Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:30:29 (10240): wrapper (7.7.26015): starting
06:30:29 (10240): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 06:30:29] Arguments: --nthreads 8
[2025-12-13 06:30:29] Threads: 8
[2025-12-13 06:30:29] Checking for CVMFS
[2025-12-13 06:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:30:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:30:30] 2.11.2.0 2797 90136 82644 153959 3 58 12504733 20275200 1 130560 0 22676828 99.849 5196191 31789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 06:30:30] CVMFS is ok
[2025-12-13 06:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 06:30:30] Further information can be found at the LHC@home message board.
[2025-12-13 06:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:30:30] Checking for apptainer binary...
[2025-12-13 06:30:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 06:30:30] Running /usr/bin/apptainer --version
[2025-12-13 06:30:30] apptainer version 1.3.2-1.el7
[2025-12-13 06:30:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:30:32] c-204-11.aglt2.org
[2025-12-13 06:30:32] apptainer works
[2025-12-13 06:30:32] Set ATHENA_PROC_NUMBER=8
[2025-12-13 06:30:32] Set ATHENA_CORE_NUMBER=8
[2025-12-13 06:30:32] Starting ATLAS job with PandaID=6929186049
[2025-12-13 06:30:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 09:35:13]  *** The last 200 lines of the pilot log: ***
[2025-12-13 09:35:13] 2025-12-13 14:34:12,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 09:35:13] 2025-12-13 14:34:12,452 | INFO     | time since job start (11003s) is within the limit (174528.0s)
[2025-12-13 09:35:13] 2025-12-13 14:34:14,458 | INFO     | time since job start (11005s) is within the limit (174528.0s)
[2025-12-13 09:35:13] 2025-12-13 14:34:14,862 | INFO     | monitor loop #809: job 0:6929186049 is in state 'finished'
[2025-12-13 09:35:13] 2025-12-13 14:34:14,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 09:35:13] 2025-12-13 14:34:15,578 | INFO     | PID=13914 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 09:35:13] 2025-12-13 14:34:16,578 | INFO     | time since job start (11007s) is within the limit (174528.0s)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,369 | INFO     | monitor loop #810: job 0:6929186049 is in state 'finished'
[2025-12-13 09:35:13] 2025-12-13 14:34:17,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,402 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 09:35:13] 2025-12-13 14:34:17,406 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-13 09:35:13] 2025-12-13 14:34:17,408 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929186049/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,408 | INFO     | extracted standard info from prmon json
[2025-12-13 09:35:13] 2025-12-13 14:34:17,409 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 09:35:13] 2025-12-13 14:34:17,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 09:35:13] 2025-12-13 14:34:17,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 09:35:13] 2025-12-13 14:34:17,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 09:35:13] 2025-12-13 14:34:17,414 | INFO     | fitting pss+swap vs Time
[2025-12-13 09:35:13] 2025-12-13 14:34:17,415 | INFO     | sum of square deviations: 1808350185.0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,416 | INFO     | sum of deviations: -1656518653.500006
[2025-12-13 09:35:13] 2025-12-13 14:34:17,416 | INFO     | mean x: 1765630939.5
[2025-12-13 09:35:13] 2025-12-13 14:34:17,416 | INFO     | mean y: 2522514.683333333
[2025-12-13 09:35:13] 2025-12-13 14:34:17,416 | INFO     | intersect: 1619908688.4118972
[2025-12-13 09:35:13] 2025-12-13 14:34:17,416 | INFO     | chi2: 1.6052309719041675
[2025-12-13 09:35:13] 2025-12-13 14:34:17,417 | INFO     | sum of square deviations: 1661798600.0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,418 | INFO     | sum of deviations: -1510507254.000001
[2025-12-13 09:35:13] 2025-12-13 14:34:17,418 | INFO     | mean x: 1765630787.0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,418 | INFO     | mean y: 2522666.6628571427
[2025-12-13 09:35:13] 2025-12-13 14:34:17,418 | INFO     | intersect: 1607409150.2892308
[2025-12-13 09:35:13] 2025-12-13 14:34:17,418 | INFO     | chi2: 1.605260838625035
[2025-12-13 09:35:13] 2025-12-13 14:34:17,419 | INFO     | current chi2=1.605260838625035 (change=-0.0018605871298476542 %)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,419 | INFO     | right removable region: 174
[2025-12-13 09:35:13] 2025-12-13 14:34:17,419 | INFO     | sum of square deviations: 1661798600.0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,420 | INFO     | sum of deviations: -28338004876.999996
[2025-12-13 09:35:13] 2025-12-13 14:34:17,420 | INFO     | mean x: 1765631092.0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,420 | INFO     | mean y: 2549915.382857143
[2025-12-13 09:35:13] 2025-12-13 14:34:17,420 | INFO     | intersect: 30111169874.551697
[2025-12-13 09:35:13] 2025-12-13 14:34:17,421 | INFO     | chi2: 0.170210127661256
[2025-12-13 09:35:13] 2025-12-13 14:34:17,421 | INFO     | current chi2=0.170210127661256 (change=89.3965335431232 %)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,421 | INFO     | sum of square deviations: 1523386702.5
[2025-12-13 09:35:13] 2025-12-13 14:34:17,422 | INFO     | sum of deviations: -25510855566.999996
[2025-12-13 09:35:13] 2025-12-13 14:34:17,422 | INFO     | mean x: 1765631244.5
[2025-12-13 09:35:13] 2025-12-13 14:34:17,422 | INFO     | mean y: 2546753.0588235296
[2025-12-13 09:35:13] 2025-12-13 14:34:17,422 | INFO     | intersect: 29570064697.848
[2025-12-13 09:35:13] 2025-12-13 14:34:17,423 | INFO     | chi2: 0.15936764927618988
[2025-12-13 09:35:13] 2025-12-13 14:34:17,423 | INFO     | current chi2=0.15936764927618988 (change=6.370054787012623 %)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,423 | INFO     | left removable region: 20
[2025-12-13 09:35:13] 2025-12-13 14:34:17,424 | INFO     | sum of square deviations: 1132458442.5
[2025-12-13 09:35:13] 2025-12-13 14:34:17,424 | INFO     | sum of deviations: -13541075300.999998
[2025-12-13 09:35:13] 2025-12-13 14:34:17,424 | INFO     | mean x: 1765631366.5
[2025-12-13 09:35:13] 2025-12-13 14:34:17,425 | INFO     | mean y: 2533472.3766233767
[2025-12-13 09:35:13] 2025-12-13 14:34:17,425 | INFO     | intersect: 21114608220.83613
[2025-12-13 09:35:13] 2025-12-13 14:34:17,425 | INFO     | chi2: 0.12270569015405565
[2025-12-13 09:35:13] 2025-12-13 14:34:17,425 | INFO     | current memory leak: -11.96 B/s (using 154 data points, chi2=0.12)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,425 | INFO     | could have reported an average CPU frequency of 2014 MHz (9 samples)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | ..............................
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . Timing measurements:
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . get job = 0 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . initial setup = 2 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . payload setup = 8 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . stage-in = 0 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,426 | INFO     | . payload execution = 10967 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,427 | INFO     | . stage-out = 2 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,427 | INFO     | . log creation = 0 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,427 | INFO     | ..............................
[2025-12-13 09:35:13] 2025-12-13 14:34:17,517 | INFO     | 
[2025-12-13 09:35:13] 2025-12-13 14:34:17,517 | INFO     | job summary report
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | --------------------------------------------------
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | PanDA job id: 6929186049
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | task id: 47898782
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | errors: (none)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 09:35:13] 2025-12-13 14:34:17,518 | INFO     | pilot state: finished 
[2025-12-13 09:35:13] 2025-12-13 14:34:17,519 | INFO     | transexitcode: 0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,519 | INFO     | exeerrorcode: 0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,519 | INFO     | exeerrordiag: 
[2025-12-13 09:35:13] 2025-12-13 14:34:17,519 | INFO     | exitcode: 0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,519 | INFO     | exitmsg: OK
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | cpuconsumptiontime: 81537 s
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | nevents: 400
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | neventsw: 0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | pid: 20402
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | pgrp: 20402
[2025-12-13 09:35:13] 2025-12-13 14:34:17,520 | INFO     | corecount: 8
[2025-12-13 09:35:13] 2025-12-13 14:34:17,521 | INFO     | event service: False
[2025-12-13 09:35:13] 2025-12-13 14:34:17,521 | INFO     | sizes: {0: 2283978, 6: 2284240, 11: 2284268, 10978: 2313327, 10979: 2313326, 10981: 2322380, 10982: 2322564, 10991: 2322822}
[2025-12-13 09:35:13] 2025-12-13 14:34:17,521 | INFO     | --------------------------------------------------
[2025-12-13 09:35:13] 2025-12-13 14:34:17,521 | INFO     | 
[2025-12-13 09:35:13] 2025-12-13 14:34:17,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 09:35:13] 2025-12-13 14:34:17,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 09:35:13] 2025-12-13 14:34:17,557 | INFO     | job 6929186049 has completed (purged errors)
[2025-12-13 09:35:13] 2025-12-13 14:34:17,557 | INFO     | overall cleanup function is called
[2025-12-13 09:35:13] 2025-12-13 14:34:18,561 | INFO     | --- collectZombieJob: --- 10, [20402]
[2025-12-13 09:35:13] 2025-12-13 14:34:18,561 | INFO     | zombie collector waiting for pid 20402
[2025-12-13 09:35:13] 2025-12-13 14:34:18,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 09:35:13] 2025-12-13 14:34:18,562 | INFO     | collected zombie processes
[2025-12-13 09:35:13] 2025-12-13 14:34:18,562 | INFO     | will attempt to kill all subprocesses of pid=20402
[2025-12-13 09:35:13] 2025-12-13 14:34:18,661 | INFO     | process IDs to be killed: [20402] (in reverse order)
[2025-12-13 09:35:13] 2025-12-13 14:34:18,722 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 09:35:13] 2025-12-13 14:34:18,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 09:35:13] 2025-12-13 14:34:18,725 | INFO     | did not find any defunct processes belonging to 20402
[2025-12-13 09:35:13] 2025-12-13 14:34:18,728 | INFO     | did not find any defunct processes belonging to 20402
[2025-12-13 09:35:13] 2025-12-13 14:34:18,728 | INFO     | ready for new job
[2025-12-13 09:35:13] 2025-12-13 14:34:18,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 09:35:13] 2025-12-13 14:34:18,731 | INFO     | ***************************************
[2025-12-13 09:35:13] 2025-12-13 14:34:18,732 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 09:35:13] 2025-12-13 14:34:18,732 | INFO     | ***************************************
[2025-12-13 09:35:13] 2025-12-13 14:34:18,732 | INFO     | 
[2025-12-13 09:35:13] 2025-12-13 14:34:18,732 | INFO     | architecture information:
[2025-12-13 09:35:13] 2025-12-13 14:34:18,733 | INFO     | executing command: cat /etc/os-release
[2025-12-13 09:35:13] 2025-12-13 14:34:18,750 | INFO     | cat /etc/os-release:
[2025-12-13 09:35:13] NAME="CentOS Linux"
[2025-12-13 09:35:13] VERSION="7 (Core)"
[2025-12-13 09:35:13] ID="centos"
[2025-12-13 09:35:13] ID_LIKE="rhel fedora"
[2025-12-13 09:35:13] VERSION_ID="7"
[2025-12-13 09:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 09:35:13] ANSI_COLOR="0;31"
[2025-12-13 09:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 09:35:13] HOME_URL="https://www.centos.org/"
[2025-12-13 09:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 09:35:13] 
[2025-12-13 09:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 09:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 09:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 09:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 09:35:13] 
[2025-12-13 09:35:13] 2025-12-13 14:34:18,750 | INFO     | ***************************************
[2025-12-13 09:35:13] 2025-12-13 14:34:19,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 09:35:13] 2025-12-13 14:34:19,273 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-12-13 09:35:13] 2025-12-13 14:34:19,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 09:35:13] 2025-12-13 14:34:19,274 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 09:35:13] 2025-12-13 14:34:19,274 | INFO     | update_server=False
[2025-12-13 09:35:13] 2025-12-13 14:34:19,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 09:35:13] 2025-12-13 14:34:19,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:35:13] 2025-12-13 14:34:19,275 | INFO     | aborting loop
[2025-12-13 09:35:13] 2025-12-13 14:34:19,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:35:13] 2025-12-13 14:34:19,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 09:35:13] 2025-12-13 14:34:19,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 09:35:13] 2025-12-13 14:34:19,520 | INFO     | all data control threads have been joined
[2025-12-13 09:35:13] 2025-12-13 14:34:19,760 | INFO     | all payload control threads have been joined
[2025-12-13 09:35:13] 2025-12-13 14:34:20,280 | INFO     | [job] retrieve thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,281 | INFO     | [job] job monitor thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,282 | INFO     | [job] queue monitor thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,522 | INFO     | [data] control thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,633 | INFO     | [job] validate thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,766 | INFO     | [payload] control thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,791 | INFO     | [payload] failed_post thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,806 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,808 | INFO     | [data] copytool_in thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:20,852 | INFO     | all job control threads have been joined
[2025-12-13 09:35:13] 2025-12-13 14:34:20,882 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:21,075 | INFO     | [payload] validate_post thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:21,282 | INFO     | [data] copytool_out thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:21,434 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:21,859 | INFO     | [job] control thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:23,283 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:30,059 | INFO     | job.realtimelogging is not enabled
[2025-12-13 09:35:13] 2025-12-13 14:34:31,065 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 09:35:13] 2025-12-13 14:34:49,799 | INFO     | PID=13914 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 09:35:13] 2025-12-13 14:34:49,801 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 09:35:13] 2025-12-13 14:34:49,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 09:35:13] 2025-12-13 14:34:49,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 09:35:13] 2025-12-13 14:35:06,990 | INFO     | [monitor] cgroup control has ended
[2025-12-13 09:35:13] 2025-12-13 14:35:08,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128349927232)>', '<ExcThread(monitor, started 140127309383424)>']
[2025-12-13 09:35:13] 2025-12-13 14:35:08,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 09:35:13] 2025-12-13 14:35:08,891 | INFO     | [monitor] control thread has ended
[2025-12-13 09:35:13] 2025-12-13 14:35:13,412 | INFO     | all workflow threads have been joined
[2025-12-13 09:35:13] 2025-12-13 14:35:13,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 09:35:13] 2025-12-13 14:35:13,421 | INFO     | traces error code: 0
[2025-12-13 09:35:13] 2025-12-13 14:35:13,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 09:35:13] 2025-12-13 14:35:13,545 [wrapper] ==== pilot stdout END ====
[2025-12-13 09:35:13] 2025-12-13 14:35:13,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 09:35:13] 2025-12-13 14:35:13,554 [wrapper] pilotpid: 13914
[2025-12-13 09:35:13] 2025-12-13 14:35:13,559 [wrapper] Pilot exit status: 0
[2025-12-13 09:35:13] 2025-12-13 14:35:13,578 [wrapper] pandaids: 6929186049
[2025-12-13 09:35:13] 2025-12-13 14:35:13,627 [wrapper] cleanup supervisor_pilot  3177 13915
[2025-12-13 09:35:13] 2025-12-13 14:35:13,632 [wrapper] Test setup, not cleaning
[2025-12-13 09:35:13] 2025-12-13 14:35:13,637 [wrapper] apfmon messages muted
[2025-12-13 09:35:13] 2025-12-13 14:35:13,643 [wrapper] ==== wrapper stdout END ====
[2025-12-13 09:35:13] 2025-12-13 14:35:13,647 [wrapper] ==== wrapper stderr END ====
[2025-12-13 09:35:13]  *** Error codes and diagnostics ***
[2025-12-13 09:35:13]     "exeErrorCode": 0,
[2025-12-13 09:35:13]     "exeErrorDiag": "",
[2025-12-13 09:35:13]     "pilotErrorCode": 0,
[2025-12-13 09:35:13]     "pilotErrorDiag": "",
[2025-12-13 09:35:13]  *** Listing of results directory ***
[2025-12-13 09:35:13] total 414884
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 02:59 pilot3.tar.gz
[2025-12-13 09:35:13] -rwx------ 1 boincer umatlas     36322 Dec 13 03:02 runpilot2-wrapper.sh
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:02 queuedata.json
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas       100 Dec 13 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 09:35:13] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 06:30 run_atlas
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas       105 Dec 13 06:30 job.xml
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas 213397758 Dec 13 06:30 EVNT.47898779._000017.pool.root.1
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 06:30 start_atlas.sh
[2025-12-13 09:35:13] drwxrwx--x 2 boincer umatlas      4096 Dec 13 06:30 shared
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 06:30 input.tar.gz
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas         0 Dec 13 06:30 boinc_lockfile
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas      2521 Dec 13 06:30 pandaJob.out
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas        57 Dec 13 06:30 setup.sh.local
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas    991728 Dec 13 06:30 agis_schedconf.cvmfs.json
[2025-12-13 09:35:13] drwx------ 5 boincer umatlas      4096 Dec 13 06:30 pilot3
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas      5911 Dec 13 09:30 init_data.xml
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas 203646023 Dec 13 09:33 HITS.47898782._001340.pool.root.1
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas       531 Dec 13 09:33 boinc_task_state.xml
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas      1048 Dec 13 09:34 memory_monitor_summary.json
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas   1516240 Dec 13 09:34 agis_ddmendpoints.agis.ALL.json
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas    415983 Dec 13 09:34 log.47898782._001340.job.log.tgz.1
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas      7842 Dec 13 09:34 heartbeat.json
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas        95 Dec 13 09:34 pilot_heartbeat.json
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 09:35 boinc_mmap_file
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas        28 Dec 13 09:35 wrapper_checkpoint.txt
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas      4818 Dec 13 09:35 pilotlog.txt
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas   1522877 Dec 13 09:35 log.47898782._001340.job.log.1
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas       357 Dec 13 09:35 output.list
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas       620 Dec 13 09:35 runtime_log
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas   1955840 Dec 13 09:35 result.tar.gz
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas       662 Dec 13 09:35 T2bMDmXlZo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5BSKDmjUAU6m.diag
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 09:35 runtime_log.err
[2025-12-13 09:35:13] -rw-r--r-- 1 boincer umatlas     21415 Dec 13 09:35 stderr.txt
[2025-12-13 09:35:13] HITS file was successfully produced:
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas 203646023 Dec 13 09:33 shared/HITS.pool.root.1
[2025-12-13 09:35:13]  *** Contents of shared directory: ***
[2025-12-13 09:35:13] total 409788
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas 213397758 Dec 13 06:30 ATLAS.root_0
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 06:30 start_atlas.sh
[2025-12-13 09:35:13] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 06:30 input.tar.gz
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas 203646023 Dec 13 09:33 HITS.pool.root.1
[2025-12-13 09:35:13] -rw------- 1 boincer umatlas   1955840 Dec 13 09:35 result.tar.gz
09:35:15 (10240): run_atlas exited; CPU time 81485.679667
09:35:15 (10240): called boinc_finish(0)

</stderr_txt>
]]>

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