Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:50:31 (22540): wrapper (7.7.26015): starting
05:50:31 (22540): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 05:50:31] Arguments: --nthreads 12
[2025-12-13 05:50:31] Threads: 12
[2025-12-13 05:50:31] Checking for CVMFS
[2025-12-13 05:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 05:50:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 05:50:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 05:50:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 05:50:32] 2.11.2.0 2925 312064 96396 153957 0 57 15136547 20275200 1 130560 1 137749034 99.966 18151609 15157 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 05:50:32] CVMFS is ok
[2025-12-13 05:50:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 05:50:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 05:50:32] Further information can be found at the LHC@home message board.
[2025-12-13 05:50:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 05:50:32] Checking for apptainer binary...
[2025-12-13 05:50:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 05:50:32] Running /usr/bin/apptainer --version
[2025-12-13 05:50:32] apptainer version 1.3.2-1.el7
[2025-12-13 05:50:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 05:50:33] c-205-9.aglt2.org
[2025-12-13 05:50:33] apptainer works
[2025-12-13 05:50:33] Set ATHENA_PROC_NUMBER=12
[2025-12-13 05:50:33] Set ATHENA_CORE_NUMBER=12
[2025-12-13 05:50:33] Starting ATLAS job with PandaID=6929243853
[2025-12-13 05:50:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 07:33:26]  *** The last 200 lines of the pilot log: ***
[2025-12-13 07:33:26] 2025-12-13 12:32:54,063 | INFO     | current chi2=1.4834408442670348 (change=-0.2502583293192976 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,064 | INFO     | right removable region: 94
[2025-12-13 07:33:26] 2025-12-13 12:32:54,064 | INFO     | sum of square deviations: 265828240.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,064 | INFO     | sum of deviations: -4079248120.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,064 | INFO     | mean x: 1765626249.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,064 | INFO     | mean y: 2693293.915789474
[2025-12-13 07:33:26] 2025-12-13 12:32:54,065 | INFO     | intersect: 27096983790.87692
[2025-12-13 07:33:26] 2025-12-13 12:32:54,065 | INFO     | chi2: 0.07262285012259886
[2025-12-13 07:33:26] 2025-12-13 12:32:54,065 | INFO     | current chi2=0.07262285012259886 (change=95.09218078123011 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,065 | INFO     | sum of square deviations: 226022842.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | sum of deviations: -2801662869.5000005
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | mean x: 1765626401.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | mean y: 2688157.388888889
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | intersect: 21888484636.085285
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | chi2: 0.04790090876044993
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | current chi2=0.04790090876044993 (change=34.041546593688324 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,066 | INFO     | sum of square deviations: 190403570.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | sum of deviations: 489916193.00000006
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | mean x: 1765626554.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | mean y: 2674033.6
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | intersect: -4540355488.353759
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | chi2: 0.011418832870429036
[2025-12-13 07:33:26] 2025-12-13 12:32:54,067 | INFO     | current chi2=0.011418832870429036 (change=76.1615527431138 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,068 | INFO     | sum of square deviations: 158737860.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,068 | INFO     | sum of deviations: 894872653.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,068 | INFO     | mean x: 1765626706.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,068 | INFO     | mean y: 2672254.6875
[2025-12-13 07:33:26] 2025-12-13 12:32:54,068 | INFO     | intersect: -9950914469.58937
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | chi2: 0.00022869959328773162
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | current chi2=0.00022869959328773162 (change=97.997171901167 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | sum of square deviations: 130793150.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | sum of deviations: 594547358.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | mean x: 1765626859.0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,069 | INFO     | mean y: 2673892.1866666665
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | intersect: -8023348756.799832
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | chi2: 0.00010225078983274718
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | current chi2=0.00010225078983274718 (change=55.29034907197959 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | sum of square deviations: 106336877.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | sum of deviations: 425476982.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,070 | INFO     | mean x: 1765627011.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | mean y: 2674944.4142857143
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | intersect: -7061982874.539565
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | chi2: 7.807159419397616e-05
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | current chi2=7.807159419397616e-05 (change=23.64695243755204 %)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | left removable region: 60
[2025-12-13 07:33:26] 2025-12-13 12:32:54,071 | INFO     | sum of square deviations: 12176972.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | sum of deviations: 12108652.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | mean x: 1765627743.5
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | mean y: 2678620.970588235
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | intersect: -1753042909.1881301
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | chi2: 7.044549243126749e-07
[2025-12-13 07:33:26] 2025-12-13 12:32:54,072 | INFO     | current memory leak: 0.99 B/s (using 34 data points, chi2=0.00)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | could have reported an average CPU frequency of 2122 MHz (7 samples)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | ..............................
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . Timing measurements:
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . get job = 0 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . initial setup = 2 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . payload setup = 7 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . stage-in = 0 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,073 | INFO     | . payload execution = 6090 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,074 | INFO     | . stage-out = 0 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,074 | INFO     | . log creation = 0 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,074 | INFO     | ..............................
[2025-12-13 07:33:26] 2025-12-13 12:32:54,155 | INFO     | 
[2025-12-13 07:33:26] 2025-12-13 12:32:54,155 | INFO     | job summary report
[2025-12-13 07:33:26] 2025-12-13 12:32:54,156 | INFO     | --------------------------------------------------
[2025-12-13 07:33:26] 2025-12-13 12:32:54,156 | INFO     | PanDA job id: 6929243853
[2025-12-13 07:33:26] 2025-12-13 12:32:54,156 | INFO     | task id: 47898782
[2025-12-13 07:33:26] 2025-12-13 12:32:54,156 | INFO     | errors: (none)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | pilot state: finished 
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | transexitcode: 0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | exeerrorcode: 0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | exeerrordiag: 
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | exitcode: 0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | exitmsg: OK
[2025-12-13 07:33:26] 2025-12-13 12:32:54,157 | INFO     | cpuconsumptiontime: 67182 s
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | nevents: 400
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | neventsw: 0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | pid: 32637
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | pgrp: 32637
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | corecount: 12
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | event service: False
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | sizes: {0: 2283978, 1: 2283978, 5: 2284268, 11: 2284324, 6101: 2311076, 6102: 2320102, 6103: 2320286, 6109: 2320480}
[2025-12-13 07:33:26] 2025-12-13 12:32:54,158 | INFO     | --------------------------------------------------
[2025-12-13 07:33:26] 2025-12-13 12:32:54,159 | INFO     | 
[2025-12-13 07:33:26] 2025-12-13 12:32:54,159 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 07:33:26] 2025-12-13 12:32:54,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,182 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 07:33:26] 2025-12-13 12:32:54,186 | INFO     | job 6929243853 has completed (purged errors)
[2025-12-13 07:33:26] 2025-12-13 12:32:54,186 | INFO     | overall cleanup function is called
[2025-12-13 07:33:26] 2025-12-13 12:32:55,194 | INFO     | --- collectZombieJob: --- 10, [32637]
[2025-12-13 07:33:26] 2025-12-13 12:32:55,194 | INFO     | zombie collector waiting for pid 32637
[2025-12-13 07:33:26] 2025-12-13 12:32:55,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 07:33:26] 2025-12-13 12:32:55,195 | INFO     | collected zombie processes
[2025-12-13 07:33:26] 2025-12-13 12:32:55,195 | INFO     | will attempt to kill all subprocesses of pid=32637
[2025-12-13 07:33:26] 2025-12-13 12:32:55,286 | INFO     | process IDs to be killed: [32637] (in reverse order)
[2025-12-13 07:33:26] 2025-12-13 12:32:55,339 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 07:33:26] 2025-12-13 12:32:55,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 07:33:26] 2025-12-13 12:32:55,343 | INFO     | did not find any defunct processes belonging to 32637
[2025-12-13 07:33:26] 2025-12-13 12:32:55,347 | INFO     | did not find any defunct processes belonging to 32637
[2025-12-13 07:33:26] 2025-12-13 12:32:55,347 | INFO     | ready for new job
[2025-12-13 07:33:26] 2025-12-13 12:32:55,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 07:33:26] 2025-12-13 12:32:55,349 | INFO     | ***************************************
[2025-12-13 07:33:26] 2025-12-13 12:32:55,349 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 07:33:26] 2025-12-13 12:32:55,349 | INFO     | ***************************************
[2025-12-13 07:33:26] 2025-12-13 12:32:55,349 | INFO     | 
[2025-12-13 07:33:26] 2025-12-13 12:32:55,350 | INFO     | architecture information:
[2025-12-13 07:33:26] 2025-12-13 12:32:55,350 | INFO     | executing command: cat /etc/os-release
[2025-12-13 07:33:26] 2025-12-13 12:32:55,365 | INFO     | cat /etc/os-release:
[2025-12-13 07:33:26] NAME="CentOS Linux"
[2025-12-13 07:33:26] VERSION="7 (Core)"
[2025-12-13 07:33:26] ID="centos"
[2025-12-13 07:33:26] ID_LIKE="rhel fedora"
[2025-12-13 07:33:26] VERSION_ID="7"
[2025-12-13 07:33:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 07:33:26] ANSI_COLOR="0;31"
[2025-12-13 07:33:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 07:33:26] HOME_URL="https://www.centos.org/"
[2025-12-13 07:33:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 07:33:26] 
[2025-12-13 07:33:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 07:33:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 07:33:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 07:33:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 07:33:26] 
[2025-12-13 07:33:26] 2025-12-13 12:32:55,365 | INFO     | ***************************************
[2025-12-13 07:33:26] 2025-12-13 12:32:55,868 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 07:33:26] 2025-12-13 12:32:55,944 | INFO     | sufficient remaining disk space (29351739392 B)
[2025-12-13 07:33:26] 2025-12-13 12:32:55,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 07:33:26] 2025-12-13 12:32:55,945 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 07:33:26] 2025-12-13 12:32:55,945 | INFO     | update_server=False
[2025-12-13 07:33:26] 2025-12-13 12:32:55,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 07:33:26] 2025-12-13 12:32:55,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:33:26] 2025-12-13 12:32:55,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 07:33:26] 2025-12-13 12:32:56,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 07:33:26] 2025-12-13 12:32:56,037 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 07:33:26] 2025-12-13 12:32:56,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:33:26] 2025-12-13 12:32:56,038 | INFO     | will abort loop
[2025-12-13 07:33:26] 2025-12-13 12:32:56,209 | INFO     | all payload control threads have been joined
[2025-12-13 07:33:26] 2025-12-13 12:32:56,888 | INFO     | all job control threads have been joined
[2025-12-13 07:33:26] 2025-12-13 12:32:56,895 | INFO     | all data control threads have been joined
[2025-12-13 07:33:26] 2025-12-13 12:32:56,951 | INFO     | [job] retrieve thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:56,951 | INFO     | [job] queue monitor thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:56,986 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,043 | INFO     | [job] job monitor thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,082 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,102 | INFO     | [data] copytool_in thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,214 | INFO     | [payload] control thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,580 | INFO     | [job] validate thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,738 | INFO     | [monitor] cgroup control has ended
[2025-12-13 07:33:26] 2025-12-13 12:32:57,879 | INFO     | [payload] validate_post thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,893 | INFO     | [job] control thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,900 | INFO     | [data] control thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,935 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,952 | INFO     | [data] copytool_out thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:32:57,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 07:33:26] 2025-12-13 12:32:57,989 | INFO     | [payload] failed_post thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:33:01,964 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:33:06,210 | INFO     | job.realtimelogging is not enabled
[2025-12-13 07:33:26] 2025-12-13 12:33:07,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 07:33:26] 2025-12-13 12:33:09,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528139851584)>', '<ExcThread(monitor, started 140526883952384)>']
[2025-12-13 07:33:26] 2025-12-13 12:33:14,324 | INFO     | all workflow threads have been joined
[2025-12-13 07:33:26] 2025-12-13 12:33:14,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 07:33:26] 2025-12-13 12:33:14,324 | INFO     | traces error code: 0
[2025-12-13 07:33:26] 2025-12-13 12:33:14,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 07:33:26] 2025-12-13 12:33:25,933 | INFO     | PID=26233 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 07:33:26] 2025-12-13 12:33:25,934 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 07:33:26] 2025-12-13 12:33:25,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 07:33:26] 2025-12-13 12:33:25,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 07:33:26] 2025-12-13 12:33:25,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 07:33:26] 2025-12-13 12:33:25,934 | INFO     | [monitor] control thread has ended
[2025-12-13 07:33:26] 2025-12-13 12:33:26,023 [wrapper] ==== pilot stdout END ====
[2025-12-13 07:33:26] 2025-12-13 12:33:26,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 07:33:26] 2025-12-13 12:33:26,030 [wrapper] pilotpid: 26233
[2025-12-13 07:33:26] 2025-12-13 12:33:26,034 [wrapper] Pilot exit status: 0
[2025-12-13 07:33:26] 2025-12-13 12:33:26,049 [wrapper] pandaids: 6929243853
[2025-12-13 07:33:26] 2025-12-13 12:33:26,089 [wrapper] cleanup supervisor_pilot 32033 26234
[2025-12-13 07:33:26] 2025-12-13 12:33:26,093 [wrapper] Test setup, not cleaning
[2025-12-13 07:33:26] 2025-12-13 12:33:26,096 [wrapper] apfmon messages muted
[2025-12-13 07:33:26] 2025-12-13 12:33:26,100 [wrapper] ==== wrapper stdout END ====
[2025-12-13 07:33:26] 2025-12-13 12:33:26,104 [wrapper] ==== wrapper stderr END ====
[2025-12-13 07:33:26]  *** Error codes and diagnostics ***
[2025-12-13 07:33:26]     "exeErrorCode": 0,
[2025-12-13 07:33:26]     "exeErrorDiag": "",
[2025-12-13 07:33:26]     "pilotErrorCode": 0,
[2025-12-13 07:33:26]     "pilotErrorDiag": "",
[2025-12-13 07:33:26]  *** Listing of results directory ***
[2025-12-13 07:33:26] total 415948
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 04:03 queuedata.json
[2025-12-13 07:33:26] -rwx------ 1 boincer umatlas     36322 Dec 13 04:03 runpilot2-wrapper.sh
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas       100 Dec 13 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 07:33:26] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 05:50 run_atlas
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas       105 Dec 13 05:50 job.xml
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas 215670664 Dec 13 05:50 EVNT.47898779._000081.pool.root.1
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 05:50 start_atlas.sh
[2025-12-13 07:33:26] drwxrwx--x 2 boincer umatlas      4096 Dec 13 05:50 shared
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas    592393 Dec 13 05:50 input.tar.gz
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas         0 Dec 13 05:50 boinc_lockfile
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas      2521 Dec 13 05:50 pandaJob.out
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas        57 Dec 13 05:50 setup.sh.local
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas    991728 Dec 13 05:50 agis_schedconf.cvmfs.json
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas   1516240 Dec 13 05:50 agis_ddmendpoints.agis.ALL.json
[2025-12-13 07:33:26] drwx------ 5 boincer umatlas      4096 Dec 13 05:50 pilot3
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 07:28 init_data.xml
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas 203769403 Dec 13 07:32 HITS.47898782._001773.pool.root.1
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas       529 Dec 13 07:32 boinc_task_state.xml
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas      1046 Dec 13 07:32 memory_monitor_summary.json
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas    414512 Dec 13 07:32 log.47898782._001773.job.log.tgz.1
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas      7837 Dec 13 07:32 heartbeat.json
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 07:33 boinc_mmap_file
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas        27 Dec 13 07:33 wrapper_checkpoint.txt
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas       745 Dec 13 07:33 pilotlog.txt
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas        95 Dec 13 07:33 pilot_heartbeat.json
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas    873931 Dec 13 07:33 log.47898782._001773.job.log.1
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas       357 Dec 13 07:33 output.list
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas       620 Dec 13 07:33 runtime_log
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas   1310720 Dec 13 07:33 result.tar.gz
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 07:33 runtime_log.err
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas       659 Dec 13 07:33 GNcMDmqiao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNWSKDmmIyzvn.diag
[2025-12-13 07:33:26] -rw-r--r-- 1 boincer umatlas     20948 Dec 13 07:33 stderr.txt
[2025-12-13 07:33:26] HITS file was successfully produced:
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas 203769403 Dec 13 07:32 shared/HITS.pool.root.1
[2025-12-13 07:33:26]  *** Contents of shared directory: ***
[2025-12-13 07:33:26] total 411488
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas 215670664 Dec 13 05:50 ATLAS.root_0
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 05:50 start_atlas.sh
[2025-12-13 07:33:26] -rw-r--r-- 2 boincer umatlas    592393 Dec 13 05:50 input.tar.gz
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas 203769403 Dec 13 07:32 HITS.pool.root.1
[2025-12-13 07:33:26] -rw------- 1 boincer umatlas   1310720 Dec 13 07:33 result.tar.gz
07:33:27 (22540): run_atlas exited; CPU time 67166.589883
07:33:27 (22540): called boinc_finish(0)

</stderr_txt>
]]>

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