Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:45 (12657): wrapper (7.7.26015): starting
05:19:45 (12657): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 05:19:45] Arguments: --nthreads 12
[2025-12-13 05:19:45] Threads: 12
[2025-12-13 05:19:45] Checking for CVMFS
[2025-12-13 05:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 05:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 05:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 05:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 05:19:46] 2.11.2.0 2998 127746 99920 153957 3 9 12753571 20275201 1 130560 0 52498016 99.954 5681871 35279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 05:19:46] CVMFS is ok
[2025-12-13 05:19:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 05:19:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 05:19:46] Further information can be found at the LHC@home message board.
[2025-12-13 05:19:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 05:19:46] Checking for apptainer binary...
[2025-12-13 05:19:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 05:19:46] Running /usr/bin/apptainer --version
[2025-12-13 05:19:46] apptainer version 1.3.2-1.el7
[2025-12-13 05:19:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 05:19:47] c-205-12.aglt2.org
[2025-12-13 05:19:47] apptainer works
[2025-12-13 05:19:47] Set ATHENA_PROC_NUMBER=12
[2025-12-13 05:19:47] Set ATHENA_CORE_NUMBER=12
[2025-12-13 05:19:47] Starting ATLAS job with PandaID=6929222292
[2025-12-13 05:19:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:35:18]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:35:18]  status_code=0
[2025-12-13 06:35:18]  storage_token=
[2025-12-13 06:35:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929222292/log.47886831._004324.job.log.tgz.1
[2025-12-13 06:35:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/fd/log.47886831._004324.job.log.tgz.1
[2025-12-13 06:35:18]  workdir=None
[2025-12-13 06:35:18] ]
[2025-12-13 06:35:18] 2025-12-13 11:34:36,186 | INFO     | transferring file log.47886831._004324.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929222292/log.47886831._004324.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 06:35:18] 2025-12-13 11:34:36,186 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929222292/log.47886831._004324.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._004324.job
[2025-12-13 06:35:18] 2025-12-13 11:34:36,210 | INFO     | adding to output.list: log.47886831._004324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/fd/log.47886831._004324.job.log.tg
[2025-12-13 06:35:18] 2025-12-13 11:34:36,211 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 06:35:18] 2025-12-13 11:34:36,211 | INFO     | summary of transferred files:
[2025-12-13 06:35:18] 2025-12-13 11:34:36,211 | INFO     |  -- lfn=log.47886831._004324.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 06:35:18] 2025-12-13 11:34:36,211 | INFO     | stage-out finished correctly
[2025-12-13 06:35:18] 2025-12-13 11:34:37,035 | INFO     | time since job start (4475s) is within the limit (174528.0s)
[2025-12-13 06:35:18] 2025-12-13 11:34:37,862 | INFO     | monitor loop #335: job 0:6929222292 is in state 'finished'
[2025-12-13 06:35:18] 2025-12-13 11:34:37,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:35:18] 2025-12-13 11:34:38,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 06:35:18] 2025-12-13 11:34:39,041 | INFO     | time since job start (4477s) is within the limit (174528.0s)
[2025-12-13 06:35:18] 2025-12-13 11:34:40,365 | INFO     | monitor loop #336: job 0:6929222292 is in state 'finished'
[2025-12-13 06:35:18] 2025-12-13 11:34:40,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:35:18] 2025-12-13 11:34:41,046 | INFO     | time since job start (4479s) is within the limit (174528.0s)
[2025-12-13 06:35:18] 2025-12-13 11:34:41,050 | INFO     | job 6929222292 has state=finished
[2025-12-13 06:35:18] 2025-12-13 11:34:41,050 | INFO     | preparing for final server update for job 6929222292 in state='finished'
[2025-12-13 06:35:18] 2025-12-13 11:34:41,050 | INFO     | this job has now completed (state=finished)
[2025-12-13 06:35:18] 2025-12-13 11:34:41,050 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 06:35:18] 2025-12-13 11:34:41,051 | INFO     | log transfer has been attempted: DONE
[2025-12-13 06:35:18] 2025-12-13 11:34:41,051 | INFO     | job 6929222292 has finished - writing final server update
[2025-12-13 06:35:18] 2025-12-13 11:34:41,051 | INFO     | total number of processed events: 400 (read)
[2025-12-13 06:35:18] 2025-12-13 11:34:41,052 | INFO     | executing command: lscpu
[2025-12-13 06:35:18] 2025-12-13 11:34:41,081 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 06:35:18] 2025-12-13 11:34:42,874 | INFO     | monitor loop #337: job 0:6929222292 is in state 'finished'
[2025-12-13 06:35:18] 2025-12-13 11:34:42,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:35:18] 2025-12-13 11:34:43,051 | INFO     | time since job start (4481s) is within the limit (174528.0s)
[2025-12-13 06:35:18] 2025-12-13 11:34:44,174 | INFO     | PID=16449 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 06:35:18] 2025-12-13 11:34:45,175 | INFO     | time since job start (4483s) is within the limit (174528.0s)
[2025-12-13 06:35:18] 2025-12-13 11:34:45,375 | INFO     | monitor loop #338: job 0:6929222292 is in state 'finished'
[2025-12-13 06:35:18] 2025-12-13 11:34:45,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:35:18] 2025-12-13 11:34:46,912 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 06:35:18] 2025-12-13 11:34:46,916 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-12-13 06:35:18] 2025-12-13 11:34:46,918 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929222292/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:35:18] 2025-12-13 11:34:46,919 | INFO     | extracted standard info from prmon json
[2025-12-13 06:35:18] 2025-12-13 11:34:46,920 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:35:18] 2025-12-13 11:34:46,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:35:18] 2025-12-13 11:34:46,920 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:35:18] 2025-12-13 11:34:46,920 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:35:18] 2025-12-13 11:34:46,922 | INFO     | fitting pss+swap vs Time
[2025-12-13 06:35:18] 2025-12-13 11:34:46,922 | INFO     | sum of square deviations: 89127252.5
[2025-12-13 06:35:18] 2025-12-13 11:34:46,922 | INFO     | sum of deviations: -6075234183.0
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | mean x: 1765623518.5
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | mean y: 2824254.9696969697
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | intersect: 120354075449.43384
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | chi2: 0.12823464584345137
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | current memory leak: -68.16 B/s (using 66 data points, chi2=0.13)
[2025-12-13 06:35:18] 2025-12-13 11:34:46,923 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | ..............................
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . Timing measurements:
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . get job = 0 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . initial setup = 2 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . payload setup = 7 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . stage-in = 0 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . payload execution = 4445 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . stage-out = 0 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | . log creation = 0 s
[2025-12-13 06:35:18] 2025-12-13 11:34:46,924 | INFO     | ..............................
[2025-12-13 06:35:18] 2025-12-13 11:34:47,003 | INFO     | 
[2025-12-13 06:35:18] 2025-12-13 11:34:47,003 | INFO     | job summary report
[2025-12-13 06:35:18] 2025-12-13 11:34:47,003 | INFO     | --------------------------------------------------
[2025-12-13 06:35:18] 2025-12-13 11:34:47,003 | INFO     | PanDA job id: 6929222292
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | task id: 47886831
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | errors: (none)
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | pilot state: finished 
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | transexitcode: 0
[2025-12-13 06:35:18] 2025-12-13 11:34:47,004 | INFO     | exeerrorcode: 0
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | exeerrordiag: 
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | exitcode: 0
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | exitmsg: OK
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | cpuconsumptiontime: 47239 s
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | nevents: 400
[2025-12-13 06:35:18] 2025-12-13 11:34:47,005 | INFO     | neventsw: 0
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | pid: 24073
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | pgrp: 24073
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | corecount: 12
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | event service: False
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | sizes: {0: 2283989, 5: 2284251, 11: 2284307, 4455: 2310375, 4456: 2310374, 4457: 2319428, 4460: 2319612, 4468: 2319806}
[2025-12-13 06:35:18] 2025-12-13 11:34:47,006 | INFO     | --------------------------------------------------
[2025-12-13 06:35:18] 2025-12-13 11:34:47,007 | INFO     | 
[2025-12-13 06:35:18] 2025-12-13 11:34:47,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 06:35:18] 2025-12-13 11:34:47,032 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,032 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:35:18] 2025-12-13 11:34:47,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:35:18] 2025-12-13 11:34:47,036 | INFO     | job 6929222292 has completed (purged errors)
[2025-12-13 06:35:18] 2025-12-13 11:34:47,036 | INFO     | overall cleanup function is called
[2025-12-13 06:35:18] 2025-12-13 11:34:48,045 | INFO     | --- collectZombieJob: --- 10, [24073]
[2025-12-13 06:35:18] 2025-12-13 11:34:48,045 | INFO     | zombie collector waiting for pid 24073
[2025-12-13 06:35:18] 2025-12-13 11:34:48,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:35:18] 2025-12-13 11:34:48,045 | INFO     | collected zombie processes
[2025-12-13 06:35:18] 2025-12-13 11:34:48,045 | INFO     | will attempt to kill all subprocesses of pid=24073
[2025-12-13 06:35:18] 2025-12-13 11:34:48,138 | INFO     | process IDs to be killed: [24073] (in reverse order)
[2025-12-13 06:35:18] 2025-12-13 11:34:48,191 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:35:18] 2025-12-13 11:34:48,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:35:18] 2025-12-13 11:34:48,195 | INFO     | did not find any defunct processes belonging to 24073
[2025-12-13 06:35:18] 2025-12-13 11:34:48,198 | INFO     | did not find any defunct processes belonging to 24073
[2025-12-13 06:35:18] 2025-12-13 11:34:48,199 | INFO     | ready for new job
[2025-12-13 06:35:18] 2025-12-13 11:34:48,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:35:18] 2025-12-13 11:34:48,200 | INFO     | ***************************************
[2025-12-13 06:35:18] 2025-12-13 11:34:48,200 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:35:18] 2025-12-13 11:34:48,201 | INFO     | ***************************************
[2025-12-13 06:35:18] 2025-12-13 11:34:48,201 | INFO     | 
[2025-12-13 06:35:18] 2025-12-13 11:34:48,201 | INFO     | architecture information:
[2025-12-13 06:35:18] 2025-12-13 11:34:48,202 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:35:18] 2025-12-13 11:34:48,217 | INFO     | cat /etc/os-release:
[2025-12-13 06:35:18] NAME="CentOS Linux"
[2025-12-13 06:35:18] VERSION="7 (Core)"
[2025-12-13 06:35:18] ID="centos"
[2025-12-13 06:35:18] ID_LIKE="rhel fedora"
[2025-12-13 06:35:18] VERSION_ID="7"
[2025-12-13 06:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:35:18] ANSI_COLOR="0;31"
[2025-12-13 06:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:35:18] HOME_URL="https://www.centos.org/"
[2025-12-13 06:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:35:18] 
[2025-12-13 06:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:35:18] 
[2025-12-13 06:35:18] 2025-12-13 11:34:48,217 | INFO     | ***************************************
[2025-12-13 06:35:18] 2025-12-13 11:34:48,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 06:35:18] 2025-12-13 11:34:48,738 | INFO     | sufficient remaining disk space (29458694144 B)
[2025-12-13 06:35:18] 2025-12-13 11:34:48,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:35:18] 2025-12-13 11:34:48,739 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:35:18] 2025-12-13 11:34:48,739 | INFO     | update_server=False
[2025-12-13 06:35:18] 2025-12-13 11:34:48,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:35:18] 2025-12-13 11:34:48,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:35:18] 2025-12-13 11:34:48,887 | INFO     | all payload control threads have been joined
[2025-12-13 06:35:18] 2025-12-13 11:34:48,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:35:18] 2025-12-13 11:34:48,887 | INFO     | aborting loop
[2025-12-13 06:35:18] 2025-12-13 11:34:48,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:35:18] 2025-12-13 11:34:49,246 | INFO     | all data control threads have been joined
[2025-12-13 06:35:18] 2025-12-13 11:34:49,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:35:18] 2025-12-13 11:34:49,745 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:49,745 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:49,873 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:49,892 | INFO     | [payload] control thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:49,893 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,244 | INFO     | [job] validate thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,252 | INFO     | [data] control thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,332 | INFO     | all job control threads have been joined
[2025-12-13 06:35:18] 2025-12-13 11:34:50,386 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,560 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,835 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:50,902 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:51,231 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:51,312 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:51,338 | INFO     | [job] control thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:52,958 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:34:59,088 | INFO     | job.realtimelogging is not enabled
[2025-12-13 06:35:18] 2025-12-13 11:34:59,925 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-12-13 06:35:18] 2025-12-13 11:35:00,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:35:18] 2025-12-13 11:35:09,250 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:35:18] 2025-12-13 11:35:09,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090816292672)>', '<ExcThread(monitor, started 140089418053376)>']
[2025-12-13 06:35:18] 2025-12-13 11:35:14,292 | INFO     | all workflow threads have been joined
[2025-12-13 06:35:18] 2025-12-13 11:35:14,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:35:18] 2025-12-13 11:35:14,292 | INFO     | traces error code: 0
[2025-12-13 06:35:18] 2025-12-13 11:35:14,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:35:18] 2025-12-13 11:35:18,380 | INFO     | PID=16449 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 06:35:18] 2025-12-13 11:35:18,381 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:35:18] 2025-12-13 11:35:18,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:35:18] 2025-12-13 11:35:18,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:35:18] 2025-12-13 11:35:18,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:35:18] 2025-12-13 11:35:18,381 | INFO     | [monitor] control thread has ended
[2025-12-13 06:35:18] 2025-12-13 11:35:18,466 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:35:18] 2025-12-13 11:35:18,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:35:18] 2025-12-13 11:35:18,474 [wrapper] pilotpid: 16449
[2025-12-13 06:35:18] 2025-12-13 11:35:18,478 [wrapper] Pilot exit status: 0
[2025-12-13 06:35:18] 2025-12-13 11:35:18,493 [wrapper] pandaids: 6929222292
[2025-12-13 06:35:18] 2025-12-13 11:35:18,533 [wrapper] cleanup supervisor_pilot 20811 16450
[2025-12-13 06:35:18] 2025-12-13 11:35:18,538 [wrapper] Test setup, not cleaning
[2025-12-13 06:35:18] 2025-12-13 11:35:18,542 [wrapper] apfmon messages muted
[2025-12-13 06:35:18] 2025-12-13 11:35:18,546 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:35:18] 2025-12-13 11:35:18,550 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:35:18]  *** Error codes and diagnostics ***
[2025-12-13 06:35:18]     "exeErrorCode": 0,
[2025-12-13 06:35:18]     "exeErrorDiag": "",
[2025-12-13 06:35:18]     "pilotErrorCode": 0,
[2025-12-13 06:35:18]     "pilotErrorDiag": "",
[2025-12-13 06:35:18]  *** Listing of results directory ***
[2025-12-13 06:35:18] total 333836
[2025-12-13 06:35:18] -rwx------ 1 boincer umatlas     36322 Dec 13 03:50 runpilot2-wrapper.sh
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:51 pilot3.tar.gz
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:53 queuedata.json
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas       100 Dec 13 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:35:18] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 05:19 run_atlas
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas       105 Dec 13 05:19 job.xml
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas 192719173 Dec 13 05:19 EVNT.47886829._000173.pool.root.1
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 05:19 start_atlas.sh
[2025-12-13 06:35:18] drwxrwx--x 2 boincer umatlas      4096 Dec 13 05:19 shared
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas    592419 Dec 13 05:19 input.tar.gz
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas         0 Dec 13 05:19 boinc_lockfile
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas      2537 Dec 13 05:19 pandaJob.out
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas        57 Dec 13 05:19 setup.sh.local
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas    991728 Dec 13 05:20 agis_schedconf.cvmfs.json
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas   1516240 Dec 13 05:20 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:35:18] drwx------ 5 boincer umatlas      4096 Dec 13 05:20 pilot3
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 06:31 init_data.xml
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas 143124042 Dec 13 06:34 HITS.47886831._004324.pool.root.1
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas       529 Dec 13 06:34 boinc_task_state.xml
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas      1046 Dec 13 06:34 memory_monitor_summary.json
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas    390318 Dec 13 06:34 log.47886831._004324.job.log.tgz.1
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas      7849 Dec 13 06:34 heartbeat.json
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 06:34 boinc_mmap_file
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas        27 Dec 13 06:34 wrapper_checkpoint.txt
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas       745 Dec 13 06:35 pilotlog.txt
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas        95 Dec 13 06:35 pilot_heartbeat.json
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas    651421 Dec 13 06:35 log.47886831._004324.job.log.1
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas       357 Dec 13 06:35 output.list
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas       620 Dec 13 06:35 runtime_log
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas   1064960 Dec 13 06:35 result.tar.gz
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas       659 Dec 13 06:35 B0aKDm8Vao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7KOKDmiIZkQm.diag
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas      9344 Dec 13 06:35 runtime_log.err
[2025-12-13 06:35:18] -rw-r--r-- 1 boincer umatlas     22231 Dec 13 06:35 stderr.txt
[2025-12-13 06:35:18] HITS file was successfully produced:
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas 143124042 Dec 13 06:34 shared/HITS.pool.root.1
[2025-12-13 06:35:18]  *** Contents of shared directory: ***
[2025-12-13 06:35:18] total 329616
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas 192719173 Dec 13 05:19 ATLAS.root_0
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 05:19 start_atlas.sh
[2025-12-13 06:35:18] -rw-r--r-- 2 boincer umatlas    592419 Dec 13 05:19 input.tar.gz
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas 143124042 Dec 13 06:34 HITS.pool.root.1
[2025-12-13 06:35:18] -rw------- 1 boincer umatlas   1064960 Dec 13 06:35 result.tar.gz
06:35:19 (12657): run_atlas exited; CPU time 47202.783793
06:35:19 (12657): called boinc_finish(0)

</stderr_txt>
]]>

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