Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:34 (19972): wrapper (7.7.26015): starting
06:07:34 (19972): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 06:07:34] Arguments: --nthreads 8
[2025-12-13 06:07:34] Threads: 8
[2025-12-13 06:07:34] Checking for CVMFS
[2025-12-13 06:07:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:07:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:07:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:07:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:07:35] 2.11.2.0 2787 185950 82464 153958 3 1 14100530 20275201 1 130560 2 71715493 99.945 8201912 24864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 06:07:35] CVMFS is ok
[2025-12-13 06:07:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:07:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 06:07:35] Further information can be found at the LHC@home message board.
[2025-12-13 06:07:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:07:35] Checking for apptainer binary...
[2025-12-13 06:07:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 06:07:35] Running /usr/bin/apptainer --version
[2025-12-13 06:07:35] apptainer version 1.3.2-1.el7
[2025-12-13 06:07:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:07:36] c-115-2.aglt2.org
[2025-12-13 06:07:36] apptainer works
[2025-12-13 06:07:36] Set ATHENA_PROC_NUMBER=8
[2025-12-13 06:07:36] Set ATHENA_CORE_NUMBER=8
[2025-12-13 06:07:36] Starting ATLAS job with PandaID=6929244107
[2025-12-13 06:07:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 08:43:15]  *** The last 200 lines of the pilot log: ***
[2025-12-13 08:43:15] 2025-12-13 13:42:10,784 | INFO     | PID=23689 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 08:43:15] 2025-12-13 13:42:11,784 | INFO     | time since job start (9258s) is within the limit (174528.0s)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,541 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 08:43:15] 2025-12-13 13:42:12,544 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-12-13 08:43:15] 2025-12-13 13:42:12,546 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929244107/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,547 | INFO     | extracted standard info from prmon json
[2025-12-13 08:43:15] 2025-12-13 13:42:12,547 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 08:43:15] 2025-12-13 13:42:12,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 08:43:15] 2025-12-13 13:42:12,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 08:43:15] 2025-12-13 13:42:12,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 08:43:15] 2025-12-13 13:42:12,550 | INFO     | fitting pss+swap vs Time
[2025-12-13 08:43:15] 2025-12-13 13:42:12,550 | INFO     | sum of square deviations: 1088905998.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,551 | INFO     | sum of deviations: 11421064434.499996
[2025-12-13 08:43:15] 2025-12-13 13:42:12,551 | INFO     | mean x: 1765628709.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,551 | INFO     | mean y: 2477350.822368421
[2025-12-13 08:43:15] 2025-12-13 13:42:12,551 | INFO     | intersect: -18516439154.03701
[2025-12-13 08:43:15] 2025-12-13 13:42:12,552 | INFO     | chi2: 2.101482774601363
[2025-12-13 08:43:15] 2025-12-13 13:42:12,552 | INFO     | sum of square deviations: 984941258.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | sum of deviations: 20993259739.000004
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | mean x: 1765628557.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | mean y: 2490996.8027210883
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | intersect: -37630513609.95198
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | chi2: 1.3242066672590336
[2025-12-13 08:43:15] 2025-12-13 13:42:12,553 | INFO     | current chi2=1.3242066672590336 (change=36.987032048824354 %)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,554 | INFO     | sum of square deviations: 887813855.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,554 | INFO     | sum of deviations: 20282452724.999996
[2025-12-13 08:43:15] 2025-12-13 13:42:12,554 | INFO     | mean x: 1765628404.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | mean y: 2489880.1690140846
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | intersect: -40333977524.94958
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | chi2: 1.3250329361746607
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | current chi2=1.3250329361746607 (change=-0.062397278012304644 %)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | right removable region: 141
[2025-12-13 08:43:15] 2025-12-13 13:42:12,555 | INFO     | sum of square deviations: 984941258.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,556 | INFO     | sum of deviations: -8668818336.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,556 | INFO     | mean x: 1765628862.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,556 | INFO     | mean y: 2506314.965986395
[2025-12-13 08:43:15] 2025-12-13 13:42:12,556 | INFO     | intersect: 15542433929.08205
[2025-12-13 08:43:15] 2025-12-13 13:42:12,557 | INFO     | chi2: 0.8371296863320934
[2025-12-13 08:43:15] 2025-12-13 13:42:12,557 | INFO     | current chi2=0.8371296863320934 (change=60.164808560427474 %)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,557 | INFO     | sum of square deviations: 887813855.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,558 | INFO     | sum of deviations: -11561869392.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,558 | INFO     | mean x: 1765629014.5
[2025-12-13 08:43:15] 2025-12-13 13:42:12,558 | INFO     | mean y: 2510884.9507042253
[2025-12-13 08:43:15] 2025-12-13 13:42:12,558 | INFO     | intersect: 22996038114.553043
[2025-12-13 08:43:15] 2025-12-13 13:42:12,558 | INFO     | chi2: 0.807604094662254
[2025-12-13 08:43:15] 2025-12-13 13:42:12,559 | INFO     | current chi2=0.807604094662254 (change=3.5270033009110637 %)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,559 | INFO     | left removable region: 20
[2025-12-13 08:43:15] 2025-12-13 13:42:12,559 | INFO     | sum of square deviations: 549294020.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,559 | INFO     | sum of deviations: -2667588987.0000005
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | mean x: 1765628984.0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | mean y: 2528701.504132231
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | intersect: 8577121290.089749
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | chi2: 0.004326946098772317
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | current memory leak: -4.86 B/s (using 121 data points, chi2=0.00)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,560 | INFO     | could have reported an average CPU frequency of 2139 MHz (9 samples)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | ..............................
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . Timing measurements:
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . get job = 0 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . initial setup = 2 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . payload setup = 8 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . stage-in = 0 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . payload execution = 9221 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,561 | INFO     | . stage-out = 0 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,562 | INFO     | . log creation = 0 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,562 | INFO     | ..............................
[2025-12-13 08:43:15] 2025-12-13 13:42:12,651 | INFO     | 
[2025-12-13 08:43:15] 2025-12-13 13:42:12,651 | INFO     | job summary report
[2025-12-13 08:43:15] 2025-12-13 13:42:12,651 | INFO     | --------------------------------------------------
[2025-12-13 08:43:15] 2025-12-13 13:42:12,651 | INFO     | PanDA job id: 6929244107
[2025-12-13 08:43:15] 2025-12-13 13:42:12,652 | INFO     | task id: 47898782
[2025-12-13 08:43:15] 2025-12-13 13:42:12,652 | INFO     | errors: (none)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 08:43:15] 2025-12-13 13:42:12,652 | INFO     | pilot state: finished 
[2025-12-13 08:43:15] 2025-12-13 13:42:12,652 | INFO     | transexitcode: 0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | exeerrorcode: 0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | exeerrordiag: 
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | exitcode: 0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | exitmsg: OK
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | cpuconsumptiontime: 69101 s
[2025-12-13 08:43:15] 2025-12-13 13:42:12,653 | INFO     | nevents: 400
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | neventsw: 0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | pid: 30105
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | pgrp: 30105
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | corecount: 8
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | event service: False
[2025-12-13 08:43:15] 2025-12-13 13:42:12,654 | INFO     | sizes: {0: 2283807, 1: 2284006, 6: 2284268, 11: 2284296, 9233: 2312609, 9234: 2321607, 9236: 2321791, 9242: 2322049}
[2025-12-13 08:43:15] 2025-12-13 13:42:12,655 | INFO     | --------------------------------------------------
[2025-12-13 08:43:15] 2025-12-13 13:42:12,655 | INFO     | 
[2025-12-13 08:43:15] 2025-12-13 13:42:12,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 08:43:15] 2025-12-13 13:42:12,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,686 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 08:43:15] 2025-12-13 13:42:12,686 | INFO     | job 6929244107 has completed (purged errors)
[2025-12-13 08:43:15] 2025-12-13 13:42:12,686 | INFO     | overall cleanup function is called
[2025-12-13 08:43:15] 2025-12-13 13:42:13,695 | INFO     | --- collectZombieJob: --- 10, [30105]
[2025-12-13 08:43:15] 2025-12-13 13:42:13,695 | INFO     | zombie collector waiting for pid 30105
[2025-12-13 08:43:15] 2025-12-13 13:42:13,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 08:43:15] 2025-12-13 13:42:13,695 | INFO     | collected zombie processes
[2025-12-13 08:43:15] 2025-12-13 13:42:13,695 | INFO     | will attempt to kill all subprocesses of pid=30105
[2025-12-13 08:43:15] 2025-12-13 13:42:13,789 | INFO     | process IDs to be killed: [30105] (in reverse order)
[2025-12-13 08:43:15] 2025-12-13 13:42:13,843 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 08:43:15] 2025-12-13 13:42:13,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 08:43:15] 2025-12-13 13:42:13,848 | INFO     | did not find any defunct processes belonging to 30105
[2025-12-13 08:43:15] 2025-12-13 13:42:13,851 | INFO     | did not find any defunct processes belonging to 30105
[2025-12-13 08:43:15] 2025-12-13 13:42:13,851 | INFO     | ready for new job
[2025-12-13 08:43:15] 2025-12-13 13:42:13,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 08:43:15] 2025-12-13 13:42:13,854 | INFO     | ***************************************
[2025-12-13 08:43:15] 2025-12-13 13:42:13,854 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 08:43:15] 2025-12-13 13:42:13,854 | INFO     | ***************************************
[2025-12-13 08:43:15] 2025-12-13 13:42:13,854 | INFO     | 
[2025-12-13 08:43:15] 2025-12-13 13:42:13,855 | INFO     | architecture information:
[2025-12-13 08:43:15] 2025-12-13 13:42:13,855 | INFO     | executing command: cat /etc/os-release
[2025-12-13 08:43:15] 2025-12-13 13:42:13,875 | INFO     | cat /etc/os-release:
[2025-12-13 08:43:15] NAME="CentOS Linux"
[2025-12-13 08:43:15] VERSION="7 (Core)"
[2025-12-13 08:43:15] ID="centos"
[2025-12-13 08:43:15] ID_LIKE="rhel fedora"
[2025-12-13 08:43:15] VERSION_ID="7"
[2025-12-13 08:43:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 08:43:15] ANSI_COLOR="0;31"
[2025-12-13 08:43:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 08:43:15] HOME_URL="https://www.centos.org/"
[2025-12-13 08:43:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 08:43:15] 
[2025-12-13 08:43:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 08:43:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 08:43:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 08:43:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 08:43:15] 
[2025-12-13 08:43:15] 2025-12-13 13:42:13,876 | INFO     | ***************************************
[2025-12-13 08:43:15] 2025-12-13 13:42:14,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 08:43:15] 2025-12-13 13:42:14,397 | INFO     | sufficient remaining disk space (18586009600 B)
[2025-12-13 08:43:15] 2025-12-13 13:42:14,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 08:43:15] 2025-12-13 13:42:14,398 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 08:43:15] 2025-12-13 13:42:14,398 | INFO     | update_server=False
[2025-12-13 08:43:15] 2025-12-13 13:42:14,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 08:43:15] 2025-12-13 13:42:14,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:43:15] 2025-12-13 13:42:14,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:43:15] 2025-12-13 13:42:14,399 | INFO     | aborting loop
[2025-12-13 08:43:15] 2025-12-13 13:42:14,518 | INFO     | all data control threads have been joined
[2025-12-13 08:43:15] 2025-12-13 13:42:14,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 08:43:15] 2025-12-13 13:42:15,400 | INFO     | [job] retrieve thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,404 | INFO     | [job] queue monitor thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,405 | INFO     | [job] job monitor thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,524 | INFO     | [data] control thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,531 | INFO     | all payload control threads have been joined
[2025-12-13 08:43:15] 2025-12-13 13:42:15,723 | INFO     | [data] copytool_in thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,735 | INFO     | [payload] validate_post thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,790 | INFO     | [payload] failed_post thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:15,989 | INFO     | all job control threads have been joined
[2025-12-13 08:43:15] 2025-12-13 13:42:16,015 | INFO     | [job] validate thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,078 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,479 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,535 | INFO     | [payload] control thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,605 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,976 | INFO     | [data] copytool_out thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:16,991 | INFO     | [job] control thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:17,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 08:43:15] 2025-12-13 13:42:21,721 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:24,571 | INFO     | job.realtimelogging is not enabled
[2025-12-13 08:43:15] 2025-12-13 13:42:25,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 08:43:15] 2025-12-13 13:42:44,983 | INFO     | PID=23689 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 08:43:15] 2025-12-13 13:42:44,984 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 08:43:15] 2025-12-13 13:42:44,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 08:43:15] 2025-12-13 13:42:44,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 08:43:15] 2025-12-13 13:43:08,459 | INFO     | [monitor] cgroup control has ended
[2025-12-13 08:43:15] 2025-12-13 13:43:10,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546007906112)>', '<ExcThread(monitor, started 140545322104576)>']
[2025-12-13 08:43:15] 2025-12-13 13:43:11,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 08:43:15] 2025-12-13 13:43:11,117 | INFO     | [monitor] control thread has ended
[2025-12-13 08:43:15] 2025-12-13 13:43:15,190 | INFO     | all workflow threads have been joined
[2025-12-13 08:43:15] 2025-12-13 13:43:15,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 08:43:15] 2025-12-13 13:43:15,191 | INFO     | traces error code: 0
[2025-12-13 08:43:15] 2025-12-13 13:43:15,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 08:43:15] 2025-12-13 13:43:15,298 [wrapper] ==== pilot stdout END ====
[2025-12-13 08:43:15] 2025-12-13 13:43:15,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 08:43:15] 2025-12-13 13:43:15,307 [wrapper] pilotpid: 23689
[2025-12-13 08:43:15] 2025-12-13 13:43:15,312 [wrapper] Pilot exit status: 0
[2025-12-13 08:43:15] 2025-12-13 13:43:15,332 [wrapper] pandaids: 6929244107
[2025-12-13 08:43:15] 2025-12-13 13:43:15,382 [wrapper] cleanup supervisor_pilot   522 23690
[2025-12-13 08:43:15] 2025-12-13 13:43:15,388 [wrapper] Test setup, not cleaning
[2025-12-13 08:43:15] 2025-12-13 13:43:15,392 [wrapper] apfmon messages muted
[2025-12-13 08:43:15] 2025-12-13 13:43:15,397 [wrapper] ==== wrapper stdout END ====
[2025-12-13 08:43:15] 2025-12-13 13:43:15,402 [wrapper] ==== wrapper stderr END ====
[2025-12-13 08:43:15]  *** Error codes and diagnostics ***
[2025-12-13 08:43:15]     "exeErrorCode": 0,
[2025-12-13 08:43:15]     "exeErrorDiag": "",
[2025-12-13 08:43:15]     "pilotErrorCode": 0,
[2025-12-13 08:43:15]     "pilotErrorDiag": "",
[2025-12-13 08:43:15]  *** Listing of results directory ***
[2025-12-13 08:43:15] total 407464
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 04:03 queuedata.json
[2025-12-13 08:43:15] -rwx------ 1 boincer umatlas     36322 Dec 13 04:04 runpilot2-wrapper.sh
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas       100 Dec 13 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 08:43:15] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 06:07 run_atlas
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas       105 Dec 13 06:07 job.xml
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas 213013516 Dec 13 06:07 EVNT.47898779._000091.pool.root.1
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 06:07 start_atlas.sh
[2025-12-13 08:43:15] drwxrwx--x 2 boincer umatlas      4096 Dec 13 06:07 shared
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 06:07 input.tar.gz
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas         0 Dec 13 06:07 boinc_lockfile
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas      2521 Dec 13 06:07 pandaJob.out
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas        57 Dec 13 06:07 setup.sh.local
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas    991728 Dec 13 06:07 agis_schedconf.cvmfs.json
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas   1516240 Dec 13 06:07 agis_ddmendpoints.agis.ALL.json
[2025-12-13 08:43:15] drwx------ 5 boincer umatlas      4096 Dec 13 06:07 pilot3
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas      5908 Dec 13 08:39 init_data.xml
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas 196908499 Dec 13 08:41 HITS.47898782._002027.pool.root.1
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas       529 Dec 13 08:41 boinc_task_state.xml
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas        95 Dec 13 08:41 pilot_heartbeat.json
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas      1055 Dec 13 08:42 memory_monitor_summary.json
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas    404995 Dec 13 08:42 log.47898782._002027.job.log.tgz.1
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas      7847 Dec 13 08:42 heartbeat.json
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 08:43 boinc_mmap_file
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas        27 Dec 13 08:43 wrapper_checkpoint.txt
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas      4818 Dec 13 08:43 pilotlog.txt
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas   1296297 Dec 13 08:43 log.47898782._002027.job.log.1
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas       357 Dec 13 08:43 output.list
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas       620 Dec 13 08:43 runtime_log
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas   1720320 Dec 13 08:43 result.tar.gz
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas       660 Dec 13 08:43 zc0LDm0iao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhYSKDmbFCvIm.diag
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas      9337 Dec 13 08:43 runtime_log.err
[2025-12-13 08:43:15] -rw-r--r-- 1 boincer umatlas     21149 Dec 13 08:43 stderr.txt
[2025-12-13 08:43:15] HITS file was successfully produced:
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas 196908499 Dec 13 08:41 shared/HITS.pool.root.1
[2025-12-13 08:43:15]  *** Contents of shared directory: ***
[2025-12-13 08:43:15] total 402600
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas 213013516 Dec 13 06:07 ATLAS.root_0
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 06:07 start_atlas.sh
[2025-12-13 08:43:15] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 06:07 input.tar.gz
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas 196908499 Dec 13 08:41 HITS.pool.root.1
[2025-12-13 08:43:15] -rw------- 1 boincer umatlas   1720320 Dec 13 08:43 result.tar.gz
08:43:17 (19972): run_atlas exited; CPU time 69059.466003
08:43:17 (19972): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN