Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:38:25 (3629): wrapper (7.7.26015): starting
04:38:25 (3629): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 04:38:25] Arguments: --nthreads 12
[2025-12-13 04:38:25] Threads: 12
[2025-12-13 04:38:25] Checking for CVMFS
[2025-12-13 04:38:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 04:38:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 04:38:25] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 04:38:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 04:38:25] 2.11.2.0 2914 311992 93524 153955 3 59 13977307 20275200 1 130560 1 137451437 99.962 18261840 14977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 04:38:25] CVMFS is ok
[2025-12-13 04:38:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 04:38:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 04:38:25] Further information can be found at the LHC@home message board.
[2025-12-13 04:38:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 04:38:25] Checking for apptainer binary...
[2025-12-13 04:38:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 04:38:25] Running /usr/bin/apptainer --version
[2025-12-13 04:38:25] apptainer version 1.3.2-1.el7
[2025-12-13 04:38:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 04:38:27] c-205-5.aglt2.org
[2025-12-13 04:38:27] apptainer works
[2025-12-13 04:38:27] Set ATHENA_PROC_NUMBER=12
[2025-12-13 04:38:27] Set ATHENA_CORE_NUMBER=12
[2025-12-13 04:38:27] Starting ATLAS job with PandaID=6929219416
[2025-12-13 04:38:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:18:57]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:18:57]  status=None
[2025-12-13 06:18:57]  status_code=0
[2025-12-13 06:18:57]  storage_token=
[2025-12-13 06:18:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929219416/log.47898836._000643.job.log.tgz.1
[2025-12-13 06:18:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/a9/log.47898836._000643.job.log.tgz.1
[2025-12-13 06:18:57]  workdir=None
[2025-12-13 06:18:57] ]
[2025-12-13 06:18:57] 2025-12-13 11:18:13,183 | INFO     | transferring file log.47898836._000643.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929219416/log.47898836._000643.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 06:18:57] 2025-12-13 11:18:13,183 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929219416/log.47898836._000643.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898836._000643.job
[2025-12-13 06:18:57] 2025-12-13 11:18:13,207 | INFO     | adding to output.list: log.47898836._000643.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/a9/log.47898836._000643.job.log.tg
[2025-12-13 06:18:57] 2025-12-13 11:18:13,208 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 06:18:57] 2025-12-13 11:18:13,208 | INFO     | summary of transferred files:
[2025-12-13 06:18:57] 2025-12-13 11:18:13,208 | INFO     |  -- lfn=log.47898836._000643.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 06:18:57] 2025-12-13 11:18:13,208 | INFO     | stage-out finished correctly
[2025-12-13 06:18:57] 2025-12-13 11:18:13,591 | INFO     | time since job start (5971s) is within the limit (174528.0s)
[2025-12-13 06:18:57] 2025-12-13 11:18:14,619 | INFO     | monitor loop #443: job 0:6929219416 is in state 'finished'
[2025-12-13 06:18:57] 2025-12-13 11:18:14,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:18:57] 2025-12-13 11:18:15,597 | INFO     | time since job start (5973s) is within the limit (174528.0s)
[2025-12-13 06:18:57] 2025-12-13 11:18:16,330 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 06:18:57] 2025-12-13 11:18:17,122 | INFO     | monitor loop #444: job 0:6929219416 is in state 'finished'
[2025-12-13 06:18:57] 2025-12-13 11:18:17,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:18:57] 2025-12-13 11:18:17,341 | INFO     | job 6929219416 has state=finished
[2025-12-13 06:18:57] 2025-12-13 11:18:17,341 | INFO     | preparing for final server update for job 6929219416 in state='finished'
[2025-12-13 06:18:57] 2025-12-13 11:18:17,342 | INFO     | this job has now completed (state=finished)
[2025-12-13 06:18:57] 2025-12-13 11:18:17,342 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 06:18:57] 2025-12-13 11:18:17,343 | INFO     | log transfer has been attempted: DONE
[2025-12-13 06:18:57] 2025-12-13 11:18:17,343 | INFO     | job 6929219416 has finished - writing final server update
[2025-12-13 06:18:57] 2025-12-13 11:18:17,343 | INFO     | total number of processed events: 400 (read)
[2025-12-13 06:18:57] 2025-12-13 11:18:17,344 | INFO     | executing command: lscpu
[2025-12-13 06:18:57] 2025-12-13 11:18:17,371 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 06:18:57] 2025-12-13 11:18:17,602 | INFO     | time since job start (5975s) is within the limit (174528.0s)
[2025-12-13 06:18:57] 2025-12-13 11:18:19,608 | INFO     | time since job start (5977s) is within the limit (174528.0s)
[2025-12-13 06:18:57] 2025-12-13 11:18:19,625 | INFO     | monitor loop #445: job 0:6929219416 is in state 'finished'
[2025-12-13 06:18:57] 2025-12-13 11:18:19,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:18:57] 2025-12-13 11:18:20,728 | INFO     | PID=7331 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 06:18:57] 2025-12-13 11:18:21,728 | INFO     | time since job start (5979s) is within the limit (174528.0s)
[2025-12-13 06:18:57] 2025-12-13 11:18:22,128 | INFO     | monitor loop #446: job 0:6929219416 is in state 'finished'
[2025-12-13 06:18:57] 2025-12-13 11:18:22,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,358 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 06:18:57] 2025-12-13 11:18:23,362 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-13 06:18:57] 2025-12-13 11:18:23,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929219416/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,365 | INFO     | extracted standard info from prmon json
[2025-12-13 06:18:57] 2025-12-13 11:18:23,366 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:18:57] 2025-12-13 11:18:23,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:18:57] 2025-12-13 11:18:23,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:18:57] 2025-12-13 11:18:23,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:18:57] 2025-12-13 11:18:23,369 | INFO     | fitting pss+swap vs Time
[2025-12-13 06:18:57] 2025-12-13 11:18:23,369 | INFO     | sum of square deviations: 233641590.0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,370 | INFO     | sum of deviations: -13083691384.0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,370 | INFO     | mean x: 1765621802.0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,370 | INFO     | mean y: 2769983.912087912
[2025-12-13 06:18:57] 2025-12-13 11:18:23,370 | INFO     | intersect: 98875794937.34592
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | chi2: 0.10845224596873113
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | current memory leak: -56.00 B/s (using 91 data points, chi2=0.11)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | could have reported an average CPU frequency of 2130 MHz (7 samples)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | ..............................
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | . Timing measurements:
[2025-12-13 06:18:57] 2025-12-13 11:18:23,371 | INFO     | . get job = 0 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . initial setup = 2 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . payload setup = 7 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . stage-in = 0 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . payload execution = 5942 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . stage-out = 0 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | . log creation = 0 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,372 | INFO     | ..............................
[2025-12-13 06:18:57] 2025-12-13 11:18:23,453 | INFO     | 
[2025-12-13 06:18:57] 2025-12-13 11:18:23,453 | INFO     | job summary report
[2025-12-13 06:18:57] 2025-12-13 11:18:23,459 | INFO     | --------------------------------------------------
[2025-12-13 06:18:57] 2025-12-13 11:18:23,459 | INFO     | PanDA job id: 6929219416
[2025-12-13 06:18:57] 2025-12-13 11:18:23,459 | INFO     | task id: 47898836
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | errors: (none)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | pilot state: finished 
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | transexitcode: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | exeerrorcode: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,460 | INFO     | exeerrordiag: 
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | exitcode: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | exitmsg: OK
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | cpuconsumptiontime: 65227 s
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | nevents: 400
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | neventsw: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | pid: 13745
[2025-12-13 06:18:57] 2025-12-13 11:18:23,461 | INFO     | pgrp: 13745
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | corecount: 12
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | event service: False
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | sizes: {0: 2284002, 1: 2284002, 5: 2284292, 11: 2284348, 5953: 2311042, 5954: 2320040, 5958: 2320224, 5965: 2320418}
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | --------------------------------------------------
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | 
[2025-12-13 06:18:57] 2025-12-13 11:18:23,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 06:18:57] 2025-12-13 11:18:23,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,492 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:18:57] 2025-12-13 11:18:23,493 | INFO     | job 6929219416 has completed (purged errors)
[2025-12-13 06:18:57] 2025-12-13 11:18:23,493 | INFO     | overall cleanup function is called
[2025-12-13 06:18:57] 2025-12-13 11:18:24,502 | INFO     | --- collectZombieJob: --- 10, [13745]
[2025-12-13 06:18:57] 2025-12-13 11:18:24,502 | INFO     | zombie collector waiting for pid 13745
[2025-12-13 06:18:57] 2025-12-13 11:18:24,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:18:57] 2025-12-13 11:18:24,502 | INFO     | collected zombie processes
[2025-12-13 06:18:57] 2025-12-13 11:18:24,503 | INFO     | will attempt to kill all subprocesses of pid=13745
[2025-12-13 06:18:57] 2025-12-13 11:18:24,593 | INFO     | process IDs to be killed: [13745] (in reverse order)
[2025-12-13 06:18:57] 2025-12-13 11:18:24,648 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:18:57] 2025-12-13 11:18:24,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:18:57] 2025-12-13 11:18:24,652 | INFO     | did not find any defunct processes belonging to 13745
[2025-12-13 06:18:57] 2025-12-13 11:18:24,656 | INFO     | did not find any defunct processes belonging to 13745
[2025-12-13 06:18:57] 2025-12-13 11:18:24,656 | INFO     | ready for new job
[2025-12-13 06:18:57] 2025-12-13 11:18:24,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:18:57] 2025-12-13 11:18:24,658 | INFO     | ***************************************
[2025-12-13 06:18:57] 2025-12-13 11:18:24,658 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:18:57] 2025-12-13 11:18:24,659 | INFO     | ***************************************
[2025-12-13 06:18:57] 2025-12-13 11:18:24,659 | INFO     | 
[2025-12-13 06:18:57] 2025-12-13 11:18:24,659 | INFO     | architecture information:
[2025-12-13 06:18:57] 2025-12-13 11:18:24,660 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:18:57] 2025-12-13 11:18:24,675 | INFO     | cat /etc/os-release:
[2025-12-13 06:18:57] NAME="CentOS Linux"
[2025-12-13 06:18:57] VERSION="7 (Core)"
[2025-12-13 06:18:57] ID="centos"
[2025-12-13 06:18:57] ID_LIKE="rhel fedora"
[2025-12-13 06:18:57] VERSION_ID="7"
[2025-12-13 06:18:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:18:57] ANSI_COLOR="0;31"
[2025-12-13 06:18:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:18:57] HOME_URL="https://www.centos.org/"
[2025-12-13 06:18:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:18:57] 
[2025-12-13 06:18:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:18:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:18:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:18:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:18:57] 
[2025-12-13 06:18:57] 2025-12-13 11:18:24,675 | INFO     | ***************************************
[2025-12-13 06:18:57] 2025-12-13 11:18:25,178 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 06:18:57] 2025-12-13 11:18:25,195 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-12-13 06:18:57] 2025-12-13 11:18:25,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:18:57] 2025-12-13 11:18:25,196 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:18:57] 2025-12-13 11:18:25,196 | INFO     | update_server=False
[2025-12-13 06:18:57] 2025-12-13 11:18:25,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:18:57] 2025-12-13 11:18:25,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:18:57] 2025-12-13 11:18:25,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:18:57] 2025-12-13 11:18:25,637 | INFO     | aborting loop
[2025-12-13 06:18:57] 2025-12-13 11:18:25,880 | INFO     | all job control threads have been joined
[2025-12-13 06:18:57] 2025-12-13 11:18:25,903 | INFO     | all payload control threads have been joined
[2025-12-13 06:18:57] 2025-12-13 11:18:25,938 | INFO     | all data control threads have been joined
[2025-12-13 06:18:57] 2025-12-13 11:18:26,198 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,202 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:18:57] 2025-12-13 11:18:26,579 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,642 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,833 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,835 | INFO     | [job] validate thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,885 | INFO     | [job] control thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,909 | INFO     | [payload] control thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:26,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:18:57] 2025-12-13 11:18:26,939 | INFO     | [data] control thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:27,019 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:27,250 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:27,488 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:27,501 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:28,321 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:30,934 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:35,411 | INFO     | job.realtimelogging is not enabled
[2025-12-13 06:18:57] 2025-12-13 11:18:36,416 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:18:57] 2025-12-13 11:18:51,716 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:18:57] 2025-12-13 11:18:51,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726543345472)>', '<ExcThread(monitor, started 139725721548544)>']
[2025-12-13 06:18:57] 2025-12-13 11:18:54,971 | INFO     | PID=7331 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 06:18:57] 2025-12-13 11:18:54,971 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:18:57] 2025-12-13 11:18:54,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:18:57] 2025-12-13 11:18:54,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:18:57] 2025-12-13 11:18:54,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:18:57] 2025-12-13 11:18:54,972 | INFO     | [monitor] control thread has ended
[2025-12-13 06:18:57] 2025-12-13 11:18:56,822 | INFO     | all workflow threads have been joined
[2025-12-13 06:18:57] 2025-12-13 11:18:56,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:18:57] 2025-12-13 11:18:56,832 | INFO     | traces error code: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:56,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:18:57] 2025-12-13 11:18:56,949 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:18:57] 2025-12-13 11:18:56,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:18:57] 2025-12-13 11:18:56,957 [wrapper] pilotpid: 7331
[2025-12-13 06:18:57] 2025-12-13 11:18:56,961 [wrapper] Pilot exit status: 0
[2025-12-13 06:18:57] 2025-12-13 11:18:56,978 [wrapper] pandaids: 6929219416
[2025-12-13 06:18:57] 2025-12-13 11:18:57,028 [wrapper] cleanup supervisor_pilot 13090 7332
[2025-12-13 06:18:57] 2025-12-13 11:18:57,032 [wrapper] Test setup, not cleaning
[2025-12-13 06:18:57] 2025-12-13 11:18:57,035 [wrapper] apfmon messages muted
[2025-12-13 06:18:57] 2025-12-13 11:18:57,040 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:18:57] 2025-12-13 11:18:57,043 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:18:57]  *** Error codes and diagnostics ***
[2025-12-13 06:18:57]     "exeErrorCode": 0,
[2025-12-13 06:18:57]     "exeErrorDiag": "",
[2025-12-13 06:18:57]     "pilotErrorCode": 0,
[2025-12-13 06:18:57]     "pilotErrorDiag": "",
[2025-12-13 06:18:57]  *** Listing of results directory ***
[2025-12-13 06:18:57] total 407096
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 06:18:57] -rwx------ 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas       100 Dec 13 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:18:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 04:38 run_atlas
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas       105 Dec 13 04:38 job.xml
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas 212684793 Dec 13 04:38 EVNT.47898833._000026.pool.root.1
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:38 start_atlas.sh
[2025-12-13 06:18:57] drwxrwx--x 2 boincer umatlas      4096 Dec 13 04:38 shared
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas    592391 Dec 13 04:38 input.tar.gz
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas         0 Dec 13 04:38 boinc_lockfile
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas      2547 Dec 13 04:38 pandaJob.out
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas        57 Dec 13 04:38 setup.sh.local
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas    991736 Dec 13 04:38 agis_schedconf.cvmfs.json
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas   1516240 Dec 13 04:38 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:18:57] drwx------ 5 boincer umatlas      4096 Dec 13 04:38 pilot3
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 06:09 init_data.xml
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas 197743452 Dec 13 06:17 HITS.47898836._000643.pool.root.1
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas       529 Dec 13 06:17 boinc_task_state.xml
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas        95 Dec 13 06:18 pilot_heartbeat.json
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas      1047 Dec 13 06:18 memory_monitor_summary.json
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas    409884 Dec 13 06:18 log.47898836._000643.job.log.tgz.1
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas      7840 Dec 13 06:18 heartbeat.json
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas        27 Dec 13 06:18 wrapper_checkpoint.txt
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 06:18 boinc_mmap_file
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas      4817 Dec 13 06:18 pilotlog.txt
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas    850506 Dec 13 06:18 log.47898836._000643.job.log.1
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas       357 Dec 13 06:18 output.list
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas       620 Dec 13 06:18 runtime_log
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas   1280000 Dec 13 06:18 result.tar.gz
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 06:18 runtime_log.err
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas       658 Dec 13 06:18 oF0KDmvTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvJSKDmdQiWkm.diag
[2025-12-13 06:18:57] -rw-r--r-- 1 boincer umatlas     22161 Dec 13 06:18 stderr.txt
[2025-12-13 06:18:57] HITS file was successfully produced:
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas 197743452 Dec 13 06:17 shared/HITS.pool.root.1
[2025-12-13 06:18:57]  *** Contents of shared directory: ***
[2025-12-13 06:18:57] total 402660
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas 212684793 Dec 13 04:38 ATLAS.root_0
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:38 start_atlas.sh
[2025-12-13 06:18:57] -rw-r--r-- 2 boincer umatlas    592391 Dec 13 04:38 input.tar.gz
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas 197743452 Dec 13 06:17 HITS.pool.root.1
[2025-12-13 06:18:57] -rw------- 1 boincer umatlas   1280000 Dec 13 06:18 result.tar.gz
06:18:58 (3629): run_atlas exited; CPU time 65210.743705
06:18:58 (3629): called boinc_finish(0)

</stderr_txt>
]]>

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