txt
[2025-12-13 05:01:12] 2025-12-13 13:00:39,718 | WARNING  | 
[2025-12-13 05:01:12] [begin log extracts]
[2025-12-13 05:01:12] - Log from pilotlog.txt -
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 05:01:12] 2025-12-13 13:00:39,707 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | found no stored workdir sizes
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | will not add max space = 0 B to job metrics
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | WARNING  | wrong length of table data, x=[1765630705.0], y=[1706.0] (must be same and length>=4)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | could have reported an average CPU frequency of 2571 MHz (4 samples)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . Timing measurements:
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . get job = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,708 | INFO     | . initial setup = 2 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload setup = 4 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-in = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . payload execution = 15 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . stage-out = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | . log creation = 0 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | ..............................
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 05:01:12] 2025-12-13 13:00:39,709 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929266133/pilotlog.txt
[2025-12-13 05:01:12] [end log extracts]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,718 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,719 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 05:01:12] 2025-12-13 13:00:39,851 | INFO     | 
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | job summary report
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | --------------------------------------------------
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | PanDA job id: 6929266133
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | task id: 47898763
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 04:58:32,144 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | pilot state: failed 
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | transexitcode: 65
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | exeerrorcode: 65
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,852 | INFO     | exitcode: 65
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | cpuconsumptiontime: 16 s
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | nevents: 0
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | neventsw: 0
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | pid: 1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | pgrp: 1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | corecount: 12
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | event service: False
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | sizes: {0: 2283948, 4: 2284210, 11: 2284238, 23: 2307483, 25: 2311803, 144: 2311941}
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | --------------------------------------------------
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | 
[2025-12-13 05:01:12] 2025-12-13 13:00:39,853 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,866 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | job 6929266133 has completed (purged errors)
[2025-12-13 05:01:12] 2025-12-13 13:00:39,867 | INFO     | overall cleanup function is called
[2025-12-13 05:01:12] 2025-12-13 13:00:40,872 | INFO     | --- collectZombieJob: --- 10, [1217843]
[2025-12-13 05:01:12] 2025-12-13 13:00:40,873 | INFO     | zombie collector waiting for pid 1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:40,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 05:01:12] 2025-12-13 13:00:40,873 | INFO     | collected zombie processes
[2025-12-13 05:01:12] 2025-12-13 13:00:40,873 | INFO     | will attempt to kill all subprocesses of pid=1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:41,076 | INFO     | process IDs to be killed: [1217843] (in reverse order)
[2025-12-13 05:01:12] 2025-12-13 13:00:41,157 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 05:01:12] 2025-12-13 13:00:41,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 05:01:12] 2025-12-13 13:00:41,166 | INFO     | did not find any defunct processes belonging to 1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:41,174 | INFO     | did not find any defunct processes belonging to 1217843
[2025-12-13 05:01:12] 2025-12-13 13:00:41,175 | INFO     | ready for new job
[2025-12-13 05:01:12] 2025-12-13 13:00:41,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 05:01:12] 2025-12-13 13:00:41,176 | INFO     | ***************************************
[2025-12-13 05:01:12] 2025-12-13 13:00:41,176 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 05:01:12] 2025-12-13 13:00:41,176 | INFO     | ***************************************
[2025-12-13 05:01:12] 2025-12-13 13:00:41,176 | INFO     | 
[2025-12-13 05:01:12] 2025-12-13 13:00:41,178 | INFO     | architecture information:
[2025-12-13 05:01:12] 2025-12-13 13:00:41,179 | INFO     | executing command: cat /etc/os-release
[2025-12-13 05:01:12] 2025-12-13 13:00:41,189 | INFO     | cat /etc/os-release:
[2025-12-13 05:01:12] NAME="CentOS Linux"
[2025-12-13 05:01:12] VERSION="7 (Core)"
[2025-12-13 05:01:12] ID="centos"
[2025-12-13 05:01:12] ID_LIKE="rhel fedora"
[2025-12-13 05:01:12] VERSION_ID="7"
[2025-12-13 05:01:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 05:01:12] ANSI_COLOR="0;31"
[2025-12-13 05:01:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 05:01:12] HOME_URL="https://www.centos.org/"
[2025-12-13 05:01:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 05:01:12] 
[2025-12-13 05:01:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 05:01:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 05:01:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 05:01:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 05:01:12] 
[2025-12-13 05:01:12] 2025-12-13 13:00:41,189 | INFO     | ***************************************
[2025-12-13 05:01:12] 2025-12-13 13:00:41,692 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | INFO     | sufficient remaining disk space (2131456163840 B)
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | INFO     | update_server=False
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 05:01:12] 2025-12-13 13:00:41,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 05:01:12] 2025-12-13 13:00:41,957 | INFO     | all data control threads have been joined
[2025-12-13 05:01:12] 2025-12-13 13:00:42,300 | INFO     | all job control threads have been joined
[2025-12-13 05:01:12] 2025-12-13 13:00:42,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 05:01:12] 2025-12-13 13:00:42,631 | INFO     | aborting loop
[2025-12-13 05:01:12] 2025-12-13 13:00:42,708 | INFO     | [job] retrieve thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:42,709 | INFO     | [job] queue monitor thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:42,726 | INFO     | [payload] validate_post thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:42,929 | INFO     | all payload control threads have been joined
[2025-12-13 05:01:12] 2025-12-13 13:00:42,958 | INFO     | [data] control thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,306 | INFO     | [job] control thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,320 | INFO     | [data] copytool_in thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,632 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,637 | INFO     | [job] job monitor thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,713 | INFO     | [data] copytool_out thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 05:01:12] 2025-12-13 13:00:43,873 | INFO     | [job] validate thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,918 | INFO     | [payload] failed_post thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:43,930 | INFO     | [payload] control thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:44,015 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:44,096 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:44,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:00:47,821 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 05:01:12] 2025-12-13 13:01:01,613 | INFO     | [monitor] cgroup control has ended
[2025-12-13 05:01:12] 2025-12-13 13:01:03,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396346132288)>', '<ExcThread(monitor, started 140395224753920)>']
[2025-12-13 05:01:12] 2025-12-13 13:01:08,525 | INFO     | all workflow threads have been joined
[2025-12-13 05:01:12] 2025-12-13 13:01:08,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 05:01:12] 2025-12-13 13:01:08,525 | INFO     | traces error code: 0
[2025-12-13 05:01:12] 2025-12-13 13:01:08,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 05:01:12] 2025-12-13 13:01:12,023 | INFO     | PID=1211248 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 05:01:12] 2025-12-13 13:01:12,024 | INFO     | .. there are 42 such processes running
[2025-12-13 05:01:12] 2025-12-13 13:01:12,025 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 05:01:12] 2025-12-13 13:01:12,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 05:01:12] 2025-12-13 13:01:12,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 05:01:12] 2025-12-13 13:01:12,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 05:01:12] 2025-12-13 13:01:12,026 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 05:01:12] 2025-12-13 13:01:12,026 | INFO     | [monitor] control thread has ended
[2025-12-13 05:01:12] 2025-12-13 13:01:12,157 [wrapper] ==== pilot stdout END ====
[2025-12-13 05:01:12] 2025-12-13 13:01:12,160 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 05:01:12] 2025-12-13 13:01:12,161 [wrapper] pilotpid: 1211248
[2025-12-13 05:01:12] 2025-12-13 13:01:12,163 [wrapper] Pilot exit status: 0
[2025-12-13 05:01:12] 2025-12-13 13:01:12,170 [wrapper] pandaids: 6929266133
[2025-12-13 05:01:12] 2025-12-13 13:01:12,219 [wrapper] cleanup supervisor_pilot 1211254 1211249
[2025-12-13 05:01:12] 2025-12-13 13:01:12,221 [wrapper] Test setup, not cleaning
[2025-12-13 05:01:12] 2025-12-13 13:01:12,222 [wrapper] apfmon messages muted
[2025-12-13 05:01:12] 2025-12-13 13:01:12,224 [wrapper] ==== wrapper stdout END ====
[2025-12-13 05:01:12] 2025-12-13 13:01:12,226 [wrapper] ==== wrapper stderr END ====
[2025-12-13 05:01:12]  *** Error codes and diagnostics ***
[2025-12-13 05:01:12]     "exeErrorCode": 65,
[2025-12-13 05:01:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 05:01:12]     "pilotErrorCode": 1305,
[2025-12-13 05:01:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 05:01:12]  *** Listing of results directory ***
[2025-12-13 05:01:12] total 221548
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc    579449 Dec 13 02:01 pilot3.tar.gz
[2025-12-13 05:01:12] -rwx------. 1 boinc boinc     36322 Dec 13 02:03 runpilot2-wrapper.sh
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc      5112 Dec 13 02:03 queuedata.json
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc       100 Dec 13 04:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 05:01:12] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 04:57 run_atlas
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc       105 Dec 13 04:57 job.xml
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc    592390 Dec 13 04:57 input.tar.gz
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc      6596 Dec 13 04:57 init_data.xml
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc 222750279 Dec 13 04:57 EVNT.47898761._000121.pool.root.1
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc     15847 Dec 13 04:57 start_atlas.sh
[2025-12-13 05:01:12] drwxrwx--x. 2 boinc boinc      4096 Dec 13 04:57 shared
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc         0 Dec 13 04:57 boinc_lockfile
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc      2504 Dec 13 04:57 pandaJob.out
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc    991736 Dec 13 04:57 agis_schedconf.cvmfs.json
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc   1516240 Dec 13 04:58 agis_ddmendpoints.agis.ALL.json
[2025-12-13 05:01:12] drwx------. 5 boinc boinc      4096 Dec 13 04:58 pilot3
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc       989 Dec 13 04:58 memory_monitor_summary.json
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc     21047 Dec 13 04:58 log.47898763._002392.job.log.tgz.1
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc      8414 Dec 13 05:00 heartbeat.json
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc       522 Dec 13 05:01 boinc_task_state.xml
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc      8192 Dec 13 05:01 boinc_mmap_file
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc        22 Dec 13 05:01 wrapper_checkpoint.txt
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc        95 Dec 13 05:01 pilot_heartbeat.json
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc       893 Dec 13 05:01 pilotlog.txt
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc     81456 Dec 13 05:01 log.47898763._002392.job.log.1
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc       188 Dec 13 05:01 output.list
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc       620 Dec 13 05:01 runtime_log
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc    122880 Dec 13 05:01 result.tar.gz
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc      8636 Dec 13 05:01 runtime_log.err
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc       645 Dec 13 05:01 knhKDmzdbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHpSKDm4Jojam.diag
[2025-12-13 05:01:12] -rw-r--r--. 1 boinc boinc     21614 Dec 13 05:01 stderr.txt
[2025-12-13 05:01:12] No HITS result produced
[2025-12-13 05:01:12]  *** Contents of shared directory: ***
[2025-12-13 05:01:12] total 218248
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc    592390 Dec 13 04:57 input.tar.gz
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc 222750279 Dec 13 04:57 ATLAS.root_0
[2025-12-13 05:01:12] -rw-r--r--. 2 boinc boinc     15847 Dec 13 04:57 start_atlas.sh
[2025-12-13 05:01:12] -rw-------. 1 boinc boinc    122880 Dec 13 05:01 result.tar.gz
05:01:13 (1207600): run_atlas exited; CPU time 21.013162
05:01:13 (1207600): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN