Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:54 (3032652): wrapper (7.7.26015): starting
21:54:54 (3032652): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 21:54:54] Arguments: --nthreads 4
[2025-12-13 21:54:54] Threads: 4
[2025-12-13 21:54:54] Checking for CVMFS
[2025-12-13 21:54:54] No cvmfs_config command found, will try listing directly
[2025-12-13 21:54:54] CVMFS is ok
[2025-12-13 21:54:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 21:54:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 21:54:54] Further information can be found at the LHC@home message board.
[2025-12-13 21:54:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 21:54:54] Checking for apptainer binary...
[2025-12-13 21:54:54] which: no apptainer in ((null))
[2025-12-13 21:54:54] apptainer is not installed, using version from CVMFS
[2025-12-13 21:54:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 21:54:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-12-13 21:54:54] apptainer works
[2025-12-13 21:54:54] Set ATHENA_PROC_NUMBER=4
[2025-12-13 21:54:54] Set ATHENA_CORE_NUMBER=4
[2025-12-13 21:54:54] Starting ATLAS job with PandaID=6929222529
[2025-12-13 21:54:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 01:52:32]  *** The last 200 lines of the pilot log: ***
[2025-12-14 01:52:32] 2025-12-14 00:48:30,336 | INFO     | total number of processed events: 400 (read)
[2025-12-14 01:52:32] 2025-12-14 00:48:30,337 | INFO     | executing command: lscpu
[2025-12-14 01:52:32] 2025-12-14 00:48:30,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-14 01:52:32] 2025-12-14 00:48:31,124 | INFO     | monitor loop #965: job 0:6929222529 is in state 'finished'
[2025-12-14 01:52:32] 2025-12-14 00:48:31,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 01:52:32] 2025-12-14 00:48:31,470 | INFO     | time since job start (14005s) is within the limit (174528.0s)
[2025-12-14 01:52:32] 2025-12-14 00:48:33,481 | INFO     | time since job start (14007s) is within the limit (174528.0s)
[2025-12-14 01:52:32] 2025-12-14 00:48:33,628 | INFO     | monitor loop #966: job 0:6929222529 is in state 'finished'
[2025-12-14 01:52:32] 2025-12-14 00:48:33,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,019 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-14 01:52:32] 2025-12-14 00:48:35,031 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2486.0173281249995
[2025-12-14 01:52:32] 2025-12-14 00:48:35,044 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6929222529/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,045 | INFO     | extracted standard info from prmon json
[2025-12-14 01:52:32] 2025-12-14 00:48:35,045 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 01:52:32] 2025-12-14 00:48:35,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 01:52:32] 2025-12-14 00:48:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 01:52:32] 2025-12-14 00:48:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 01:52:32] 2025-12-14 00:48:35,052 | INFO     | fitting pss+swap vs Time
[2025-12-14 01:52:32] 2025-12-14 00:48:35,052 | INFO     | sum of square deviations: 3723716330.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,054 | INFO     | sum of deviations: 12101562591.999998
[2025-12-14 01:52:32] 2025-12-14 00:48:35,054 | INFO     | mean x: 1765666290.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,054 | INFO     | mean y: 2321399.8995633186
[2025-12-14 01:52:32] 2025-12-14 00:48:35,054 | INFO     | intersect: -5735849618.358269
[2025-12-14 01:52:32] 2025-12-14 00:48:35,055 | INFO     | chi2: 1.3804540137877395
[2025-12-14 01:52:32] 2025-12-14 00:48:35,055 | INFO     | sum of square deviations: 3485088600.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,056 | INFO     | sum of deviations: 11721986431.999998
[2025-12-14 01:52:32] 2025-12-14 00:48:35,057 | INFO     | mean x: 1765666137.5
[2025-12-14 01:52:32] 2025-12-14 00:48:35,057 | INFO     | mean y: 2321157.285714286
[2025-12-14 01:52:32] 2025-12-14 00:48:35,057 | INFO     | intersect: -5936441635.492881
[2025-12-14 01:52:32] 2025-12-14 00:48:35,057 | INFO     | chi2: 1.3809288718373531
[2025-12-14 01:52:32] 2025-12-14 00:48:35,057 | INFO     | current chi2=1.3809288718373531 (change=-0.03439868658215831 %)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,058 | INFO     | right removable region: 223
[2025-12-14 01:52:32] 2025-12-14 00:48:35,058 | INFO     | sum of square deviations: 3485088600.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,059 | INFO     | sum of deviations: -15924580913.5
[2025-12-14 01:52:32] 2025-12-14 00:48:35,060 | INFO     | mean x: 1765666442.5
[2025-12-14 01:52:32] 2025-12-14 00:48:35,060 | INFO     | mean y: 2339094.46875
[2025-12-14 01:52:32] 2025-12-14 00:48:35,060 | INFO     | intersect: 8070282655.456825
[2025-12-14 01:52:32] 2025-12-14 00:48:35,060 | INFO     | chi2: 0.07547124428247884
[2025-12-14 01:52:32] 2025-12-14 00:48:35,060 | INFO     | current chi2=0.07547124428247884 (change=94.53286791673719 %)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,061 | INFO     | sum of square deviations: 3256879670.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,062 | INFO     | sum of deviations: -11047886655.999989
[2025-12-14 01:52:32] 2025-12-14 00:48:35,062 | INFO     | mean x: 1765666595.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,062 | INFO     | mean y: 2335831.0821917807
[2025-12-14 01:52:32] 2025-12-14 00:48:35,063 | INFO     | intersect: 5991775537.291981
[2025-12-14 01:52:32] 2025-12-14 00:48:35,063 | INFO     | chi2: 0.06335930935498114
[2025-12-14 01:52:32] 2025-12-14 00:48:35,063 | INFO     | current chi2=0.06335930935498114 (change=16.048410282152407 %)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,063 | INFO     | left removable region: 20
[2025-12-14 01:52:32] 2025-12-14 00:48:35,063 | INFO     | sum of square deviations: 2593916542.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,065 | INFO     | sum of deviations: 310153280.0000001
[2025-12-14 01:52:32] 2025-12-14 00:48:35,065 | INFO     | mean x: 1765666717.0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,065 | INFO     | mean y: 2327422.3645320195
[2025-12-14 01:52:32] 2025-12-14 00:48:35,065 | INFO     | intersect: -208792447.83844
[2025-12-14 01:52:32] 2025-12-14 00:48:35,066 | INFO     | chi2: 0.013953999940466422
[2025-12-14 01:52:32] 2025-12-14 00:48:35,066 | INFO     | current memory leak: 0.12 B/s (using 203 data points, chi2=0.01)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,066 | INFO     | could have reported an average CPU frequency of 2517 MHz (11 samples)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | ..............................
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . Timing measurements:
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . get job = 0 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . initial setup = 1 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . payload setup = 7 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . stage-in = 0 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . payload execution = 13970 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . stage-out = 1 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | . log creation = 0 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,067 | INFO     | ..............................
[2025-12-14 01:52:32] 2025-12-14 00:48:35,213 | INFO     | 
[2025-12-14 01:52:32] 2025-12-14 00:48:35,213 | INFO     | job summary report
[2025-12-14 01:52:32] 2025-12-14 00:48:35,213 | INFO     | --------------------------------------------------
[2025-12-14 01:52:32] 2025-12-14 00:48:35,213 | INFO     | PanDA job id: 6929222529
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | task id: 47886831
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | errors: (none)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | pilot state: finished 
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | transexitcode: 0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | exeerrorcode: 0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | exeerrordiag: 
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | exitcode: 0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | exitmsg: OK
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | cpuconsumptiontime: 49331 s
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | nevents: 400
[2025-12-14 01:52:32] 2025-12-14 00:48:35,214 | INFO     | neventsw: 0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | pid: 3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | pgrp: 3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | corecount: 4
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | event service: False
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | sizes: {0: 2284000, 5: 2284262, 11: 2284318, 13981: 2315282, 13983: 2324302, 13986: 2324358, 13992: 2324680}
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | --------------------------------------------------
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | 
[2025-12-14 01:52:32] 2025-12-14 00:48:35,215 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-12-14 01:52:32] 2025-12-14 00:48:35,237 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | job 6929222529 has completed (purged errors)
[2025-12-14 01:52:32] 2025-12-14 00:48:35,240 | INFO     | overall cleanup function is called
[2025-12-14 01:52:32] 2025-12-14 00:48:36,248 | INFO     | --- collectZombieJob: --- 10, [3055300]
[2025-12-14 01:52:32] 2025-12-14 00:48:36,248 | INFO     | zombie collector waiting for pid 3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:36,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 01:52:32] 2025-12-14 00:48:36,249 | INFO     | collected zombie processes
[2025-12-14 01:52:32] 2025-12-14 00:48:36,249 | INFO     | will attempt to kill all subprocesses of pid=3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:36,634 | INFO     | process IDs to be killed: [3055300] (in reverse order)
[2025-12-14 01:52:32] 2025-12-14 00:48:36,757 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 01:52:32] 2025-12-14 00:48:36,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 01:52:32] 2025-12-14 00:48:36,771 | INFO     | did not find any defunct processes belonging to 3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:36,784 | INFO     | did not find any defunct processes belonging to 3055300
[2025-12-14 01:52:32] 2025-12-14 00:48:36,785 | INFO     | ready for new job
[2025-12-14 01:52:32] 2025-12-14 00:48:36,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 01:52:32] 2025-12-14 00:48:36,788 | INFO     | ***************************************
[2025-12-14 01:52:32] 2025-12-14 00:48:36,788 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 01:52:32] 2025-12-14 00:48:36,788 | INFO     | ***************************************
[2025-12-14 01:52:32] 2025-12-14 00:48:36,788 | INFO     | 
[2025-12-14 01:52:32] 2025-12-14 00:48:36,792 | INFO     | architecture information:
[2025-12-14 01:52:32] 2025-12-14 00:48:36,793 | INFO     | executing command: cat /etc/os-release
[2025-12-14 01:52:32] 2025-12-14 00:48:36,810 | INFO     | cat /etc/os-release:
[2025-12-14 01:52:32] NAME="CentOS Linux"
[2025-12-14 01:52:32] VERSION="7 (Core)"
[2025-12-14 01:52:32] ID="centos"
[2025-12-14 01:52:32] ID_LIKE="rhel fedora"
[2025-12-14 01:52:32] VERSION_ID="7"
[2025-12-14 01:52:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 01:52:32] ANSI_COLOR="0;31"
[2025-12-14 01:52:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 01:52:32] HOME_URL="https://www.centos.org/"
[2025-12-14 01:52:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 01:52:32] 
[2025-12-14 01:52:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 01:52:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 01:52:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 01:52:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 01:52:32] 
[2025-12-14 01:52:32] 2025-12-14 00:48:36,811 | INFO     | ***************************************
[2025-12-14 01:52:32] 2025-12-14 00:48:37,313 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-12-14 01:52:32] 2025-12-14 00:48:37,331 | INFO     | sufficient remaining disk space (685017923584 B)
[2025-12-14 01:52:32] 2025-12-14 00:48:37,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 01:52:32] 2025-12-14 00:48:37,332 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 01:52:32] 2025-12-14 00:48:37,332 | INFO     | update_server=False
[2025-12-14 01:52:32] 2025-12-14 00:48:37,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 01:52:32] 2025-12-14 00:48:37,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 01:52:32] 2025-12-14 00:48:37,333 | INFO     | aborting loop
[2025-12-14 01:52:32] 2025-12-14 00:48:37,430 | INFO     | all payload control threads have been joined
[2025-12-14 01:52:32] 2025-12-14 00:48:37,690 | INFO     | all job control threads have been joined
[2025-12-14 01:52:32] 2025-12-14 00:48:38,253 | INFO     | all data control threads have been joined
[2025-12-14 01:52:32] 2025-12-14 00:48:38,337 | INFO     | [job] retrieve thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,338 | INFO     | [job] job monitor thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,435 | INFO     | [payload] control thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,532 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,582 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 01:52:32] 2025-12-14 00:48:38,695 | INFO     | [job] control thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,728 | INFO     | [data] copytool_in thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,821 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:38,872 | INFO     | [payload] failed_post thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:39,258 | INFO     | [data] control thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:39,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 01:52:32] 2025-12-14 00:48:39,340 | INFO     | [job] validate thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:39,649 | INFO     | [payload] validate_post thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:39,757 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:40,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 01:52:32] 2025-12-14 00:48:40,623 | INFO     | [data] copytool_out thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:41,193 | INFO     | [job] queue monitor thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:48:43,267 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 01:52:32] 2025-12-14 00:49:07,052 | INFO     | PID=3038468 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 01:52:32] 2025-12-14 00:49:07,052 | INFO     | .. there are 5 such processes running
[2025-12-14 01:52:32] 2025-12-14 00:49:07,053 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 01:52:32] 2025-12-14 00:49:07,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 01:52:32] 2025-12-14 00:49:07,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 01:52:32] 2025-12-14 00:49:29,948 | INFO     | [monitor] cgroup control has ended
[2025-12-14 01:52:32] 2025-12-14 00:49:30,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22933745485632)>', '<ExcThread(monitor, started 22933439231744)>']
[2025-12-14 01:52:32] 2025-12-14 00:49:31,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 01:52:32] 2025-12-14 00:49:31,172 | INFO     | [monitor] control thread has ended
[2025-12-14 01:52:32] 2025-12-14 00:49:35,309 | INFO     | all workflow threads have been joined
[2025-12-14 01:52:32] 2025-12-14 00:49:35,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 01:52:32] 2025-12-14 00:49:35,310 | INFO     | traces error code: 0
[2025-12-14 01:52:32] 2025-12-14 00:49:35,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 01:52:32] 2025-12-14 00:49:35,503 [wrapper] ==== pilot stdout END ====
[2025-12-14 01:52:32] 2025-12-14 00:49:35,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 01:52:32] 2025-12-14 00:49:35,509 [wrapper] pilotpid: 3038468
[2025-12-14 01:52:32] 2025-12-14 00:49:35,513 [wrapper] Pilot exit status: 0
[2025-12-14 01:52:32] 2025-12-14 00:49:35,529 [wrapper] pandaids: 6929222529
[2025-12-14 01:52:32] 2025-12-14 00:49:35,611 [wrapper] cleanup supervisor_pilot 3318152 3038469
[2025-12-14 01:52:32] 2025-12-14 00:49:35,616 [wrapper] Test setup, not cleaning
[2025-12-14 01:52:32] 2025-12-14 00:49:35,619 [wrapper] apfmon messages muted
[2025-12-14 01:52:32] 2025-12-14 00:49:35,622 [wrapper] ==== wrapper stdout END ====
[2025-12-14 01:52:32] 2025-12-14 00:49:35,625 [wrapper] ==== wrapper stderr END ====
[2025-12-14 01:52:32]  *** Error codes and diagnostics ***
[2025-12-14 01:52:32]     "exeErrorCode": 0,
[2025-12-14 01:52:32]     "exeErrorDiag": "",
[2025-12-14 01:52:32]     "pilotErrorCode": 0,
[2025-12-14 01:52:32]     "pilotErrorDiag": "",
[2025-12-14 01:52:32]  *** Listing of results directory ***
[2025-12-14 01:52:32] total 336880
[2025-12-14 01:52:32] -rwx------ 1 boinc boinc     36322 Dec 13 09:51 runpilot2-wrapper.sh
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc      5112 Dec 13 09:53 queuedata.json
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc       100 Dec 13 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 01:52:32] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 21:54 run_atlas
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc       105 Dec 13 21:54 job.xml
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc      6638 Dec 13 21:54 init_data.xml
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc 189554522 Dec 13 21:54 EVNT.47886829._000180.pool.root.1
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc     15847 Dec 13 21:54 start_atlas.sh
[2025-12-14 01:52:32] drwxrwx--x 2 boinc boinc      4096 Dec 13 21:54 shared
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc    592414 Dec 13 21:54 input.tar.gz
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc         0 Dec 13 21:54 boinc_lockfile
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc      2537 Dec 13 21:54 pandaJob.out
[2025-12-14 01:52:32] -rw------- 1 boinc boinc    991736 Dec 13 21:55 agis_schedconf.cvmfs.json
[2025-12-14 01:52:32] drwx------ 5 boinc boinc      4096 Dec 13 21:55 pilot3
[2025-12-14 01:52:32] -rw------- 1 boinc boinc 146795366 Dec 14 01:47 HITS.47886831._004496.pool.root.1
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc       529 Dec 14 01:48 boinc_task_state.xml
[2025-12-14 01:52:32] -rw------- 1 boinc boinc      1048 Dec 14 01:48 memory_monitor_summary.json
[2025-12-14 01:52:32] -rw------- 1 boinc boinc   1516240 Dec 14 01:48 agis_ddmendpoints.agis.ALL.json
[2025-12-14 01:52:32] -rw------- 1 boinc boinc    401783 Dec 14 01:48 log.47886831._004496.job.log.tgz.1
[2025-12-14 01:52:32] -rw------- 1 boinc boinc      7826 Dec 14 01:48 heartbeat.json
[2025-12-14 01:52:32] -rw------- 1 boinc boinc        95 Dec 14 01:49 pilot_heartbeat.json
[2025-12-14 01:52:32] -rw------- 1 boinc boinc      4833 Dec 14 01:49 pilotlog.txt
[2025-12-14 01:52:32] -rw------- 1 boinc boinc   1949119 Dec 14 01:49 log.47886831._004496.job.log.1
[2025-12-14 01:52:32] -rw------- 1 boinc boinc       357 Dec 14 01:49 output.list
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc       620 Dec 14 01:49 runtime_log
[2025-12-14 01:52:32] -rw------- 1 boinc boinc   2365440 Dec 14 01:49 result.tar.gz
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc      9206 Dec 14 01:49 runtime_log.err
[2025-12-14 01:52:32] -rw------- 1 boinc boinc       666 Dec 14 01:49 gAKKDmKWao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyRSKDmwLNkVn.diag
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc        26 Dec 14 01:52 wrapper_checkpoint.txt
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc      8192 Dec 14 01:52 boinc_mmap_file
[2025-12-14 01:52:32] -rw-r--r-- 1 boinc boinc     21158 Dec 14 01:52 stderr.txt
[2025-12-14 01:52:32] HITS file was successfully produced:
[2025-12-14 01:52:32] -rw------- 1 boinc boinc 146795366 Dec 14 01:47 shared/HITS.pool.root.1
[2025-12-14 01:52:32]  *** Contents of shared directory: ***
[2025-12-14 01:52:32] total 331384
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc 189554522 Dec 13 21:54 ATLAS.root_0
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc     15847 Dec 13 21:54 start_atlas.sh
[2025-12-14 01:52:32] -rw-r--r-- 2 boinc boinc    592414 Dec 13 21:54 input.tar.gz
[2025-12-14 01:52:32] -rw------- 1 boinc boinc 146795366 Dec 14 01:47 HITS.pool.root.1
[2025-12-14 01:52:32] -rw------- 1 boinc boinc   2365440 Dec 14 01:49 result.tar.gz
01:52:34 (3032652): run_atlas exited; CPU time 49946.245818
01:52:34 (3032652): called boinc_finish(0)

</stderr_txt>
]]>

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