Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:04:03 (13666): wrapper (7.7.26015): starting
16:04:03 (13666): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 16:04:03] Arguments: --nthreads 8
[2025-12-13 16:04:03] Threads: 8
[2025-12-13 16:04:03] Checking for CVMFS
[2025-12-13 16:04:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 16:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 16:04:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 16:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 16:04:06] 2.11.2.0 1415 108825 143652 153963 1 95 22970723 25165824 4152 130560 313 33390939 99.827 24776674 1834 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 16:04:06] CVMFS is ok
[2025-12-13 16:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 16:04:06] Checking for apptainer binary...
[2025-12-13 16:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 16:04:06] Running /usr/bin/apptainer --version
[2025-12-13 16:04:07] apptainer version 1.3.2-1.el7
[2025-12-13 16:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 16:04:21] cg-vwn377.simple-grid.lan
[2025-12-13 16:04:21] apptainer works
[2025-12-13 16:04:21] Set ATHENA_PROC_NUMBER=8
[2025-12-13 16:04:21] Set ATHENA_CORE_NUMBER=8
[2025-12-13 16:04:21] Starting ATLAS job with PandaID=6929222269
[2025-12-13 16:04:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 20:45:34]  *** The last 200 lines of the pilot log: ***
[2025-12-13 20:45:34] 2025-12-13 19:44:47,997 | INFO     | monitor loop #1201: job 0:6929222269 is in state 'finished'
[2025-12-13 20:45:34] 2025-12-13 19:44:47,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:45:34] 2025-12-13 19:44:48,181 | INFO     | time since job start (16613s) is within the limit (174528.0s)
[2025-12-13 20:45:34] 2025-12-13 19:44:50,187 | INFO     | time since job start (16615s) is within the limit (174528.0s)
[2025-12-13 20:45:34] 2025-12-13 19:44:50,510 | INFO     | monitor loop #1202: job 0:6929222269 is in state 'finished'
[2025-12-13 20:45:34] 2025-12-13 19:44:50,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,194 | INFO     | time since job start (16617s) is within the limit (174528.0s)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,558 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 20:45:34] 2025-12-13 19:44:52,559 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 20:45:34] 2025-12-13 19:44:52,561 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6929222269/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,562 | INFO     | extracted standard info from prmon json
[2025-12-13 20:45:34] 2025-12-13 19:44:52,562 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 20:45:34] 2025-12-13 19:44:52,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 20:45:34] 2025-12-13 19:44:52,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 20:45:34] 2025-12-13 19:44:52,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 20:45:34] 2025-12-13 19:44:52,575 | INFO     | fitting pss+swap vs Time
[2025-12-13 20:45:34] 2025-12-13 19:44:52,576 | INFO     | sum of square deviations: 5705372090.0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,578 | INFO     | sum of deviations: 7403165661.500019
[2025-12-13 20:45:34] 2025-12-13 19:44:52,578 | INFO     | mean x: 1765646945.5
[2025-12-13 20:45:34] 2025-12-13 19:44:52,579 | INFO     | mean y: 2478996.9734848486
[2025-12-13 20:45:34] 2025-12-13 19:44:52,579 | INFO     | intersect: -2288585745.353951
[2025-12-13 20:45:34] 2025-12-13 19:44:52,579 | INFO     | chi2: 5.004833653165426
[2025-12-13 20:45:34] 2025-12-13 19:44:52,580 | INFO     | sum of square deviations: 5387301010.0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,582 | INFO     | sum of deviations: 24758058410.00002
[2025-12-13 20:45:34] 2025-12-13 19:44:52,582 | INFO     | mean x: 1765646793.0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,583 | INFO     | mean y: 2487189.2123552123
[2025-12-13 20:45:34] 2025-12-13 19:44:52,583 | INFO     | intersect: -8111777514.278422
[2025-12-13 20:45:34] 2025-12-13 19:44:52,583 | INFO     | chi2: 4.262107108083741
[2025-12-13 20:45:34] 2025-12-13 19:44:52,583 | INFO     | current chi2=4.262107108083741 (change=14.840184440734205 %)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,583 | INFO     | right removable region: 258
[2025-12-13 20:45:34] 2025-12-13 19:44:52,584 | INFO     | sum of square deviations: 5387301010.0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,586 | INFO     | sum of deviations: -74784486346.00002
[2025-12-13 20:45:34] 2025-12-13 19:44:52,586 | INFO     | mean x: 1765647098.0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,586 | INFO     | mean y: 2518339.131274131
[2025-12-13 20:45:34] 2025-12-13 19:44:52,587 | INFO     | intersect: 24512567257.343765
[2025-12-13 20:45:34] 2025-12-13 19:44:52,587 | INFO     | chi2: 1.2740873644044828
[2025-12-13 20:45:34] 2025-12-13 19:44:52,587 | INFO     | current chi2=1.2740873644044828 (change=74.5428629061696 %)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,588 | INFO     | sum of square deviations: 5081276667.5
[2025-12-13 20:45:34] 2025-12-13 19:44:52,606 | INFO     | sum of deviations: -89907239431.00002
[2025-12-13 20:45:34] 2025-12-13 19:44:52,606 | INFO     | mean x: 1765647250.5
[2025-12-13 20:45:34] 2025-12-13 19:44:52,606 | INFO     | mean y: 2525817.748031496
[2025-12-13 20:45:34] 2025-12-13 19:44:52,607 | INFO     | intersect: 31243585986.096043
[2025-12-13 20:45:34] 2025-12-13 19:44:52,607 | INFO     | chi2: 1.0401450919974689
[2025-12-13 20:45:34] 2025-12-13 19:44:52,607 | INFO     | current chi2=1.0401450919974689 (change=18.361556588889034 %)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,607 | INFO     | left removable region: 20
[2025-12-13 20:45:34] 2025-12-13 19:44:52,608 | INFO     | sum of square deviations: 4180243959.5
[2025-12-13 20:45:34] 2025-12-13 19:44:52,610 | INFO     | sum of deviations: -57900172027.99999
[2025-12-13 20:45:34] 2025-12-13 19:44:52,610 | INFO     | mean x: 1765647372.5
[2025-12-13 20:45:34] 2025-12-13 19:44:52,610 | INFO     | mean y: 2528082.4789915965
[2025-12-13 20:45:34] 2025-12-13 19:44:52,610 | INFO     | intersect: 24458346355.04797
[2025-12-13 20:45:34] 2025-12-13 19:44:52,610 | INFO     | chi2: 0.23624566264284508
[2025-12-13 20:45:34] 2025-12-13 19:44:52,611 | INFO     | current memory leak: -13.85 B/s (using 238 data points, chi2=0.24)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,611 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,611 | INFO     | ..............................
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . Timing measurements:
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . get job = 0 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . initial setup = 4 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . payload setup = 129 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . stage-in = 0 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . payload execution = 16209 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . stage-out = 3 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | . log creation = 1 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,612 | INFO     | ..............................
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | 
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | job summary report
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | --------------------------------------------------
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | PanDA job id: 6929222269
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | task id: 47886831
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | errors: (none)
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | pilot state: finished 
[2025-12-13 20:45:34] 2025-12-13 19:44:52,792 | INFO     | transexitcode: 0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | exeerrorcode: 0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | exeerrordiag: 
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | exitcode: 0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | exitmsg: OK
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | cpuconsumptiontime: 59862 s
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | nevents: 400
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | neventsw: 0
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | pid: 24137
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | pgrp: 24137
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | corecount: 8
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | event service: False
[2025-12-13 20:45:34] 2025-12-13 19:44:52,793 | INFO     | sizes: {0: 2283161, 1: 2284017, 2: 2284017, 13: 2284045, 23: 2284101, 34: 2284129, 45: 2284285, 56: 2284313, 66: 2284341, 77: 2284369, 86: 2284687, 88: 2284995, 16
[2025-12-13 20:45:34] 2025-12-13 19:44:52,794 | INFO     | --------------------------------------------------
[2025-12-13 20:45:34] 2025-12-13 19:44:52,794 | INFO     | 
[2025-12-13 20:45:34] 2025-12-13 19:44:52,794 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-13 20:45:34] 2025-12-13 19:44:53,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,513 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,513 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,513 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 20:45:34] 2025-12-13 19:44:53,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 20:45:34] 2025-12-13 19:44:53,515 | INFO     | job 6929222269 has completed (purged errors)
[2025-12-13 20:45:34] 2025-12-13 19:44:53,515 | INFO     | overall cleanup function is called
[2025-12-13 20:45:34] 2025-12-13 19:44:54,524 | INFO     | --- collectZombieJob: --- 10, [24137]
[2025-12-13 20:45:34] 2025-12-13 19:44:54,524 | INFO     | zombie collector waiting for pid 24137
[2025-12-13 20:45:34] 2025-12-13 19:44:54,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 20:45:34] 2025-12-13 19:44:54,525 | INFO     | collected zombie processes
[2025-12-13 20:45:34] 2025-12-13 19:44:54,525 | INFO     | will attempt to kill all subprocesses of pid=24137
[2025-12-13 20:45:34] 2025-12-13 19:44:54,664 | INFO     | process IDs to be killed: [24137] (in reverse order)
[2025-12-13 20:45:34] 2025-12-13 19:44:55,269 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 20:45:34] 2025-12-13 19:44:55,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 20:45:34] 2025-12-13 19:44:55,275 | INFO     | did not find any defunct processes belonging to 24137
[2025-12-13 20:45:34] 2025-12-13 19:44:55,278 | INFO     | did not find any defunct processes belonging to 24137
[2025-12-13 20:45:34] 2025-12-13 19:44:55,278 | INFO     | ready for new job
[2025-12-13 20:45:34] 2025-12-13 19:44:55,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 20:45:34] 2025-12-13 19:44:55,280 | INFO     | ***************************************
[2025-12-13 20:45:34] 2025-12-13 19:44:55,280 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 20:45:34] 2025-12-13 19:44:55,281 | INFO     | ***************************************
[2025-12-13 20:45:34] 2025-12-13 19:44:55,281 | INFO     | 
[2025-12-13 20:45:34] 2025-12-13 19:44:55,283 | INFO     | pilot is running in a VM
[2025-12-13 20:45:34] 2025-12-13 19:44:55,284 | INFO     | architecture information:
[2025-12-13 20:45:34] 2025-12-13 19:44:55,294 | INFO     | executing command: cat /etc/os-release
[2025-12-13 20:45:34] 2025-12-13 19:44:55,458 | INFO     | cat /etc/os-release:
[2025-12-13 20:45:34] NAME="CentOS Linux"
[2025-12-13 20:45:34] VERSION="7 (Core)"
[2025-12-13 20:45:34] ID="centos"
[2025-12-13 20:45:34] ID_LIKE="rhel fedora"
[2025-12-13 20:45:34] VERSION_ID="7"
[2025-12-13 20:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 20:45:34] ANSI_COLOR="0;31"
[2025-12-13 20:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 20:45:34] HOME_URL="https://www.centos.org/"
[2025-12-13 20:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 20:45:34] 
[2025-12-13 20:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 20:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 20:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 20:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 20:45:34] 
[2025-12-13 20:45:34] 2025-12-13 19:44:55,459 | INFO     | ***************************************
[2025-12-13 20:45:34] 2025-12-13 19:44:55,962 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-13 20:45:34] 2025-12-13 19:44:56,199 | INFO     | sufficient remaining disk space (496756588544 B)
[2025-12-13 20:45:34] 2025-12-13 19:44:56,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 20:45:34] 2025-12-13 19:44:56,200 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 20:45:34] 2025-12-13 19:44:56,200 | INFO     | update_server=False
[2025-12-13 20:45:34] 2025-12-13 19:44:56,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 20:45:34] 2025-12-13 19:44:56,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 20:45:34] 2025-12-13 19:44:56,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:45:34] 2025-12-13 19:44:56,530 | INFO     | aborting loop
[2025-12-13 20:45:34] 2025-12-13 19:44:56,784 | INFO     | all payload control threads have been joined
[2025-12-13 20:45:34] 2025-12-13 19:44:57,205 | INFO     | all data control threads have been joined
[2025-12-13 20:45:34] 2025-12-13 19:44:57,206 | INFO     | [job] retrieve thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:57,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 20:45:34] 2025-12-13 19:44:57,536 | INFO     | [job] job monitor thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:57,726 | INFO     | [payload] validate_post thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:57,790 | INFO     | [payload] control thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:57,800 | INFO     | all job control threads have been joined
[2025-12-13 20:45:34] 2025-12-13 19:44:57,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 20:45:34] 2025-12-13 19:44:57,848 | INFO     | [data] copytool_in thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,068 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,211 | INFO     | [data] control thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,570 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,659 | INFO     | [job] validate thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,681 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,708 | INFO     | [payload] failed_post thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,806 | INFO     | [job] control thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:58,814 | INFO     | [job] queue monitor thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:44:59,483 | INFO     | [data] copytool_out thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:45:00,210 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:45:07,140 | INFO     | job.realtimelogging is not enabled
[2025-12-13 20:45:34] 2025-12-13 19:45:08,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 20:45:34] 2025-12-13 19:45:23,830 | INFO     | [monitor] cgroup control has ended
[2025-12-13 20:45:34] 2025-12-13 19:45:25,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408551700288)>', '<ExcThread(monitor, started 140407975438080)>']
[2025-12-13 20:45:34] 2025-12-13 19:45:25,399 | INFO     | PID=17508 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | INFO     | .. there are 9 such processes running
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 20:45:34] 2025-12-13 19:45:25,400 | INFO     | [monitor] control thread has ended
[2025-12-13 20:45:34] 2025-12-13 19:45:30,354 | INFO     | all workflow threads have been joined
[2025-12-13 20:45:34] 2025-12-13 19:45:30,354 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 20:45:34] 2025-12-13 19:45:30,354 | INFO     | traces error code: 0
[2025-12-13 20:45:34] 2025-12-13 19:45:30,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 20:45:34] 2025-12-13 19:45:30,582 [wrapper] ==== pilot stdout END ====
[2025-12-13 20:45:34] 2025-12-13 19:45:30,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 20:45:34] 2025-12-13 19:45:30,681 [wrapper] pilotpid: 17508
[2025-12-13 20:45:34] 2025-12-13 19:45:30,764 [wrapper] Pilot exit status: 0
[2025-12-13 20:45:34] 2025-12-13 19:45:31,206 [wrapper] pandaids: 6929222269
[2025-12-13 20:45:34] 2025-12-13 19:45:31,938 [wrapper] cleanup supervisor_pilot 24550 17509
[2025-12-13 20:45:34] 2025-12-13 19:45:31,988 [wrapper] Test setup, not cleaning
[2025-12-13 20:45:34] 2025-12-13 19:45:32,049 [wrapper] apfmon messages muted
[2025-12-13 20:45:34] 2025-12-13 19:45:32,135 [wrapper] ==== wrapper stdout END ====
[2025-12-13 20:45:34] 2025-12-13 19:45:32,245 [wrapper] ==== wrapper stderr END ====
[2025-12-13 20:45:34]  *** Error codes and diagnostics ***
[2025-12-13 20:45:34]     "exeErrorCode": 0,
[2025-12-13 20:45:34]     "exeErrorDiag": "",
[2025-12-13 20:45:34]     "pilotErrorCode": 0,
[2025-12-13 20:45:34]     "pilotErrorDiag": "",
[2025-12-13 20:45:34]  *** Listing of results directory ***
[2025-12-13 20:45:34] total 344576
[2025-12-13 20:45:34] -rwx------. 1 boinc boinc     36322 Dec 13 09:50 runpilot2-wrapper.sh
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc    579449 Dec 13 09:51 pilot3.tar.gz
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc      5112 Dec 13 09:53 queuedata.json
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc       100 Dec 13 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 20:45:34] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 16:04 run_atlas
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc       105 Dec 13 16:04 job.xml
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc      6392 Dec 13 16:04 init_data.xml
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc 191393420 Dec 13 16:04 EVNT.47886829._000172.pool.root.1
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc     15847 Dec 13 16:04 start_atlas.sh
[2025-12-13 20:45:34] drwxrwx--x. 2 boinc boinc        68 Dec 13 16:04 shared
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc    592417 Dec 13 16:04 input.tar.gz
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc         0 Dec 13 16:04 boinc_lockfile
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc      2537 Dec 13 16:04 pandaJob.out
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc    991736 Dec 13 16:07 agis_schedconf.cvmfs.json
[2025-12-13 20:45:34] drwx------. 5 boinc boinc      4096 Dec 13 16:07 pilot3
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc 152125283 Dec 13 20:42 HITS.47886831._004301.pool.root.1
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc       531 Dec 13 20:42 boinc_task_state.xml
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc      1013 Dec 13 20:43 memory_monitor_summary.json
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc   1516240 Dec 13 20:43 agis_ddmendpoints.agis.ALL.json
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc    494741 Dec 13 20:43 log.47886831._004301.job.log.tgz.1
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc        95 Dec 13 20:44 pilot_heartbeat.json
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc      7791 Dec 13 20:44 heartbeat.json
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc        28 Dec 13 20:45 wrapper_checkpoint.txt
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc      8192 Dec 13 20:45 boinc_mmap_file
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc      4956 Dec 13 20:45 pilotlog.txt
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc   2218300 Dec 13 20:45 log.47886831._004301.job.log.1
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc       357 Dec 13 20:45 output.list
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc       620 Dec 13 20:45 runtime_log
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc   2734080 Dec 13 20:45 result.tar.gz
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc       657 Dec 13 20:45 spJKDm8Vao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxKOKDm0z42Vo.diag
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc      8817 Dec 13 20:45 runtime_log.err
[2025-12-13 20:45:34] -rw-r--r--. 1 boinc boinc     20984 Dec 13 20:45 stderr.txt
[2025-12-13 20:45:34] HITS file was successfully produced:
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc 152125283 Dec 13 20:42 shared/HITS.pool.root.1
[2025-12-13 20:45:34]  *** Contents of shared directory: ***
[2025-12-13 20:45:34] total 338736
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc 191393420 Dec 13 16:04 ATLAS.root_0
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc     15847 Dec 13 16:04 start_atlas.sh
[2025-12-13 20:45:34] -rw-r--r--. 2 boinc boinc    592417 Dec 13 16:04 input.tar.gz
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc 152125283 Dec 13 20:42 HITS.pool.root.1
[2025-12-13 20:45:34] -rw-------. 1 boinc boinc   2734080 Dec 13 20:45 result.tar.gz
20:45:36 (13666): run_atlas exited; CPU time 60109.124097
20:45:36 (13666): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN