Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:37 (640821): wrapper (7.7.26015): starting
06:37:37 (640821): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 06:37:37] Arguments: --nthreads 8
[2025-12-13 06:37:37] Threads: 8
[2025-12-13 06:37:37] Checking for CVMFS
[2025-12-13 06:37:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:37:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:37:38] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:37:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:37:39] 2.13.3.0 13172 54480 391248 153959 3 535 20729741 32935937 36232 16776704 0 279943589 99.466 367963216 34247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 06:37:39] CVMFS is ok
[2025-12-13 06:37:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:37:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 06:37:39] Further information can be found at the LHC@home message board.
[2025-12-13 06:37:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:37:39] Checking for apptainer binary...
[2025-12-13 06:37:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 06:37:39] Running /usr/bin/apptainer --version
[2025-12-13 06:37:39] apptainer version 1.4.5-2.el9
[2025-12-13 06:37:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:37:40] c6-6-8-3.aglt2.org
[2025-12-13 06:37:40] apptainer works
[2025-12-13 06:37:40] Set ATHENA_PROC_NUMBER=8
[2025-12-13 06:37:40] Set ATHENA_CORE_NUMBER=8
[2025-12-13 06:37:40] Starting ATLAS job with PandaID=6929263152
[2025-12-13 06:37:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 10:43:17]  *** The last 200 lines of the pilot log: ***
[2025-12-13 10:43:17] 2025-12-13 15:42:19,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 10:43:17] 2025-12-13 15:42:19,452 | INFO     | time since job start (14617s) is within the limit (174528.0s)
[2025-12-13 10:43:17] 2025-12-13 15:42:19,871 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 10:43:17] 2025-12-13 15:42:19,941 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2700.9395000000004
[2025-12-13 10:43:17] 2025-12-13 15:42:20,052 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6929263152/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,053 | INFO     | extracted standard info from prmon json
[2025-12-13 10:43:17] 2025-12-13 15:42:20,054 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 10:43:17] 2025-12-13 15:42:20,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 10:43:17] 2025-12-13 15:42:20,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 10:43:17] 2025-12-13 15:42:20,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 10:43:17] 2025-12-13 15:42:20,090 | INFO     | fitting pss+swap vs Time
[2025-12-13 10:43:17] 2025-12-13 15:42:20,091 | INFO     | sum of square deviations: 4127672642.5569477
[2025-12-13 10:43:17] 2025-12-13 15:42:20,093 | INFO     | sum of deviations: 40805717733.012665
[2025-12-13 10:43:17] 2025-12-13 15:42:20,093 | INFO     | mean x: 1765633255.177215
[2025-12-13 10:43:17] 2025-12-13 15:42:20,093 | INFO     | mean y: 2470257.594936709
[2025-12-13 10:43:17] 2025-12-13 15:42:20,093 | INFO     | intersect: -17452385897.410275
[2025-12-13 10:43:17] 2025-12-13 15:42:20,112 | INFO     | chi2: 3.925867974618315
[2025-12-13 10:43:17] 2025-12-13 15:42:20,112 | INFO     | sum of square deviations: 3871889454.754317
[2025-12-13 10:43:17] 2025-12-13 15:42:20,114 | INFO     | sum of deviations: 70082506314.49568
[2025-12-13 10:43:17] 2025-12-13 15:42:20,114 | INFO     | mean x: 1765633102.6767242
[2025-12-13 10:43:17] 2025-12-13 15:42:20,115 | INFO     | mean y: 2487480.0732758623
[2025-12-13 10:43:17] 2025-12-13 15:42:20,115 | INFO     | intersect: -31956067771.415897
[2025-12-13 10:43:17] 2025-12-13 15:42:20,156 | INFO     | chi2: 2.4861175370385804
[2025-12-13 10:43:17] 2025-12-13 15:42:20,156 | INFO     | current chi2=2.4861175370385804 (change=36.67342984756668 %)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,156 | INFO     | sum of square deviations: 3626911319.5946918
[2025-12-13 10:43:17] 2025-12-13 15:42:20,158 | INFO     | sum of deviations: 68383206963.303986
[2025-12-13 10:43:17] 2025-12-13 15:42:20,158 | INFO     | mean x: 1765632950.1806169
[2025-12-13 10:43:17] 2025-12-13 15:42:20,158 | INFO     | mean y: 2486422.114537445
[2025-12-13 10:43:17] 2025-12-13 15:42:20,158 | INFO     | intersect: -33287448956.54336
[2025-12-13 10:43:17] 2025-12-13 15:42:20,159 | INFO     | chi2: 2.4872278985540612
[2025-12-13 10:43:17] 2025-12-13 15:42:20,159 | INFO     | current chi2=2.4872278985540612 (change=-0.04466247065709822 %)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,159 | INFO     | right removable region: 226
[2025-12-13 10:43:17] 2025-12-13 15:42:20,200 | INFO     | sum of square deviations: 3871878292.396548
[2025-12-13 10:43:17] 2025-12-13 15:42:20,212 | INFO     | sum of deviations: -15091852134.55172
[2025-12-13 10:43:17] 2025-12-13 15:42:20,212 | INFO     | mean x: 1765633407.6810346
[2025-12-13 10:43:17] 2025-12-13 15:42:20,212 | INFO     | mean y: 2503417.4655172415
[2025-12-13 10:43:17] 2025-12-13 15:42:20,212 | INFO     | intersect: 6884609801.045449
[2025-12-13 10:43:17] 2025-12-13 15:42:20,213 | INFO     | chi2: 1.5764753878353464
[2025-12-13 10:43:17] 2025-12-13 15:42:20,213 | INFO     | current chi2=1.5764753878353464 (change=59.84390208668145 %)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,213 | INFO     | sum of square deviations: 3626903266.9515524
[2025-12-13 10:43:17] 2025-12-13 15:42:20,215 | INFO     | sum of deviations: -22200043560.01762
[2025-12-13 10:43:17] 2025-12-13 15:42:20,215 | INFO     | mean x: 1765633560.1762114
[2025-12-13 10:43:17] 2025-12-13 15:42:20,233 | INFO     | mean y: 2507792.700440529
[2025-12-13 10:43:17] 2025-12-13 15:42:20,234 | INFO     | intersect: 10809838196.052076
[2025-12-13 10:43:17] 2025-12-13 15:42:20,234 | INFO     | chi2: 1.514944299594648
[2025-12-13 10:43:17] 2025-12-13 15:42:20,234 | INFO     | current chi2=1.514944299594648 (change=3.903079535240094 %)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,234 | INFO     | left removable region: 20
[2025-12-13 10:43:17] 2025-12-13 15:42:20,235 | INFO     | sum of square deviations: 2710585751.8883443
[2025-12-13 10:43:17] 2025-12-13 15:42:20,243 | INFO     | sum of deviations: 11043640140.009705
[2025-12-13 10:43:17] 2025-12-13 15:42:20,243 | INFO     | mean x: 1765633529.6650486
[2025-12-13 10:43:17] 2025-12-13 15:42:20,243 | INFO     | mean y: 2523252.0291262134
[2025-12-13 10:43:17] 2025-12-13 15:42:20,243 | INFO     | intersect: -7191132697.4909525
[2025-12-13 10:43:17] 2025-12-13 15:42:20,244 | INFO     | chi2: 0.014136654760762422
[2025-12-13 10:43:17] 2025-12-13 15:42:20,244 | INFO     | current memory leak: 4.07 B/s (using 206 data points, chi2=0.01)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,245 | INFO     | could have reported an average CPU frequency of 2727 MHz (11 samples)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,245 | INFO     | ..............................
[2025-12-13 10:43:17] 2025-12-13 15:42:20,245 | INFO     | . Timing measurements:
[2025-12-13 10:43:17] 2025-12-13 15:42:20,245 | INFO     | . get job = 0 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,245 | INFO     | . initial setup = 4 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | . payload setup = 41 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | . stage-in = 0 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | . payload execution = 14463 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | . stage-out = 6 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | . log creation = 0 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,268 | INFO     | ..............................
[2025-12-13 10:43:17] 2025-12-13 15:42:20,984 | INFO     | 
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | job summary report
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | --------------------------------------------------
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | PanDA job id: 6929263152
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | task id: 47898763
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | errors: (none)
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | pilot state: finished 
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | transexitcode: 0
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | exeerrorcode: 0
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | exeerrordiag: 
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | exitcode: 0
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | exitmsg: OK
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | cpuconsumptiontime: 60070 s
[2025-12-13 10:43:17] 2025-12-13 15:42:20,985 | INFO     | nevents: 400
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | neventsw: 0
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | pid: 673241
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | pgrp: 673241
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | corecount: 8
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | event service: False
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | sizes: {0: 2283123, 1: 2283808, 2: 2283836, 3: 2284035, 4: 2284035, 15: 2284063, 26: 2284219, 32: 2284509, 37: 2284537, 14510: 2315175, 14518: 2324173, 14521: 2324
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | --------------------------------------------------
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | 
[2025-12-13 10:43:17] 2025-12-13 15:42:20,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-13 10:43:17] 2025-12-13 15:42:21,072 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | job 6929263152 has completed (purged errors)
[2025-12-13 10:43:17] 2025-12-13 15:42:21,074 | INFO     | overall cleanup function is called
[2025-12-13 10:43:17] 2025-12-13 15:42:22,127 | INFO     | --- collectZombieJob: --- 10, [673241]
[2025-12-13 10:43:17] 2025-12-13 15:42:22,128 | INFO     | zombie collector waiting for pid 673241
[2025-12-13 10:43:17] 2025-12-13 15:42:22,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 10:43:17] 2025-12-13 15:42:22,128 | INFO     | collected zombie processes
[2025-12-13 10:43:17] 2025-12-13 15:42:22,128 | INFO     | will attempt to kill all subprocesses of pid=673241
[2025-12-13 10:43:17] 2025-12-13 15:42:27,795 | INFO     | process IDs to be killed: [673241] (in reverse order)
[2025-12-13 10:43:17] 2025-12-13 15:42:28,261 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 10:43:17] 2025-12-13 15:42:28,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 10:43:17] 2025-12-13 15:42:28,410 | INFO     | did not find any defunct processes belonging to 673241
[2025-12-13 10:43:17] 2025-12-13 15:42:28,521 | INFO     | did not find any defunct processes belonging to 673241
[2025-12-13 10:43:17] 2025-12-13 15:42:28,522 | INFO     | ready for new job
[2025-12-13 10:43:17] 2025-12-13 15:42:28,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 10:43:17] 2025-12-13 15:42:28,546 | INFO     | ***************************************
[2025-12-13 10:43:17] 2025-12-13 15:42:28,546 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 10:43:17] 2025-12-13 15:42:28,546 | INFO     | ***************************************
[2025-12-13 10:43:17] 2025-12-13 15:42:28,546 | INFO     | 
[2025-12-13 10:43:17] 2025-12-13 15:42:28,568 | INFO     | architecture information:
[2025-12-13 10:43:17] 2025-12-13 15:42:28,585 | INFO     | executing command: cat /etc/os-release
[2025-12-13 10:43:17] 2025-12-13 15:42:28,728 | INFO     | cat /etc/os-release:
[2025-12-13 10:43:17] NAME="CentOS Linux"
[2025-12-13 10:43:17] VERSION="7 (Core)"
[2025-12-13 10:43:17] ID="centos"
[2025-12-13 10:43:17] ID_LIKE="rhel fedora"
[2025-12-13 10:43:17] VERSION_ID="7"
[2025-12-13 10:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 10:43:17] ANSI_COLOR="0;31"
[2025-12-13 10:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 10:43:17] HOME_URL="https://www.centos.org/"
[2025-12-13 10:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 10:43:17] 
[2025-12-13 10:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 10:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 10:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 10:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 10:43:17] 
[2025-12-13 10:43:17] 2025-12-13 15:42:28,729 | INFO     | ***************************************
[2025-12-13 10:43:17] 2025-12-13 15:42:29,232 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-13 10:43:17] 2025-12-13 15:42:29,404 | INFO     | sufficient remaining disk space (94806999040 B)
[2025-12-13 10:43:17] 2025-12-13 15:42:29,404 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 10:43:17] 2025-12-13 15:42:29,404 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 10:43:17] 2025-12-13 15:42:29,404 | INFO     | update_server=False
[2025-12-13 10:43:17] 2025-12-13 15:42:29,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 10:43:17] 2025-12-13 15:42:29,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 10:43:17] 2025-12-13 15:42:29,629 | INFO     | all payload control threads have been joined
[2025-12-13 10:43:17] 2025-12-13 15:42:29,723 | INFO     | all data control threads have been joined
[2025-12-13 10:43:17] 2025-12-13 15:42:30,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:43:17] 2025-12-13 15:42:30,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 10:43:17] 2025-12-13 15:42:30,359 | INFO     | aborting loop
[2025-12-13 10:43:17] 2025-12-13 15:42:30,415 | INFO     | [job] retrieve thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:30,552 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:30,635 | INFO     | [payload] control thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:30,653 | INFO     | [data] copytool_in thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:30,729 | INFO     | [data] control thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:30,892 | INFO     | all job control threads have been joined
[2025-12-13 10:43:17] 2025-12-13 15:42:30,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 10:43:17] 2025-12-13 15:42:31,086 | INFO     | [job] queue monitor thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,284 | INFO     | [job] validate thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,285 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,364 | INFO     | [job] job monitor thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,387 | INFO     | [payload] validate_post thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,506 | INFO     | [payload] failed_post thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,541 | INFO     | [data] copytool_out thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,542 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:31,898 | INFO     | [job] control thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:42:34,959 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 10:43:17] 2025-12-13 15:43:00,949 | INFO     | PID=648958 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 10:43:17] 2025-12-13 15:43:00,949 | INFO     | .. there are 44 such processes running
[2025-12-13 10:43:17] 2025-12-13 15:43:00,950 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 10:43:17] 2025-12-13 15:43:00,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 10:43:17] 2025-12-13 15:43:00,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 10:43:17] 2025-12-13 15:43:08,424 | INFO     | [monitor] cgroup control has ended
[2025-12-13 10:43:17] 2025-12-13 15:43:09,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306974484288)>', '<ExcThread(monitor, started 140306045466368)>']
[2025-12-13 10:43:17] 2025-12-13 15:43:10,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 10:43:17] 2025-12-13 15:43:10,024 | INFO     | [monitor] control thread has ended
[2025-12-13 10:43:17] 2025-12-13 15:43:14,246 | INFO     | all workflow threads have been joined
[2025-12-13 10:43:17] 2025-12-13 15:43:14,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 10:43:17] 2025-12-13 15:43:14,247 | INFO     | traces error code: 0
[2025-12-13 10:43:17] 2025-12-13 15:43:14,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 10:43:17] 2025-12-13 15:43:15,340 [wrapper] ==== pilot stdout END ====
[2025-12-13 10:43:17] 2025-12-13 15:43:15,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 10:43:17] 2025-12-13 15:43:15,361 [wrapper] pilotpid: 648958
[2025-12-13 10:43:17] 2025-12-13 15:43:15,371 [wrapper] Pilot exit status: 0
[2025-12-13 10:43:17] 2025-12-13 15:43:15,503 [wrapper] pandaids: 6929263152
[2025-12-13 10:43:17] 2025-12-13 15:43:16,589 [wrapper] cleanup supervisor_pilot 1512057 648959
[2025-12-13 10:43:17] 2025-12-13 15:43:16,602 [wrapper] Test setup, not cleaning
[2025-12-13 10:43:17] 2025-12-13 15:43:16,616 [wrapper] apfmon messages muted
[2025-12-13 10:43:17] 2025-12-13 15:43:16,631 [wrapper] ==== wrapper stdout END ====
[2025-12-13 10:43:17] 2025-12-13 15:43:16,665 [wrapper] ==== wrapper stderr END ====
[2025-12-13 10:43:17]  *** Error codes and diagnostics ***
[2025-12-13 10:43:17]     "exeErrorCode": 0,
[2025-12-13 10:43:17]     "exeErrorDiag": "",
[2025-12-13 10:43:17]     "pilotErrorCode": 0,
[2025-12-13 10:43:17]     "pilotErrorDiag": "",
[2025-12-13 10:43:17]  *** Listing of results directory ***
[2025-12-13 10:43:17] total 444000
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 10:43:17] -rwx------. 1 boincer umatlas     36322 Dec 13 04:38 runpilot2-wrapper.sh
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 04:38 queuedata.json
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas       100 Dec 13 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 10:43:17] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 06:37 run_atlas
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas       105 Dec 13 06:37 job.xml
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas 222956385 Dec 13 06:37 EVNT.47898761._000049.pool.root.1
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 06:37 start_atlas.sh
[2025-12-13 10:43:17] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 06:37 shared
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas    592388 Dec 13 06:37 input.tar.gz
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas         0 Dec 13 06:37 boinc_lockfile
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas      2504 Dec 13 06:37 pandaJob.out
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas        57 Dec 13 06:37 setup.sh.local
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas    991728 Dec 13 06:38 agis_schedconf.cvmfs.json
[2025-12-13 10:43:17] drwx------. 5 boincer umatlas      4096 Dec 13 06:38 pilot3
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas 223513108 Dec 13 10:39 HITS.47898763._001219.pool.root.1
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas       531 Dec 13 10:39 boinc_task_state.xml
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas      6878 Dec 13 10:39 init_data.xml
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas      1039 Dec 13 10:41 memory_monitor_summary.json
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas   1516240 Dec 13 10:41 agis_ddmendpoints.agis.ALL.json
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas    451405 Dec 13 10:41 log.47898763._001219.job.log.tgz.1
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas      7822 Dec 13 10:42 heartbeat.json
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 10:42 boinc_mmap_file
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas        28 Dec 13 10:42 wrapper_checkpoint.txt
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas        95 Dec 13 10:43 pilot_heartbeat.json
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas      4823 Dec 13 10:43 pilotlog.txt
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas   1682169 Dec 13 10:43 log.47898763._001219.job.log.1
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas       357 Dec 13 10:43 output.list
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas       620 Dec 13 10:43 runtime_log
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas   2150400 Dec 13 10:43 result.tar.gz
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 10:43 runtime_log.err
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas       655 Dec 13 10:43 KX3MDmBGbo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmReSKDm59yl8n.diag
[2025-12-13 10:43:17] -rw-r--r--. 1 boincer umatlas     21242 Dec 13 10:43 stderr.txt
[2025-12-13 10:43:17] HITS file was successfully produced:
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas 223513108 Dec 13 10:39 shared/HITS.pool.root.1
[2025-12-13 10:43:17]  *** Contents of shared directory: ***
[2025-12-13 10:43:17] total 438712
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas 222956385 Dec 13 06:37 ATLAS.root_0
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 06:37 start_atlas.sh
[2025-12-13 10:43:17] -rw-r--r--. 2 boincer umatlas    592388 Dec 13 06:37 input.tar.gz
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas 223513108 Dec 13 10:39 HITS.pool.root.1
[2025-12-13 10:43:17] -rw-------. 1 boincer umatlas   2150400 Dec 13 10:43 result.tar.gz
10:43:18 (640821): run_atlas exited; CPU time 60802.007459
10:43:18 (640821): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN