Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:00 (15504): wrapper (7.7.26015): starting
15:31:00 (15504): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 15:31:00] Arguments: --nthreads 8
[2025-12-13 15:31:00] Threads: 8
[2025-12-13 15:31:00] Checking for CVMFS
[2025-12-13 15:31:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 15:31:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 15:31:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 15:31:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 15:31:03] 2.11.2.0 31726 309810 140888 153963 0 94 13030950 25165824 3976 130560 9 151598994 99.871 85057782 2589 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 15:31:03] CVMFS is ok
[2025-12-13 15:31:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 15:31:03] Checking for apptainer binary...
[2025-12-13 15:31:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 15:31:03] Running /usr/bin/apptainer --version
[2025-12-13 15:31:03] apptainer version 1.3.2-1.el7
[2025-12-13 15:31:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 15:31:24] cg-vwn427.simple-grid.lan
[2025-12-13 15:31:24] apptainer works
[2025-12-13 15:31:24] Set ATHENA_PROC_NUMBER=8
[2025-12-13 15:31:24] Set ATHENA_CORE_NUMBER=8
[2025-12-13 15:31:24] Starting ATLAS job with PandaID=6929219444
[2025-12-13 15:31:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 21:37:40]  *** The last 200 lines of the pilot log: ***
[2025-12-13 21:37:40] 2025-12-13 20:36:37,775 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 21:37:40] 2025-12-13 20:36:37,777 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6929219444/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,778 | INFO     | extracted standard info from prmon json
[2025-12-13 21:37:40] 2025-12-13 20:36:37,778 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 21:37:40] 2025-12-13 20:36:37,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 21:37:40] 2025-12-13 20:36:37,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 21:37:40] 2025-12-13 20:36:37,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 21:37:40] 2025-12-13 20:36:37,787 | INFO     | fitting pss+swap vs Time
[2025-12-13 21:37:40] 2025-12-13 20:36:37,788 | INFO     | sum of square deviations: 13068103627.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,793 | INFO     | sum of deviations: 183023783930.49997
[2025-12-13 21:37:40] 2025-12-13 20:36:37,793 | INFO     | mean x: 1765647542.5
[2025-12-13 21:37:40] 2025-12-13 20:36:37,793 | INFO     | mean y: 2452752.2040229887
[2025-12-13 21:37:40] 2025-12-13 20:36:37,793 | INFO     | intersect: -24726115641.473766
[2025-12-13 21:37:40] 2025-12-13 20:36:37,794 | INFO     | chi2: 6.115663354597279
[2025-12-13 21:37:40] 2025-12-13 20:36:37,795 | INFO     | sum of square deviations: 12512874612.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,799 | INFO     | sum of deviations: 179962910040.00003
[2025-12-13 21:37:40] 2025-12-13 20:36:37,799 | INFO     | mean x: 1765647390.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,799 | INFO     | mean y: 2451911.4518950437
[2025-12-13 21:37:40] 2025-12-13 20:36:37,800 | INFO     | intersect: -25391476523.202415
[2025-12-13 21:37:40] 2025-12-13 20:36:37,800 | INFO     | chi2: 6.1206147942001605
[2025-12-13 21:37:40] 2025-12-13 20:36:37,800 | INFO     | current chi2=6.1206147942001605 (change=-0.08096324659792223 %)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,801 | INFO     | right removable region: 342
[2025-12-13 21:37:40] 2025-12-13 20:36:37,801 | INFO     | sum of square deviations: 12512874612.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,806 | INFO     | sum of deviations: 63100767104.99999
[2025-12-13 21:37:40] 2025-12-13 20:36:37,807 | INFO     | mean x: 1765647695.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,807 | INFO     | mean y: 2485671.177842566
[2025-12-13 21:37:40] 2025-12-13 20:36:37,807 | INFO     | intersect: -8901441479.568792
[2025-12-13 21:37:40] 2025-12-13 20:36:37,807 | INFO     | chi2: 1.5046333763032782
[2025-12-13 21:37:40] 2025-12-13 20:36:37,808 | INFO     | current chi2=1.5046333763032782 (change=75.39705361361638 %)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,809 | INFO     | sum of square deviations: 11973599384.5
[2025-12-13 21:37:40] 2025-12-13 20:36:37,802 | INFO     | time since job start (21703s) is within the limit (174528.0s)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,813 | INFO     | sum of deviations: 3083291085.5
[2025-12-13 21:37:40] 2025-12-13 20:36:37,813 | INFO     | mean x: 1765647847.5
[2025-12-13 21:37:40] 2025-12-13 20:36:37,813 | INFO     | mean y: 2502568.174556213
[2025-12-13 21:37:40] 2025-12-13 20:36:37,814 | INFO     | intersect: -452164912.63128734
[2025-12-13 21:37:40] 2025-12-13 20:36:37,814 | INFO     | chi2: 0.09371269151293254
[2025-12-13 21:37:40] 2025-12-13 20:36:37,814 | INFO     | current chi2=0.09371269151293254 (change=93.77172585768538 %)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,815 | INFO     | sum of square deviations: 11450045382.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,819 | INFO     | sum of deviations: -1927751341.0000181
[2025-12-13 21:37:40] 2025-12-13 20:36:37,820 | INFO     | mean x: 1765648000.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,820 | INFO     | mean y: 2504025.7057057056
[2025-12-13 21:37:40] 2025-12-13 20:36:37,820 | INFO     | intersect: 299771869.2973845
[2025-12-13 21:37:40] 2025-12-13 20:36:37,820 | INFO     | chi2: 0.08532382337188348
[2025-12-13 21:37:40] 2025-12-13 20:36:37,821 | INFO     | current chi2=0.08532382337188348 (change=8.951688405931002 %)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,821 | INFO     | left removable region: 30
[2025-12-13 21:37:40] 2025-12-13 20:36:37,821 | INFO     | sum of square deviations: 9417545878.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,825 | INFO     | sum of deviations: 16490104929.0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,825 | INFO     | mean x: 1765648274.5
[2025-12-13 21:37:40] 2025-12-13 20:36:37,825 | INFO     | mean y: 2497990.294871795
[2025-12-13 21:37:40] 2025-12-13 20:36:37,825 | INFO     | intersect: -3089148781.7404017
[2025-12-13 21:37:40] 2025-12-13 20:36:37,826 | INFO     | chi2: 0.001962882906475353
[2025-12-13 21:37:40] 2025-12-13 20:36:37,826 | INFO     | current memory leak: 1.75 B/s (using 312 data points, chi2=0.00)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,827 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,827 | INFO     | ..............................
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . Timing measurements:
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . get job = 0 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . initial setup = 7 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . payload setup = 130 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . stage-in = 0 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . payload execution = 21377 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . stage-out = 3 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | . log creation = 0 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,828 | INFO     | ..............................
[2025-12-13 21:37:40] 2025-12-13 20:36:37,965 | INFO     | 
[2025-12-13 21:37:40] 2025-12-13 20:36:37,965 | INFO     | job summary report
[2025-12-13 21:37:40] 2025-12-13 20:36:37,965 | INFO     | --------------------------------------------------
[2025-12-13 21:37:40] 2025-12-13 20:36:37,965 | INFO     | PanDA job id: 6929219444
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | task id: 47898836
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | errors: (none)
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | pilot state: finished 
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | transexitcode: 0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | exeerrorcode: 0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | exeerrordiag: 
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | exitcode: 0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,966 | INFO     | exitmsg: OK
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | cpuconsumptiontime: 77852 s
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | nevents: 400
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | neventsw: 0
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | pid: 26032
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | pgrp: 26032
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | corecount: 8
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | event service: False
[2025-12-13 21:37:40] 2025-12-13 20:36:37,967 | INFO     | sizes: {0: 2283174, 1: 2284031, 2: 2284031, 12: 2284059, 23: 2284087, 34: 2284115, 45: 2284271, 55: 2284299, 66: 2284327, 77: 2284355, 86: 2284673, 88: 2284981, 21
[2025-12-13 21:37:40] 2025-12-13 20:36:37,968 | INFO     | --------------------------------------------------
[2025-12-13 21:37:40] 2025-12-13 20:36:37,968 | INFO     | 
[2025-12-13 21:37:40] 2025-12-13 20:36:37,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-13 21:37:40] 2025-12-13 20:36:38,004 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,004 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 21:37:40] 2025-12-13 20:36:38,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 21:37:40] 2025-12-13 20:36:38,007 | INFO     | job 6929219444 has completed (purged errors)
[2025-12-13 21:37:40] 2025-12-13 20:36:38,007 | INFO     | overall cleanup function is called
[2025-12-13 21:37:40] 2025-12-13 20:36:39,016 | INFO     | --- collectZombieJob: --- 10, [26032]
[2025-12-13 21:37:40] 2025-12-13 20:36:39,016 | INFO     | zombie collector waiting for pid 26032
[2025-12-13 21:37:40] 2025-12-13 20:36:39,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 21:37:40] 2025-12-13 20:36:39,017 | INFO     | collected zombie processes
[2025-12-13 21:37:40] 2025-12-13 20:36:39,017 | INFO     | will attempt to kill all subprocesses of pid=26032
[2025-12-13 21:37:40] 2025-12-13 20:36:39,137 | INFO     | process IDs to be killed: [26032] (in reverse order)
[2025-12-13 21:37:40] 2025-12-13 20:36:39,346 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 21:37:40] 2025-12-13 20:36:39,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 21:37:40] 2025-12-13 20:36:39,351 | INFO     | did not find any defunct processes belonging to 26032
[2025-12-13 21:37:40] 2025-12-13 20:36:39,354 | INFO     | did not find any defunct processes belonging to 26032
[2025-12-13 21:37:40] 2025-12-13 20:36:39,354 | INFO     | ready for new job
[2025-12-13 21:37:40] 2025-12-13 20:36:39,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 21:37:40] 2025-12-13 20:36:39,357 | INFO     | ***************************************
[2025-12-13 21:37:40] 2025-12-13 20:36:39,357 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 21:37:40] 2025-12-13 20:36:39,357 | INFO     | ***************************************
[2025-12-13 21:37:40] 2025-12-13 20:36:39,357 | INFO     | 
[2025-12-13 21:37:40] 2025-12-13 20:36:39,358 | INFO     | pilot is running in a VM
[2025-12-13 21:37:40] 2025-12-13 20:36:39,358 | INFO     | architecture information:
[2025-12-13 21:37:40] 2025-12-13 20:36:39,359 | INFO     | executing command: cat /etc/os-release
[2025-12-13 21:37:40] 2025-12-13 20:36:39,389 | INFO     | cat /etc/os-release:
[2025-12-13 21:37:40] NAME="CentOS Linux"
[2025-12-13 21:37:40] VERSION="7 (Core)"
[2025-12-13 21:37:40] ID="centos"
[2025-12-13 21:37:40] ID_LIKE="rhel fedora"
[2025-12-13 21:37:40] VERSION_ID="7"
[2025-12-13 21:37:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 21:37:40] ANSI_COLOR="0;31"
[2025-12-13 21:37:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 21:37:40] HOME_URL="https://www.centos.org/"
[2025-12-13 21:37:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 21:37:40] 
[2025-12-13 21:37:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 21:37:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 21:37:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 21:37:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 21:37:40] 
[2025-12-13 21:37:40] 2025-12-13 20:36:39,390 | INFO     | ***************************************
[2025-12-13 21:37:40] 2025-12-13 20:36:39,893 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-13 21:37:40] 2025-12-13 20:36:39,922 | INFO     | sufficient remaining disk space (497107861504 B)
[2025-12-13 21:37:40] 2025-12-13 20:36:39,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 21:37:40] 2025-12-13 20:36:39,922 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 21:37:40] 2025-12-13 20:36:39,922 | INFO     | update_server=False
[2025-12-13 21:37:40] 2025-12-13 20:36:39,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 21:37:40] 2025-12-13 20:36:39,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:37:40] 2025-12-13 20:36:39,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 21:37:40] 2025-12-13 20:36:39,924 | INFO     | aborting loop
[2025-12-13 21:37:40] 2025-12-13 20:36:40,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 21:37:40] 2025-12-13 20:36:40,809 | INFO     | all data control threads have been joined
[2025-12-13 21:37:40] 2025-12-13 20:36:40,928 | INFO     | [job] queue monitor thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:40,928 | INFO     | [job] retrieve thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:40,930 | INFO     | [job] job monitor thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:40,939 | INFO     | all job control threads have been joined
[2025-12-13 21:37:40] 2025-12-13 20:36:41,145 | INFO     | all payload control threads have been joined
[2025-12-13 21:37:40] 2025-12-13 20:36:41,524 | INFO     | [payload] validate_post thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:41,666 | INFO     | [job] validate thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:41,696 | INFO     | [payload] failed_post thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:41,701 | INFO     | [data] copytool_in thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:41,816 | INFO     | [data] control thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:41,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 21:37:40] 2025-12-13 20:36:41,945 | INFO     | [job] control thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:42,066 | INFO     | [data] copytool_out thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:42,086 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:42,152 | INFO     | [payload] control thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:42,258 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:42,402 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:45,892 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:36:50,505 | INFO     | job.realtimelogging is not enabled
[2025-12-13 21:37:40] 2025-12-13 20:36:51,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 21:37:40] 2025-12-13 20:37:11,003 | INFO     | PID=19384 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 21:37:40] 2025-12-13 20:37:11,003 | INFO     | .. there are 9 such processes running
[2025-12-13 21:37:40] 2025-12-13 20:37:11,003 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 21:37:40] 2025-12-13 20:37:11,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 21:37:40] 2025-12-13 20:37:11,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 21:37:40] 2025-12-13 20:37:30,903 | INFO     | [monitor] cgroup control has ended
[2025-12-13 21:37:40] 2025-12-13 20:37:31,911 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714362951488)>', '<ExcThread(monitor, started 140713782138624)>']
[2025-12-13 21:37:40] 2025-12-13 20:37:32,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 21:37:40] 2025-12-13 20:37:32,131 | INFO     | [monitor] control thread has ended
[2025-12-13 21:37:40] 2025-12-13 20:37:36,936 | INFO     | all workflow threads have been joined
[2025-12-13 21:37:40] 2025-12-13 20:37:36,937 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 21:37:40] 2025-12-13 20:37:36,937 | INFO     | traces error code: 0
[2025-12-13 21:37:40] 2025-12-13 20:37:36,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 21:37:40] 2025-12-13 20:37:37,267 [wrapper] ==== pilot stdout END ====
[2025-12-13 21:37:40] 2025-12-13 20:37:37,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 21:37:40] 2025-12-13 20:37:37,478 [wrapper] pilotpid: 19384
[2025-12-13 21:37:40] 2025-12-13 20:37:37,594 [wrapper] Pilot exit status: 0
[2025-12-13 21:37:40] 2025-12-13 20:37:37,936 [wrapper] pandaids: 6929219444
[2025-12-13 21:37:40] 2025-12-13 20:37:38,748 [wrapper] cleanup supervisor_pilot 15043 19385
[2025-12-13 21:37:40] 2025-12-13 20:37:38,798 [wrapper] Test setup, not cleaning
[2025-12-13 21:37:40] 2025-12-13 20:37:38,848 [wrapper] apfmon messages muted
[2025-12-13 21:37:40] 2025-12-13 20:37:38,921 [wrapper] ==== wrapper stdout END ====
[2025-12-13 21:37:40] 2025-12-13 20:37:39,022 [wrapper] ==== wrapper stderr END ====
[2025-12-13 21:37:40]  *** Error codes and diagnostics ***
[2025-12-13 21:37:40]     "exeErrorCode": 0,
[2025-12-13 21:37:40]     "exeErrorDiag": "",
[2025-12-13 21:37:40]     "pilotErrorCode": 0,
[2025-12-13 21:37:40]     "pilotErrorDiag": "",
[2025-12-13 21:37:40]  *** Listing of results directory ***
[2025-12-13 21:37:40] total 414024
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc    579449 Dec 13 09:48 pilot3.tar.gz
[2025-12-13 21:37:40] -rwx------. 1 boinc boinc     36322 Dec 13 09:48 runpilot2-wrapper.sh
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc      5112 Dec 13 09:50 queuedata.json
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc       100 Dec 13 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 21:37:40] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 15:31 run_atlas
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc       105 Dec 13 15:31 job.xml
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc 213257544 Dec 13 15:31 EVNT.47898833._000027.pool.root.1
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc      6392 Dec 13 15:31 init_data.xml
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc     15847 Dec 13 15:31 start_atlas.sh
[2025-12-13 21:37:40] drwxrwx--x. 2 boinc boinc        68 Dec 13 15:31 shared
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc    592390 Dec 13 15:31 input.tar.gz
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc         0 Dec 13 15:31 boinc_lockfile
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc      2547 Dec 13 15:31 pandaJob.out
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc    991736 Dec 13 15:34 agis_schedconf.cvmfs.json
[2025-12-13 21:37:40] drwx------. 5 boinc boinc      4096 Dec 13 15:34 pilot3
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc 199893864 Dec 13 21:35 HITS.47898836._000671.pool.root.1
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc       531 Dec 13 21:35 boinc_task_state.xml
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc      1016 Dec 13 21:36 memory_monitor_summary.json
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc        95 Dec 13 21:36 pilot_heartbeat.json
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc   1516240 Dec 13 21:36 agis_ddmendpoints.agis.ALL.json
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc    564543 Dec 13 21:36 log.47898836._000671.job.log.tgz.1
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc      7773 Dec 13 21:36 heartbeat.json
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc      4957 Dec 13 21:37 pilotlog.txt
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc      8192 Dec 13 21:37 boinc_mmap_file
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc        28 Dec 13 21:37 wrapper_checkpoint.txt
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc   2889121 Dec 13 21:37 log.47898836._000671.job.log.1
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc       357 Dec 13 21:37 output.list
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc       620 Dec 13 21:37 runtime_log
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc   3471360 Dec 13 21:37 result.tar.gz
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc      8833 Dec 13 21:37 runtime_log.err
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc       658 Dec 13 21:37 2YzKDm1Tao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAGOKDmZanNQm.diag
[2025-12-13 21:37:40] -rw-r--r--. 1 boinc boinc     20795 Dec 13 21:37 stderr.txt
[2025-12-13 21:37:40] HITS file was successfully produced:
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc 199893864 Dec 13 21:35 shared/HITS.pool.root.1
[2025-12-13 21:37:40]  *** Contents of shared directory: ***
[2025-12-13 21:37:40] total 407460
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc 213257544 Dec 13 15:31 ATLAS.root_0
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc     15847 Dec 13 15:31 start_atlas.sh
[2025-12-13 21:37:40] -rw-r--r--. 2 boinc boinc    592390 Dec 13 15:31 input.tar.gz
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc 199893864 Dec 13 21:35 HITS.pool.root.1
[2025-12-13 21:37:40] -rw-------. 1 boinc boinc   3471360 Dec 13 21:37 result.tar.gz
21:37:42 (15504): run_atlas exited; CPU time 78152.015895
21:37:42 (15504): called boinc_finish(0)

</stderr_txt>
]]>

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