Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:31:18 (123371): wrapper (7.7.26015): starting
14:31:18 (123371): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 14:31:18] Arguments: --nthreads 4
[2025-12-13 14:31:18] Threads: 4
[2025-12-13 14:31:18] Checking for CVMFS
[2025-12-13 14:31:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 14:31:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 14:31:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 14:31:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 14:31:18] 2.9.2.0 3090 311 66548 153962 0 56 29717690 36864001 0 130560 0 314340 99.993 12241 17265 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-13 14:31:18] CVMFS is ok
[2025-12-13 14:31:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 14:31:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 14:31:18] Further information can be found at the LHC@home message board.
[2025-12-13 14:31:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 14:31:18] Checking for apptainer binary...
[2025-12-13 14:31:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 14:31:18] Running /usr/bin/apptainer --version
[2025-12-13 14:31:18] apptainer version 1.4.1-1.1
[2025-12-13 14:31:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 14:31:18] thA373a
[2025-12-13 14:31:18] apptainer works
[2025-12-13 14:31:18] Set ATHENA_PROC_NUMBER=4
[2025-12-13 14:31:18] Set ATHENA_CORE_NUMBER=4
[2025-12-13 14:31:18] Starting ATLAS job with PandaID=6929244660
[2025-12-13 14:31:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:35:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:35:32] 2025-12-13 13:34:43,767 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:43,916 | INFO     | [data] control thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:43,999 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:44,301 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:44,583 | INFO     | [job] validate thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:44,665 | INFO     | [payload] control thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:44,687 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:44,833 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:45,483 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:34:47,759 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:35:32] 2025-12-13 13:35:13,232 | INFO     | PID=127157 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 14:35:32] 2025-12-13 13:35:13,232 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:35:32] 2025-12-13 13:35:13,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:35:32] 2025-12-13 13:35:13,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:35:32] 2025-12-13 13:35:26,427 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:35:32] 2025-12-13 13:35:27,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086357108544)>', '<ExcThread(monitor, started 140085542491904)>']
[2025-12-13 14:35:32] 2025-12-13 13:35:28,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:35:32] 2025-12-13 13:35:28,312 | INFO     | [monitor] control thread has ended
[2025-12-13 14:35:32] 2025-12-13 13:35:32,747 | INFO     | all workflow threads have been joined
[2025-12-13 14:35:32] 2025-12-13 13:35:32,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:35:32] 2025-12-13 13:35:32,748 | INFO     | traces error code: 0
[2025-12-13 14:35:32] 2025-12-13 13:35:32,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:35:32] 2025-12-13 13:35:32,825 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:35:32] 2025-12-13 13:35:32,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:35:32] 2025-12-13 13:35:32,833 [wrapper] pilotpid: 127157
[2025-12-13 14:35:32] 2025-12-13 13:35:32,838 [wrapper] Pilot exit status: 0
[2025-12-13 14:35:32] 2025-12-13 13:35:32,850 [wrapper] pandaids: 6929244660
[2025-12-13 14:35:32] 2025-12-13 13:35:32,872 [wrapper] cleanup supervisor_pilot  127163 127158
[2025-12-13 14:35:32] 2025-12-13 13:35:32,876 [wrapper] Test setup, not cleaning
[2025-12-13 14:35:32] 2025-12-13 13:35:32,880 [wrapper] apfmon messages muted
[2025-12-13 14:35:32] 2025-12-13 13:35:32,883 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:35:32] 2025-12-13 13:35:32,887 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:35:32]  *** Error codes and diagnostics ***
[2025-12-13 14:35:32]     "exeErrorCode": 65,
[2025-12-13 14:35:32]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-13 14:35:32]     "pilotErrorCode": 1305,
[2025-12-13 14:35:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129)",
[2025-12-13 14:35:32]  *** Listing of results directory ***
[2025-12-13 14:35:32] total 213736
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-13 14:35:32] -rwx------ 1 boinc boinc     36322 Dec 13 10:00 runpilot2-wrapper.sh
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      5112 Dec 13 10:00 queuedata.json
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc       100 Dec 13 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:35:32] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 14:31 run_atlas
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc       105 Dec 13 14:31 job.xml
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc 214736753 Dec 13 14:31 EVNT.47898779._000101.pool.root.1
[2025-12-13 14:35:32] drwxrwx--x 2 boinc boinc      4096 Dec 13 14:31 shared
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc    592392 Dec 13 14:31 input.tar.gz
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc     15847 Dec 13 14:31 start_atlas.sh
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc         0 Dec 13 14:31 boinc_setup_complete
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      6378 Dec 13 14:31 init_data.xml
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc         0 Dec 13 14:31 boinc_lockfile
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      2518 Dec 13 14:31 pandaJob.out
[2025-12-13 14:35:32] -rw------- 1 boinc boinc    991736 Dec 13 14:31 agis_schedconf.cvmfs.json
[2025-12-13 14:35:32] -rw------- 1 boinc boinc   1516240 Dec 13 14:31 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:35:32] drwx------ 5 boinc boinc      4096 Dec 13 14:31 pilot3
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc       523 Dec 13 14:32 boinc_task_state.xml
[2025-12-13 14:35:32] -rw------- 1 boinc boinc       951 Dec 13 14:32 memory_monitor_summary.json
[2025-12-13 14:35:32] -rw------- 1 boinc boinc     26443 Dec 13 14:32 log.47898782._002205.job.log.tgz.1
[2025-12-13 14:35:32] -rw------- 1 boinc boinc        95 Dec 13 14:34 pilot_heartbeat.json
[2025-12-13 14:35:32] -rw------- 1 boinc boinc      8388 Dec 13 14:34 heartbeat.json
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      8192 Dec 13 14:35 boinc_mmap_file
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc        23 Dec 13 14:35 wrapper_checkpoint.txt
[2025-12-13 14:35:32] -rw------- 1 boinc boinc      4751 Dec 13 14:35 pilotlog.txt
[2025-12-13 14:35:32] -rw------- 1 boinc boinc     86490 Dec 13 14:35 log.47898782._002205.job.log.1
[2025-12-13 14:35:32] -rw------- 1 boinc boinc       188 Dec 13 14:35 output.list
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc       620 Dec 13 14:35 runtime_log
[2025-12-13 14:35:32] -rw------- 1 boinc boinc    133120 Dec 13 14:35 result.tar.gz
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      8749 Dec 13 14:35 runtime_log.err
[2025-12-13 14:35:32] -rw------- 1 boinc boinc       649 Dec 13 14:35 GhGODmRfao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoOOKDmUJE7nm.diag
[2025-12-13 14:35:32] -rw-r--r-- 1 boinc boinc      5923 Dec 13 14:35 stderr.txt
[2025-12-13 14:35:32] No HITS result produced
[2025-12-13 14:35:32]  *** Contents of shared directory: ***
[2025-12-13 14:35:32] total 210436
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc 214736753 Dec 13 14:31 ATLAS.root_0
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc    592392 Dec 13 14:31 input.tar.gz
[2025-12-13 14:35:32] -rw-r--r-- 2 boinc boinc     15847 Dec 13 14:31 start_atlas.sh
[2025-12-13 14:35:32] -rw------- 1 boinc boinc    133120 Dec 13 14:35 result.tar.gz
14:35:33 (123371): run_atlas exited; CPU time 37.282844
14:35:33 (123371): called boinc_finish(0)

</stderr_txt>
]]>

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