Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:48:04 (18808): wrapper (7.7.26015): starting
18:48:04 (18808): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 18:48:04] Arguments: --nthreads 8
[2025-12-13 18:48:04] Threads: 8
[2025-12-13 18:48:04] Checking for CVMFS
[2025-12-13 18:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 18:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 18:48:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 18:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 18:48:05] 2.11.2.0 16850 310120 140916 153968 2 237 23024416 25165825 3913 130560 11 146327107 99.877 85803931 2945 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 18:48:05] CVMFS is ok
[2025-12-13 18:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 18:48:05] Checking for apptainer binary...
[2025-12-13 18:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 18:48:05] Running /usr/bin/apptainer --version
[2025-12-13 18:48:05] apptainer version 1.3.2-1.el7
[2025-12-13 18:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 18:48:06] cg-vwn401.simple-grid.lan
[2025-12-13 18:48:06] apptainer works
[2025-12-13 18:48:07] Set ATHENA_PROC_NUMBER=8
[2025-12-13 18:48:07] Set ATHENA_CORE_NUMBER=8
[2025-12-13 18:48:07] Starting ATLAS job with PandaID=6929219295
[2025-12-13 18:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 23:22:08]  *** The last 200 lines of the pilot log: ***
[2025-12-13 23:22:08] 2025-12-13 22:20:57,830 | INFO     | time since job start (16347s) is within the limit (174528.0s)
[2025-12-13 23:22:08] 2025-12-13 22:20:58,505 | INFO     | monitor loop #1144: job 0:6929219295 is in state 'finished'
[2025-12-13 23:22:08] 2025-12-13 22:20:58,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 23:22:08] 2025-12-13 22:20:59,840 | INFO     | time since job start (16349s) is within the limit (174528.0s)
[2025-12-13 23:22:08] 2025-12-13 22:21:01,015 | INFO     | monitor loop #1145: job 0:6929219295 is in state 'finished'
[2025-12-13 23:22:08] 2025-12-13 22:21:01,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 23:22:08] 2025-12-13 22:21:01,849 | INFO     | time since job start (16351s) is within the limit (174528.0s)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,483 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 23:22:08] 2025-12-13 22:21:03,485 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 23:22:08] 2025-12-13 22:21:03,487 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6929219295/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,487 | INFO     | extracted standard info from prmon json
[2025-12-13 23:22:08] 2025-12-13 22:21:03,488 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 23:22:08] 2025-12-13 22:21:03,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 23:22:08] 2025-12-13 22:21:03,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 23:22:08] 2025-12-13 22:21:03,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 23:22:08] 2025-12-13 22:21:03,493 | INFO     | fitting pss+swap vs Time
[2025-12-13 23:22:08] 2025-12-13 22:21:03,494 | INFO     | sum of square deviations: 5770452380.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,497 | INFO     | sum of deviations: 17000438492.999998
[2025-12-13 23:22:08] 2025-12-13 22:21:03,497 | INFO     | mean x: 1765656244.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,497 | INFO     | mean y: 2482138.0528301885
[2025-12-13 23:22:08] 2025-12-13 22:21:03,497 | INFO     | intersect: -5199350993.772339
[2025-12-13 23:22:08] 2025-12-13 22:21:03,497 | INFO     | chi2: 1.6690636624183453
[2025-12-13 23:22:08] 2025-12-13 22:21:03,498 | INFO     | sum of square deviations: 5449944045.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,514 | INFO     | sum of deviations: 16447437350.499994
[2025-12-13 23:22:08] 2025-12-13 22:21:03,515 | INFO     | mean x: 1765656091.5
[2025-12-13 23:22:08] 2025-12-13 22:21:03,515 | INFO     | mean y: 2481876.0884615383
[2025-12-13 23:22:08] 2025-12-13 22:21:03,515 | INFO     | intersect: -5326108235.605967
[2025-12-13 23:22:08] 2025-12-13 22:21:03,515 | INFO     | chi2: 1.6694103907541502
[2025-12-13 23:22:08] 2025-12-13 22:21:03,515 | INFO     | current chi2=1.6694103907541502 (change=-0.020773823288596133 %)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,516 | INFO     | right removable region: 259
[2025-12-13 23:22:08] 2025-12-13 22:21:03,516 | INFO     | sum of square deviations: 5449944045.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,518 | INFO     | sum of deviations: -23930262728.99999
[2025-12-13 23:22:08] 2025-12-13 22:21:03,518 | INFO     | mean x: 1765656396.5
[2025-12-13 23:22:08] 2025-12-13 22:21:03,519 | INFO     | mean y: 2501446.2384615387
[2025-12-13 23:22:08] 2025-12-13 22:21:03,519 | INFO     | intersect: 7755355623.915504
[2025-12-13 23:22:08] 2025-12-13 22:21:03,519 | INFO     | chi2: 0.1647344126553144
[2025-12-13 23:22:08] 2025-12-13 22:21:03,519 | INFO     | current chi2=0.1647344126553144 (change=90.13013006246707 %)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,520 | INFO     | sum of square deviations: 5141528960.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,522 | INFO     | sum of deviations: -19368051440.000008
[2025-12-13 23:22:08] 2025-12-13 22:21:03,522 | INFO     | mean x: 1765656549.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,528 | INFO     | mean y: 2499168.9529411765
[2025-12-13 23:22:08] 2025-12-13 22:21:03,529 | INFO     | intersect: 6653697116.577628
[2025-12-13 23:22:08] 2025-12-13 22:21:03,529 | INFO     | chi2: 0.15003359489315615
[2025-12-13 23:22:08] 2025-12-13 22:21:03,529 | INFO     | current chi2=0.15003359489315615 (change=8.923950694453762 %)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,529 | INFO     | left removable region: 20
[2025-12-13 23:22:08] 2025-12-13 22:21:03,530 | INFO     | sum of square deviations: 4233158440.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,532 | INFO     | sum of deviations: -702907940.9999988
[2025-12-13 23:22:08] 2025-12-13 22:21:03,532 | INFO     | mean x: 1765656671.0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,532 | INFO     | mean y: 2489055.8451882843
[2025-12-13 23:22:08] 2025-12-13 22:21:03,532 | INFO     | intersect: 295673001.76088196
[2025-12-13 23:22:08] 2025-12-13 22:21:03,532 | INFO     | chi2: 0.06553749852936584
[2025-12-13 23:22:08] 2025-12-13 22:21:03,533 | INFO     | current memory leak: -0.17 B/s (using 239 data points, chi2=0.07)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,533 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,533 | INFO     | ..............................
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . Timing measurements:
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . get job = 0 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . initial setup = 2 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . payload setup = 32 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . stage-in = 0 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . payload execution = 16182 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . stage-out = 3 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | . log creation = 1 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,534 | INFO     | ..............................
[2025-12-13 23:22:08] 2025-12-13 22:21:03,678 | INFO     | 
[2025-12-13 23:22:08] 2025-12-13 22:21:03,678 | INFO     | job summary report
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | --------------------------------------------------
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | PanDA job id: 6929219295
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | task id: 47886933
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | errors: (none)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | pilot state: finished 
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | transexitcode: 0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | exeerrorcode: 0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | exeerrordiag: 
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | exitcode: 0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,679 | INFO     | exitmsg: OK
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | cpuconsumptiontime: 60446 s
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | nevents: 400
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | neventsw: 0
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | pid: 2032
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | pgrp: 2032
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | corecount: 8
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | event service: False
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | sizes: {0: 2283792, 1: 2283991, 8: 2284253, 12: 2284281, 16218: 2315298, 16222: 2324298, 16226: 2324482, 16326: 2324676}
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | --------------------------------------------------
[2025-12-13 23:22:08] 2025-12-13 22:21:03,680 | INFO     | 
[2025-12-13 23:22:08] 2025-12-13 22:21:03,681 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-13 23:22:08] 2025-12-13 22:21:03,863 | INFO     | time since job start (16353s) is within the limit (174528.0s)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,878 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | job 6929219295 has completed (purged errors)
[2025-12-13 23:22:08] 2025-12-13 22:21:03,880 | INFO     | overall cleanup function is called
[2025-12-13 23:22:08] 2025-12-13 22:21:04,889 | INFO     | --- collectZombieJob: --- 10, [2032]
[2025-12-13 23:22:08] 2025-12-13 22:21:04,889 | INFO     | zombie collector waiting for pid 2032
[2025-12-13 23:22:08] 2025-12-13 22:21:04,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 23:22:08] 2025-12-13 22:21:04,890 | INFO     | collected zombie processes
[2025-12-13 23:22:08] 2025-12-13 22:21:04,890 | INFO     | will attempt to kill all subprocesses of pid=2032
[2025-12-13 23:22:08] 2025-12-13 22:21:05,015 | INFO     | process IDs to be killed: [2032] (in reverse order)
[2025-12-13 23:22:08] 2025-12-13 22:21:05,358 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 23:22:08] 2025-12-13 22:21:05,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 23:22:08] 2025-12-13 22:21:05,361 | INFO     | did not find any defunct processes belonging to 2032
[2025-12-13 23:22:08] 2025-12-13 22:21:05,365 | INFO     | did not find any defunct processes belonging to 2032
[2025-12-13 23:22:08] 2025-12-13 22:21:05,365 | INFO     | ready for new job
[2025-12-13 23:22:08] 2025-12-13 22:21:05,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 23:22:08] 2025-12-13 22:21:05,367 | INFO     | ***************************************
[2025-12-13 23:22:08] 2025-12-13 22:21:05,367 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 23:22:08] 2025-12-13 22:21:05,367 | INFO     | ***************************************
[2025-12-13 23:22:08] 2025-12-13 22:21:05,368 | INFO     | 
[2025-12-13 23:22:08] 2025-12-13 22:21:05,368 | INFO     | pilot is running in a VM
[2025-12-13 23:22:08] 2025-12-13 22:21:05,368 | INFO     | architecture information:
[2025-12-13 23:22:08] 2025-12-13 22:21:05,384 | INFO     | executing command: cat /etc/os-release
[2025-12-13 23:22:08] 2025-12-13 22:21:05,641 | INFO     | cat /etc/os-release:
[2025-12-13 23:22:08] NAME="CentOS Linux"
[2025-12-13 23:22:08] VERSION="7 (Core)"
[2025-12-13 23:22:08] ID="centos"
[2025-12-13 23:22:08] ID_LIKE="rhel fedora"
[2025-12-13 23:22:08] VERSION_ID="7"
[2025-12-13 23:22:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 23:22:08] ANSI_COLOR="0;31"
[2025-12-13 23:22:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 23:22:08] HOME_URL="https://www.centos.org/"
[2025-12-13 23:22:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 23:22:08] 
[2025-12-13 23:22:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 23:22:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 23:22:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 23:22:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 23:22:08] 
[2025-12-13 23:22:08] 2025-12-13 22:21:05,641 | INFO     | ***************************************
[2025-12-13 23:22:08] 2025-12-13 22:21:06,144 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-13 23:22:08] 2025-12-13 22:21:06,419 | INFO     | sufficient remaining disk space (496574136320 B)
[2025-12-13 23:22:08] 2025-12-13 22:21:06,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 23:22:08] 2025-12-13 22:21:06,420 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 23:22:08] 2025-12-13 22:21:06,420 | INFO     | update_server=False
[2025-12-13 23:22:08] 2025-12-13 22:21:06,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 23:22:08] 2025-12-13 22:21:06,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 23:22:08] 2025-12-13 22:21:07,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:22:08] 2025-12-13 22:21:07,065 | INFO     | aborting loop
[2025-12-13 23:22:08] 2025-12-13 22:21:07,083 | INFO     | all data control threads have been joined
[2025-12-13 23:22:08] 2025-12-13 22:21:07,425 | INFO     | [job] retrieve thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:07,534 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:07,690 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:07,923 | INFO     | all payload control threads have been joined
[2025-12-13 23:22:08] 2025-12-13 22:21:07,976 | INFO     | all job control threads have been joined
[2025-12-13 23:22:08] 2025-12-13 22:21:07,984 | INFO     | [payload] failed_post thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,071 | INFO     | [job] job monitor thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,089 | INFO     | [data] control thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,229 | INFO     | [data] copytool_in thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,432 | INFO     | [data] copytool_out thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 23:22:08] 2025-12-13 22:21:08,619 | INFO     | [job] validate thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,685 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 23:22:08] 2025-12-13 22:21:08,929 | INFO     | [payload] control thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,977 | INFO     | [payload] validate_post thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:08,982 | INFO     | [job] control thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:09,695 | INFO     | [job] queue monitor thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:12,564 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 23:22:08] 2025-12-13 22:21:37,028 | INFO     | PID=22552 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 23:22:08] 2025-12-13 22:21:37,028 | INFO     | .. there are 9 such processes running
[2025-12-13 23:22:08] 2025-12-13 22:21:37,029 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 23:22:08] 2025-12-13 22:21:37,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 23:22:08] 2025-12-13 22:21:37,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 23:22:08] 2025-12-13 22:21:57,813 | INFO     | [monitor] cgroup control has ended
[2025-12-13 23:22:08] 2025-12-13 22:21:58,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140368089626432)>', '<ExcThread(monitor, started 140367508793088)>']
[2025-12-13 23:22:08] 2025-12-13 22:21:59,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 23:22:08] 2025-12-13 22:21:59,158 | INFO     | [monitor] control thread has ended
[2025-12-13 23:22:08] 2025-12-13 22:22:03,977 | INFO     | all workflow threads have been joined
[2025-12-13 23:22:08] 2025-12-13 22:22:03,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 23:22:08] 2025-12-13 22:22:03,978 | INFO     | traces error code: 0
[2025-12-13 23:22:08] 2025-12-13 22:22:03,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 23:22:08] 2025-12-13 22:22:04,341 [wrapper] ==== pilot stdout END ====
[2025-12-13 23:22:08] 2025-12-13 22:22:04,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 23:22:08] 2025-12-13 22:22:04,464 [wrapper] pilotpid: 22552
[2025-12-13 23:22:08] 2025-12-13 22:22:04,556 [wrapper] Pilot exit status: 0
[2025-12-13 23:22:08] 2025-12-13 22:22:04,874 [wrapper] pandaids: 6929219295
[2025-12-13 23:22:08] 2025-12-13 22:22:05,712 [wrapper] cleanup supervisor_pilot 27354 22553
[2025-12-13 23:22:08] 2025-12-13 22:22:05,764 [wrapper] Test setup, not cleaning
[2025-12-13 23:22:08] 2025-12-13 22:22:05,805 [wrapper] apfmon messages muted
[2025-12-13 23:22:08] 2025-12-13 22:22:05,880 [wrapper] ==== wrapper stdout END ====
[2025-12-13 23:22:08] 2025-12-13 22:22:05,969 [wrapper] ==== wrapper stderr END ====
[2025-12-13 23:22:08]  *** Error codes and diagnostics ***
[2025-12-13 23:22:08]     "exeErrorCode": 0,
[2025-12-13 23:22:08]     "exeErrorDiag": "",
[2025-12-13 23:22:08]     "pilotErrorCode": 0,
[2025-12-13 23:22:08]     "pilotErrorDiag": "",
[2025-12-13 23:22:08]  *** Listing of results directory ***
[2025-12-13 23:22:08] total 342584
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc    579449 Dec 13 09:48 pilot3.tar.gz
[2025-12-13 23:22:08] -rwx------. 1 boinc boinc     36322 Dec 13 09:48 runpilot2-wrapper.sh
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc      5112 Dec 13 09:48 queuedata.json
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc       100 Dec 13 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 23:22:08] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 18:48 run_atlas
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc       105 Dec 13 18:48 job.xml
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc      6393 Dec 13 18:48 init_data.xml
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc 188629752 Dec 13 18:48 EVNT.47886929._000062.pool.root.1
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc     15847 Dec 13 18:48 start_atlas.sh
[2025-12-13 23:22:08] drwxrwx--x. 2 boinc boinc        68 Dec 13 18:48 shared
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc    592393 Dec 13 18:48 input.tar.gz
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc         0 Dec 13 18:48 boinc_lockfile
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc      2511 Dec 13 18:48 pandaJob.out
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc    991736 Dec 13 18:48 agis_schedconf.cvmfs.json
[2025-12-13 23:22:08] drwx------. 5 boinc boinc      4096 Dec 13 18:48 pilot3
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc 152902927 Dec 13 23:18 HITS.47886933._001550.pool.root.1
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc       531 Dec 13 23:18 boinc_task_state.xml
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc      1029 Dec 13 23:19 memory_monitor_summary.json
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc   1516240 Dec 13 23:19 agis_ddmendpoints.agis.ALL.json
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc    492880 Dec 13 23:19 log.47886933._001550.job.log.tgz.1
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc      7773 Dec 13 23:21 heartbeat.json
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc        95 Dec 13 23:21 pilot_heartbeat.json
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc      8192 Dec 13 23:21 boinc_mmap_file
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc        28 Dec 13 23:21 wrapper_checkpoint.txt
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc      4885 Dec 13 23:22 pilotlog.txt
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc   2193865 Dec 13 23:22 log.47886933._001550.job.log.1
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc       357 Dec 13 23:22 output.list
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc       620 Dec 13 23:22 runtime_log
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc   2703360 Dec 13 23:22 result.tar.gz
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc      8833 Dec 13 23:22 runtime_log.err
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc       656 Dec 13 23:22 OsvLDmhTao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLAOKDmeFL0xm.diag
[2025-12-13 23:22:08] -rw-r--r--. 1 boinc boinc     20976 Dec 13 23:22 stderr.txt
[2025-12-13 23:22:08] HITS file was successfully produced:
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc 152902927 Dec 13 23:18 shared/HITS.pool.root.1
[2025-12-13 23:22:08]  *** Contents of shared directory: ***
[2025-12-13 23:22:08] total 336768
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc 188629752 Dec 13 18:48 ATLAS.root_0
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc     15847 Dec 13 18:48 start_atlas.sh
[2025-12-13 23:22:08] -rw-r--r--. 2 boinc boinc    592393 Dec 13 18:48 input.tar.gz
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc 152902927 Dec 13 23:18 HITS.pool.root.1
[2025-12-13 23:22:08] -rw-------. 1 boinc boinc   2703360 Dec 13 23:22 result.tar.gz
23:22:09 (18808): run_atlas exited; CPU time 60669.118075
23:22:09 (18808): called boinc_finish(0)

</stderr_txt>
]]>

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