Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:42:22 (1163710): wrapper (7.7.26015): starting
06:42:22 (1163710): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 06:42:22] Arguments: --nthreads 8
[2025-12-13 06:42:22] Threads: 8
[2025-12-13 06:42:22] Checking for CVMFS
[2025-12-13 06:42:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:42:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:42:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:42:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:42:23] 2.13.2.0 6926 55762 234992 153959 0 667 28921539 40960000 24315 16776704 0 244954617 99.605 263424133 39397 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 06:42:23] CVMFS is ok
[2025-12-13 06:42:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:42:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 06:42:23] Further information can be found at the LHC@home message board.
[2025-12-13 06:42:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:42:23] Checking for apptainer binary...
[2025-12-13 06:42:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 06:42:23] Running /usr/bin/apptainer --version
[2025-12-13 06:42:23] apptainer version 1.4.4-1.el9
[2025-12-13 06:42:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:42:24] c-212-11.aglt2.org
[2025-12-13 06:42:24] apptainer works
[2025-12-13 06:42:24] Set ATHENA_PROC_NUMBER=8
[2025-12-13 06:42:24] Set ATHENA_CORE_NUMBER=8
[2025-12-13 06:42:24] Starting ATLAS job with PandaID=6929038324
[2025-12-13 06:42:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 12:00:47]  *** The last 200 lines of the pilot log: ***
[2025-12-13 12:00:47] 2025-12-13 16:59:55,981 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 12:00:47] 2025-12-13 16:59:55,987 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2979.263093750002
[2025-12-13 12:00:47] 2025-12-13 16:59:56,256 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929038324/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,332 | INFO     | extracted standard info from prmon json
[2025-12-13 12:00:47] 2025-12-13 16:59:56,332 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 12:00:47] 2025-12-13 16:59:56,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 12:00:47] 2025-12-13 16:59:56,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 12:00:47] 2025-12-13 16:59:56,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 12:00:47] 2025-12-13 16:59:56,476 | INFO     | fitting pss+swap vs Time
[2025-12-13 12:00:47] 2025-12-13 16:59:56,477 | INFO     | sum of square deviations: 9327895234.553053
[2025-12-13 12:00:47] 2025-12-13 16:59:56,533 | INFO     | sum of deviations: 35960216678.5401
[2025-12-13 12:00:47] 2025-12-13 16:59:56,534 | INFO     | mean x: 1765635702.1832798
[2025-12-13 12:00:47] 2025-12-13 16:59:56,534 | INFO     | mean y: 2463081.411575563
[2025-12-13 12:00:47] 2025-12-13 16:59:56,534 | INFO     | intersect: -6804286011.425904
[2025-12-13 12:00:47] 2025-12-13 16:59:56,534 | INFO     | chi2: 4.673490028243898
[2025-12-13 12:00:47] 2025-12-13 16:59:56,535 | INFO     | sum of square deviations: 8885197094.614414
[2025-12-13 12:00:47] 2025-12-13 16:59:56,560 | INFO     | sum of deviations: 93389932388.35289
[2025-12-13 12:00:47] 2025-12-13 16:59:56,560 | INFO     | mean x: 1765635549.6797385
[2025-12-13 12:00:47] 2025-12-13 16:59:56,560 | INFO     | mean y: 2482735.411764706
[2025-12-13 12:00:47] 2025-12-13 16:59:56,560 | INFO     | intersect: -18555640719.948547
[2025-12-13 12:00:47] 2025-12-13 16:59:56,561 | INFO     | chi2: 2.592415140070933
[2025-12-13 12:00:47] 2025-12-13 16:59:56,561 | INFO     | current chi2=2.592415140070933 (change=44.52935334399217 %)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,561 | INFO     | sum of square deviations: 8456750204.312252
[2025-12-13 12:00:47] 2025-12-13 16:59:56,563 | INFO     | sum of deviations: 91636089580.61794
[2025-12-13 12:00:47] 2025-12-13 16:59:56,563 | INFO     | mean x: 1765635397.1794019
[2025-12-13 12:00:47] 2025-12-13 16:59:56,563 | INFO     | mean y: 2482111.099667774
[2025-12-13 12:00:47] 2025-12-13 16:59:56,564 | INFO     | intersect: -19129680896.403957
[2025-12-13 12:00:47] 2025-12-13 16:59:56,587 | INFO     | chi2: 2.5932591016097004
[2025-12-13 12:00:47] 2025-12-13 16:59:56,587 | INFO     | current chi2=2.5932591016097004 (change=-0.0325550304703255 %)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,587 | INFO     | right removable region: 300
[2025-12-13 12:00:47] 2025-12-13 16:59:56,588 | INFO     | sum of square deviations: 8885199781.882395
[2025-12-13 12:00:47] 2025-12-13 16:59:56,590 | INFO     | sum of deviations: -38266754827.92157
[2025-12-13 12:00:47] 2025-12-13 16:59:56,590 | INFO     | mean x: 1765635854.6862745
[2025-12-13 12:00:47] 2025-12-13 16:59:56,590 | INFO     | mean y: 2488559.04248366
[2025-12-13 12:00:47] 2025-12-13 16:59:56,590 | INFO     | intersect: 7606724369.748503
[2025-12-13 12:00:47] 2025-12-13 16:59:56,590 | INFO     | chi2: 2.29408880370815
[2025-12-13 12:00:47] 2025-12-13 16:59:56,591 | INFO     | current chi2=2.29408880370815 (change=50.91272710877758 %)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,599 | INFO     | sum of square deviations: 8456737154.205934
[2025-12-13 12:00:47] 2025-12-13 16:59:56,601 | INFO     | sum of deviations: -52589349409.850494
[2025-12-13 12:00:47] 2025-12-13 16:59:56,601 | INFO     | mean x: 1765636007.1893687
[2025-12-13 12:00:47] 2025-12-13 16:59:56,601 | INFO     | mean y: 2493632.734219269
[2025-12-13 12:00:47] 2025-12-13 16:59:56,601 | INFO     | intersect: 10982336948.133293
[2025-12-13 12:00:47] 2025-12-13 16:59:56,601 | INFO     | chi2: 2.191105274009246
[2025-12-13 12:00:47] 2025-12-13 16:59:56,602 | INFO     | current chi2=2.191105274009246 (change=4.489082093615663 %)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,602 | INFO     | left removable region: 20
[2025-12-13 12:00:47] 2025-12-13 16:59:56,649 | INFO     | sum of square deviations: 6807409692.710734
[2025-12-13 12:00:47] 2025-12-13 16:59:56,656 | INFO     | sum of deviations: 11009801502.114285
[2025-12-13 12:00:47] 2025-12-13 16:59:56,656 | INFO     | mean x: 1765635976.682143
[2025-12-13 12:00:47] 2025-12-13 16:59:56,657 | INFO     | mean y: 2511480.742857143
[2025-12-13 12:00:47] 2025-12-13 16:59:56,657 | INFO     | intersect: -2853097701.8625875
[2025-12-13 12:00:47] 2025-12-13 16:59:56,657 | INFO     | chi2: 0.01961776068685969
[2025-12-13 12:00:47] 2025-12-13 16:59:56,657 | INFO     | current memory leak: 1.62 B/s (using 280 data points, chi2=0.02)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | could have reported an average CPU frequency of 3054 MHz (14 samples)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | ..............................
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . Timing measurements:
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . get job = 0 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . initial setup = 5 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . payload setup = 16 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . stage-in = 0 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,658 | INFO     | . payload execution = 18925 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,659 | INFO     | . stage-out = 7 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,659 | INFO     | . log creation = 0 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,659 | INFO     | ..............................
[2025-12-13 12:00:47] 2025-12-13 16:59:56,926 | INFO     | 
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | job summary report
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | --------------------------------------------------
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | PanDA job id: 6929038324
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | task id: 47898836
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | errors: (none)
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 12:00:47] 2025-12-13 16:59:56,964 | INFO     | pilot state: finished 
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | transexitcode: 0
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | exeerrorcode: 0
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | exeerrordiag: 
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | exitcode: 0
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | exitmsg: OK
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | cpuconsumptiontime: 48193 s
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | nevents: 400
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | neventsw: 0
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | pid: 1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | pgrp: 1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | corecount: 8
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | event service: False
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | sizes: {0: 2283166, 1: 2284022, 12: 2284022, 16: 2284312, 23: 2284340, 18948: 2317535, 18949: 2317662, 18957: 2326744, 18958: 2326800, 18978: 2326994}
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | --------------------------------------------------
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | 
[2025-12-13 12:00:47] 2025-12-13 16:59:56,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 12:00:47] 2025-12-13 16:59:57,084 | INFO     | job 6929038324 has completed (purged errors)
[2025-12-13 12:00:47] 2025-12-13 16:59:57,084 | INFO     | overall cleanup function is called
[2025-12-13 12:00:47] 2025-12-13 16:59:58,108 | INFO     | --- collectZombieJob: --- 10, [1176856]
[2025-12-13 12:00:47] 2025-12-13 16:59:58,108 | INFO     | zombie collector waiting for pid 1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:58,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 12:00:47] 2025-12-13 16:59:58,108 | INFO     | collected zombie processes
[2025-12-13 12:00:47] 2025-12-13 16:59:58,109 | INFO     | will attempt to kill all subprocesses of pid=1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:58,931 | INFO     | PID=1168014 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 12:00:47] 2025-12-13 16:59:58,931 | INFO     | .. there are 22 such processes running
[2025-12-13 12:00:47] 2025-12-13 16:59:59,191 | INFO     | process IDs to be killed: [1176856] (in reverse order)
[2025-12-13 12:00:47] 2025-12-13 16:59:59,443 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 12:00:47] 2025-12-13 16:59:59,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 12:00:47] 2025-12-13 16:59:59,561 | INFO     | did not find any defunct processes belonging to 1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:59,649 | INFO     | did not find any defunct processes belonging to 1176856
[2025-12-13 12:00:47] 2025-12-13 16:59:59,649 | INFO     | ready for new job
[2025-12-13 12:00:47] 2025-12-13 16:59:59,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 12:00:47] 2025-12-13 16:59:59,653 | INFO     | ***************************************
[2025-12-13 12:00:47] 2025-12-13 16:59:59,653 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 12:00:47] 2025-12-13 16:59:59,654 | INFO     | ***************************************
[2025-12-13 12:00:47] 2025-12-13 16:59:59,654 | INFO     | 
[2025-12-13 12:00:47] 2025-12-13 16:59:59,663 | INFO     | architecture information:
[2025-12-13 12:00:47] 2025-12-13 16:59:59,679 | INFO     | executing command: cat /etc/os-release
[2025-12-13 12:00:47] 2025-12-13 16:59:59,812 | INFO     | cat /etc/os-release:
[2025-12-13 12:00:47] NAME="CentOS Linux"
[2025-12-13 12:00:47] VERSION="7 (Core)"
[2025-12-13 12:00:47] ID="centos"
[2025-12-13 12:00:47] ID_LIKE="rhel fedora"
[2025-12-13 12:00:47] VERSION_ID="7"
[2025-12-13 12:00:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 12:00:47] ANSI_COLOR="0;31"
[2025-12-13 12:00:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 12:00:47] HOME_URL="https://www.centos.org/"
[2025-12-13 12:00:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 12:00:47] 
[2025-12-13 12:00:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 12:00:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 12:00:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 12:00:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 12:00:47] 
[2025-12-13 12:00:47] 2025-12-13 16:59:59,812 | INFO     | ***************************************
[2025-12-13 12:00:47] 2025-12-13 17:00:00,316 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 12:00:47] 2025-12-13 17:00:00,426 | INFO     | sufficient remaining disk space (127452315648 B)
[2025-12-13 12:00:47] 2025-12-13 17:00:00,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 12:00:47] 2025-12-13 17:00:00,427 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 12:00:47] 2025-12-13 17:00:00,427 | INFO     | update_server=False
[2025-12-13 12:00:47] 2025-12-13 17:00:00,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 12:00:47] 2025-12-13 17:00:00,541 | INFO     | all payload control threads have been joined
[2025-12-13 12:00:47] 2025-12-13 17:00:00,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 12:00:47] 2025-12-13 17:00:01,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:00:47] 2025-12-13 17:00:01,143 | INFO     | aborting loop
[2025-12-13 12:00:47] 2025-12-13 17:00:01,433 | INFO     | [job] retrieve thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:01,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:01,468 | INFO     | all data control threads have been joined
[2025-12-13 12:00:47] 2025-12-13 17:00:01,561 | INFO     | [payload] control thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:01,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 12:00:47] 2025-12-13 17:00:01,781 | INFO     | [payload] validate_post thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:01,873 | INFO     | all job control threads have been joined
[2025-12-13 12:00:47] 2025-12-13 17:00:01,940 | INFO     | [data] copytool_in thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:01,948 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:00:47] 2025-12-13 17:00:02,011 | INFO     | [job] validate thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,010 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,144 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,189 | INFO     | [job] job monitor thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,496 | INFO     | [data] control thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,548 | INFO     | [payload] failed_post thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:02,879 | INFO     | [job] control thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:03,016 | INFO     | [job] queue monitor thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:03,661 | INFO     | [data] copytool_out thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:04,607 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 12:00:47] 2025-12-13 17:00:34,977 | INFO     | PID=1168014 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 12:00:47] 2025-12-13 17:00:34,978 | INFO     | .. there are 22 such processes running
[2025-12-13 12:00:47] 2025-12-13 17:00:34,989 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 12:00:47] 2025-12-13 17:00:34,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 12:00:47] 2025-12-13 17:00:34,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 12:00:47] 2025-12-13 17:00:36,439 | INFO     | [monitor] cgroup control has ended
[2025-12-13 12:00:47] 2025-12-13 17:00:38,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172221192000)>', '<ExcThread(monitor, started 140171274082048)>']
[2025-12-13 12:00:47] 2025-12-13 17:00:39,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 12:00:47] 2025-12-13 17:00:39,042 | INFO     | [monitor] control thread has ended
[2025-12-13 12:00:47] 2025-12-13 17:00:43,219 | INFO     | all workflow threads have been joined
[2025-12-13 12:00:47] 2025-12-13 17:00:43,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 12:00:47] 2025-12-13 17:00:43,219 | INFO     | traces error code: 0
[2025-12-13 12:00:47] 2025-12-13 17:00:43,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 12:00:47] 2025-12-13 17:00:45,642 [wrapper] ==== pilot stdout END ====
[2025-12-13 12:00:47] 2025-12-13 17:00:45,685 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 12:00:47] 2025-12-13 17:00:45,728 [wrapper] pilotpid: 1168014
[2025-12-13 12:00:47] 2025-12-13 17:00:45,778 [wrapper] Pilot exit status: 0
[2025-12-13 12:00:47] 2025-12-13 17:00:45,909 [wrapper] pandaids: 6929038324
[2025-12-13 12:00:47] 2025-12-13 17:00:46,094 [wrapper] cleanup supervisor_pilot 2463412 1168015
[2025-12-13 12:00:47] 2025-12-13 17:00:46,127 [wrapper] Test setup, not cleaning
[2025-12-13 12:00:47] 2025-12-13 17:00:46,157 [wrapper] apfmon messages muted
[2025-12-13 12:00:47] 2025-12-13 17:00:46,168 [wrapper] ==== wrapper stdout END ====
[2025-12-13 12:00:47] 2025-12-13 17:00:46,186 [wrapper] ==== wrapper stderr END ====
[2025-12-13 12:00:47]  *** Error codes and diagnostics ***
[2025-12-13 12:00:47]     "exeErrorCode": 0,
[2025-12-13 12:00:47]     "exeErrorDiag": "",
[2025-12-13 12:00:47]     "pilotErrorCode": 0,
[2025-12-13 12:00:47]     "pilotErrorDiag": "",
[2025-12-13 12:00:47]  *** Listing of results directory ***
[2025-12-13 12:00:47] total 410008
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas    579449 Dec 13 01:26 pilot3.tar.gz
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 01:47 queuedata.json
[2025-12-13 12:00:47] -rwx------. 1 boincer umatlas     36322 Dec 13 01:47 runpilot2-wrapper.sh
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas       100 Dec 13 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 12:00:47] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 06:42 run_atlas
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas       105 Dec 13 06:42 job.xml
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas 213054322 Dec 13 06:42 EVNT.47898833._000001.pool.root.1
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 06:42 start_atlas.sh
[2025-12-13 12:00:47] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 06:42 shared
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas    592384 Dec 13 06:42 input.tar.gz
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas         0 Dec 13 06:42 boinc_lockfile
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas      2543 Dec 13 06:42 pandaJob.out
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas        57 Dec 13 06:42 setup.sh.local
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas    991728 Dec 13 06:42 agis_schedconf.cvmfs.json
[2025-12-13 12:00:47] drwx------. 5 boincer umatlas      4096 Dec 13 06:43 pilot3
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas 196810343 Dec 13 11:56 HITS.47898836._000103.pool.root.1
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas       531 Dec 13 11:56 boinc_task_state.xml
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas      1056 Dec 13 11:59 memory_monitor_summary.json
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas   1516240 Dec 13 11:59 agis_ddmendpoints.agis.ALL.json
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas    515342 Dec 13 11:59 log.47898836._000103.job.log.tgz.1
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas      7811 Dec 13 11:59 heartbeat.json
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas      6948 Dec 13 12:00 init_data.xml
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas        95 Dec 13 12:00 pilot_heartbeat.json
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 12:00 boinc_mmap_file
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas      4825 Dec 13 12:00 pilotlog.txt
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas        28 Dec 13 12:00 wrapper_checkpoint.txt
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas   2513754 Dec 13 12:00 log.47898836._000103.job.log.1
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas       357 Dec 13 12:00 output.list
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas       620 Dec 13 12:00 runtime_log
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas   3051520 Dec 13 12:00 result.tar.gz
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas      9343 Dec 13 12:00 runtime_log.err
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas       660 Dec 13 12:00 qYsKDmCbYo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7vNKDm1iPnjm.diag
[2025-12-13 12:00:47] -rw-r--r--. 1 boincer umatlas     21283 Dec 13 12:00 stderr.txt
[2025-12-13 12:00:47] HITS file was successfully produced:
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas 196810343 Dec 13 11:56 shared/HITS.pool.root.1
[2025-12-13 12:00:47]  *** Contents of shared directory: ***
[2025-12-13 12:00:47] total 403848
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas 213054322 Dec 13 06:42 ATLAS.root_0
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 06:42 start_atlas.sh
[2025-12-13 12:00:47] -rw-r--r--. 2 boincer umatlas    592384 Dec 13 06:42 input.tar.gz
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas 196810343 Dec 13 11:56 HITS.pool.root.1
[2025-12-13 12:00:47] -rw-------. 1 boincer umatlas   3051520 Dec 13 12:00 result.tar.gz
12:00:48 (1163710): run_atlas exited; CPU time 48801.696123
12:00:48 (1163710): called boinc_finish(0)

</stderr_txt>
]]>

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