Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:28:58 (17628): wrapper (7.7.26015): starting
04:28:58 (17628): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 04:28:58] Arguments: --nthreads 8
[2025-12-13 04:28:58] Threads: 8
[2025-12-13 04:28:58] Checking for CVMFS
[2025-12-13 04:28:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 04:28:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 04:28:58] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 04:28:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 04:28:58] 2.11.2.0 2850 60095 88680 153955 1 56 13650012 20275201 1 130560 0 11257802 99.657 4654464 22453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 04:28:58] CVMFS is ok
[2025-12-13 04:28:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 04:28:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 04:28:58] Further information can be found at the LHC@home message board.
[2025-12-13 04:28:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 04:28:58] Checking for apptainer binary...
[2025-12-13 04:28:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 04:28:58] Running /usr/bin/apptainer --version
[2025-12-13 04:28:58] apptainer version 1.3.2-1.el7
[2025-12-13 04:28:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 04:29:00] c-204-4.aglt2.org
[2025-12-13 04:29:00] apptainer works
[2025-12-13 04:29:00] Set ATHENA_PROC_NUMBER=8
[2025-12-13 04:29:00] Set ATHENA_CORE_NUMBER=8
[2025-12-13 04:29:00] Starting ATLAS job with PandaID=6929218921
[2025-12-13 04:29:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 07:24:42]  *** The last 200 lines of the pilot log: ***
[2025-12-13 07:24:42] 2025-12-13 12:23:48,061 | INFO     | time since job start (10469s) is within the limit (174528.0s)
[2025-12-13 07:24:42] 2025-12-13 12:23:49,182 | INFO     | PID=21344 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 07:24:42] 2025-12-13 12:23:49,649 | INFO     | monitor loop #770: job 0:6929218921 is in state 'finished'
[2025-12-13 07:24:42] 2025-12-13 12:23:49,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 07:24:42] 2025-12-13 12:23:50,183 | INFO     | time since job start (10471s) is within the limit (174528.0s)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,152 | INFO     | monitor loop #771: job 0:6929218921 is in state 'finished'
[2025-12-13 07:24:42] 2025-12-13 12:23:52,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,189 | INFO     | time since job start (10473s) is within the limit (174528.0s)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,189 | INFO     | 10475s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-13 07:24:42] 2025-12-13 12:23:52,932 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 07:24:42] 2025-12-13 12:23:52,935 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-13 07:24:42] 2025-12-13 12:23:52,938 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929218921/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,938 | INFO     | extracted standard info from prmon json
[2025-12-13 07:24:42] 2025-12-13 12:23:52,938 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 07:24:42] 2025-12-13 12:23:52,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 07:24:42] 2025-12-13 12:23:52,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 07:24:42] 2025-12-13 12:23:52,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 07:24:42] 2025-12-13 12:23:52,943 | INFO     | fitting pss+swap vs Time
[2025-12-13 07:24:42] 2025-12-13 12:23:52,943 | INFO     | sum of square deviations: 1550429070.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,945 | INFO     | sum of deviations: -15747711809.999998
[2025-12-13 07:24:42] 2025-12-13 12:23:52,945 | INFO     | mean x: 1765623375.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,945 | INFO     | mean y: 2557355.678362573
[2025-12-13 07:24:42] 2025-12-13 12:23:52,945 | INFO     | intersect: 17935998241.496864
[2025-12-13 07:24:42] 2025-12-13 12:23:52,946 | INFO     | chi2: 1.6348508982827492
[2025-12-13 07:24:42] 2025-12-13 12:23:52,946 | INFO     | sum of square deviations: 1418361477.5
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | sum of deviations: -14800517413.000004
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | mean x: 1765623222.5
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | mean y: 2558449.734939759
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | intersect: 18426731457.781425
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | chi2: 1.6335651360081398
[2025-12-13 07:24:42] 2025-12-13 12:23:52,948 | INFO     | current chi2=1.6335651360081398 (change=0.0786470665893741 %)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,949 | INFO     | right removable region: 165
[2025-12-13 07:24:42] 2025-12-13 12:23:52,949 | INFO     | sum of square deviations: 1418361477.5
[2025-12-13 07:24:42] 2025-12-13 12:23:52,950 | INFO     | sum of deviations: -41695993008.99999
[2025-12-13 07:24:42] 2025-12-13 12:23:52,950 | INFO     | mean x: 1765623527.5
[2025-12-13 07:24:42] 2025-12-13 12:23:52,950 | INFO     | mean y: 2586913.7108433736
[2025-12-13 07:24:42] 2025-12-13 12:23:52,950 | INFO     | intersect: 51907145396.87503
[2025-12-13 07:24:42] 2025-12-13 12:23:52,950 | INFO     | chi2: 0.1653719296076655
[2025-12-13 07:24:42] 2025-12-13 12:23:52,951 | INFO     | current chi2=0.1653719296076655 (change=89.88458643039726 %)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,951 | INFO     | sum of square deviations: 1294014960.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,952 | INFO     | sum of deviations: -38658942211.00002
[2025-12-13 07:24:42] 2025-12-13 12:23:52,952 | INFO     | mean x: 1765623680.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,952 | INFO     | mean y: 2583166.683229814
[2025-12-13 07:24:42] 2025-12-13 12:23:52,952 | INFO     | intersect: 52750925281.28536
[2025-12-13 07:24:42] 2025-12-13 12:23:52,952 | INFO     | chi2: 0.163323563373055
[2025-12-13 07:24:42] 2025-12-13 12:23:52,953 | INFO     | current chi2=0.163323563373055 (change=1.2386420352414786 %)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,953 | INFO     | left removable region: 20
[2025-12-13 07:24:42] 2025-12-13 12:23:52,953 | INFO     | sum of square deviations: 945282840.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | sum of deviations: -27750834675.999996
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | mean x: 1765623802.0
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | mean y: 2572308.124137931
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | intersect: 51836300961.563515
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | chi2: 0.15192392709872998
[2025-12-13 07:24:42] 2025-12-13 12:23:52,954 | INFO     | current memory leak: -29.36 B/s (using 145 data points, chi2=0.15)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | could have reported an average CPU frequency of 2017 MHz (9 samples)
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | ..............................
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | . Timing measurements:
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | . get job = 0 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | . initial setup = 2 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,955 | INFO     | . payload setup = 8 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,956 | INFO     | . stage-in = 0 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,956 | INFO     | . payload execution = 10432 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,956 | INFO     | . stage-out = 0 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,956 | INFO     | . log creation = 0 s
[2025-12-13 07:24:42] 2025-12-13 12:23:52,956 | INFO     | ..............................
[2025-12-13 07:24:42] 2025-12-13 12:23:53,044 | INFO     | 
[2025-12-13 07:24:42] 2025-12-13 12:23:53,045 | INFO     | job summary report
[2025-12-13 07:24:42] 2025-12-13 12:23:53,045 | INFO     | --------------------------------------------------
[2025-12-13 07:24:42] 2025-12-13 12:23:53,045 | INFO     | PanDA job id: 6929218921
[2025-12-13 07:24:42] 2025-12-13 12:23:53,045 | INFO     | task id: 47898836
[2025-12-13 07:24:42] 2025-12-13 12:23:53,045 | INFO     | errors: (none)
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | pilot state: finished 
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | transexitcode: 0
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | exeerrorcode: 0
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | exeerrordiag: 
[2025-12-13 07:24:42] 2025-12-13 12:23:53,046 | INFO     | exitcode: 0
[2025-12-13 07:24:42] 2025-12-13 12:23:53,047 | INFO     | exitmsg: OK
[2025-12-13 07:24:42] 2025-12-13 12:23:53,047 | INFO     | cpuconsumptiontime: 78580 s
[2025-12-13 07:24:42] 2025-12-13 12:23:53,047 | INFO     | nevents: 400
[2025-12-13 07:24:42] 2025-12-13 12:23:53,047 | INFO     | neventsw: 0
[2025-12-13 07:24:42] 2025-12-13 12:23:53,047 | INFO     | pid: 27809
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | pgrp: 27809
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | corecount: 8
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | event service: False
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | sizes: {0: 2283775, 1: 2284030, 7: 2284292, 12: 2284320, 10444: 2313207, 10446: 2322205, 10449: 2322389, 10456: 2322647}
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | --------------------------------------------------
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | 
[2025-12-13 07:24:42] 2025-12-13 12:23:53,048 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 07:24:42] 2025-12-13 12:23:53,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 07:24:42] 2025-12-13 12:23:53,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 07:24:42] 2025-12-13 12:23:53,082 | INFO     | job 6929218921 has completed (purged errors)
[2025-12-13 07:24:42] 2025-12-13 12:23:53,082 | INFO     | overall cleanup function is called
[2025-12-13 07:24:42] 2025-12-13 12:23:54,090 | INFO     | --- collectZombieJob: --- 10, [27809]
[2025-12-13 07:24:42] 2025-12-13 12:23:54,091 | INFO     | zombie collector waiting for pid 27809
[2025-12-13 07:24:42] 2025-12-13 12:23:54,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 07:24:42] 2025-12-13 12:23:54,091 | INFO     | collected zombie processes
[2025-12-13 07:24:42] 2025-12-13 12:23:54,091 | INFO     | will attempt to kill all subprocesses of pid=27809
[2025-12-13 07:24:42] 2025-12-13 12:23:54,182 | INFO     | process IDs to be killed: [27809] (in reverse order)
[2025-12-13 07:24:42] 2025-12-13 12:23:54,242 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 07:24:42] 2025-12-13 12:23:54,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 07:24:42] 2025-12-13 12:23:54,246 | INFO     | did not find any defunct processes belonging to 27809
[2025-12-13 07:24:42] 2025-12-13 12:23:54,249 | INFO     | did not find any defunct processes belonging to 27809
[2025-12-13 07:24:42] 2025-12-13 12:23:54,249 | INFO     | ready for new job
[2025-12-13 07:24:42] 2025-12-13 12:23:54,249 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 07:24:42] 2025-12-13 12:23:54,251 | INFO     | ***************************************
[2025-12-13 07:24:42] 2025-12-13 12:23:54,251 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 07:24:42] 2025-12-13 12:23:54,251 | INFO     | ***************************************
[2025-12-13 07:24:42] 2025-12-13 12:23:54,252 | INFO     | 
[2025-12-13 07:24:42] 2025-12-13 12:23:54,252 | INFO     | architecture information:
[2025-12-13 07:24:42] 2025-12-13 12:23:54,253 | INFO     | executing command: cat /etc/os-release
[2025-12-13 07:24:42] 2025-12-13 12:23:54,271 | INFO     | cat /etc/os-release:
[2025-12-13 07:24:42] NAME="CentOS Linux"
[2025-12-13 07:24:42] VERSION="7 (Core)"
[2025-12-13 07:24:42] ID="centos"
[2025-12-13 07:24:42] ID_LIKE="rhel fedora"
[2025-12-13 07:24:42] VERSION_ID="7"
[2025-12-13 07:24:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 07:24:42] ANSI_COLOR="0;31"
[2025-12-13 07:24:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 07:24:42] HOME_URL="https://www.centos.org/"
[2025-12-13 07:24:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 07:24:42] 
[2025-12-13 07:24:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 07:24:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 07:24:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 07:24:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 07:24:42] 
[2025-12-13 07:24:42] 2025-12-13 12:23:54,272 | INFO     | ***************************************
[2025-12-13 07:24:42] 2025-12-13 12:23:54,775 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 07:24:42] 2025-12-13 12:23:54,795 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-12-13 07:24:42] 2025-12-13 12:23:54,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 07:24:42] 2025-12-13 12:23:54,796 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 07:24:42] 2025-12-13 12:23:54,796 | INFO     | update_server=False
[2025-12-13 07:24:42] 2025-12-13 12:23:54,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 07:24:42] 2025-12-13 12:23:54,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:24:42] 2025-12-13 12:23:55,248 | INFO     | all job control threads have been joined
[2025-12-13 07:24:42] 2025-12-13 12:23:55,430 | INFO     | all data control threads have been joined
[2025-12-13 07:24:42] 2025-12-13 12:23:55,461 | INFO     | all payload control threads have been joined
[2025-12-13 07:24:42] 2025-12-13 12:23:55,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:24:42] 2025-12-13 12:23:55,661 | INFO     | aborting loop
[2025-12-13 07:24:42] 2025-12-13 12:23:55,802 | INFO     | [job] retrieve thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:55,803 | INFO     | [job] queue monitor thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 07:24:42] 2025-12-13 12:23:56,123 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,254 | INFO     | [job] control thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,261 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,323 | INFO     | [payload] failed_post thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,415 | INFO     | [payload] validate_post thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,436 | INFO     | [data] control thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,467 | INFO     | [payload] control thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 07:24:42] 2025-12-13 12:23:56,667 | INFO     | [job] job monitor thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,745 | INFO     | [data] copytool_in thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:56,901 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:57,267 | INFO     | [job] validate thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:23:58,119 | INFO     | [data] copytool_out thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:24:00,539 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:24:05,549 | INFO     | job.realtimelogging is not enabled
[2025-12-13 07:24:42] 2025-12-13 12:24:06,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 07:24:42] 2025-12-13 12:24:25,405 | INFO     | PID=21344 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 07:24:42] 2025-12-13 12:24:25,406 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 07:24:42] 2025-12-13 12:24:25,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 07:24:42] 2025-12-13 12:24:25,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 07:24:42] 2025-12-13 12:24:35,668 | INFO     | [monitor] cgroup control has ended
[2025-12-13 07:24:42] 2025-12-13 12:24:36,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728628819776)>', '<ExcThread(monitor, started 139727877424896)>']
[2025-12-13 07:24:42] 2025-12-13 12:24:37,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 07:24:42] 2025-12-13 12:24:37,467 | INFO     | [monitor] control thread has ended
[2025-12-13 07:24:42] 2025-12-13 12:24:41,797 | INFO     | all workflow threads have been joined
[2025-12-13 07:24:42] 2025-12-13 12:24:41,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 07:24:42] 2025-12-13 12:24:41,798 | INFO     | traces error code: 0
[2025-12-13 07:24:42] 2025-12-13 12:24:41,798 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 07:24:42] 2025-12-13 12:24:41,913 [wrapper] ==== pilot stdout END ====
[2025-12-13 07:24:42] 2025-12-13 12:24:41,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 07:24:42] 2025-12-13 12:24:41,922 [wrapper] pilotpid: 21344
[2025-12-13 07:24:42] 2025-12-13 12:24:41,927 [wrapper] Pilot exit status: 0
[2025-12-13 07:24:42] 2025-12-13 12:24:41,946 [wrapper] pandaids: 6929218921
[2025-12-13 07:24:42] 2025-12-13 12:24:41,999 [wrapper] cleanup supervisor_pilot  3948 21345
[2025-12-13 07:24:42] 2025-12-13 12:24:42,005 [wrapper] Test setup, not cleaning
[2025-12-13 07:24:42] 2025-12-13 12:24:42,010 [wrapper] apfmon messages muted
[2025-12-13 07:24:42] 2025-12-13 12:24:42,015 [wrapper] ==== wrapper stdout END ====
[2025-12-13 07:24:42] 2025-12-13 12:24:42,020 [wrapper] ==== wrapper stderr END ====
[2025-12-13 07:24:42]  *** Error codes and diagnostics ***
[2025-12-13 07:24:42]     "exeErrorCode": 0,
[2025-12-13 07:24:42]     "exeErrorDiag": "",
[2025-12-13 07:24:42]     "pilotErrorCode": 0,
[2025-12-13 07:24:42]     "pilotErrorDiag": "",
[2025-12-13 07:24:42]  *** Listing of results directory ***
[2025-12-13 07:24:42] total 411000
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 07:24:42] -rwx------ 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas       100 Dec 13 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 07:24:42] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 04:28 run_atlas
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas       105 Dec 13 04:28 job.xml
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas 214339183 Dec 13 04:28 EVNT.47898833._000020.pool.root.1
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:28 start_atlas.sh
[2025-12-13 07:24:42] drwxrwx--x 2 boincer umatlas      4096 Dec 13 04:28 shared
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas    592385 Dec 13 04:28 input.tar.gz
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas         0 Dec 13 04:28 boinc_lockfile
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas      2547 Dec 13 04:29 pandaJob.out
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas        57 Dec 13 04:29 setup.sh.local
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas    991736 Dec 13 04:29 agis_schedconf.cvmfs.json
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas   1516240 Dec 13 04:29 agis_ddmendpoints.agis.ALL.json
[2025-12-13 07:24:42] drwx------ 5 boincer umatlas      4096 Dec 13 04:29 pilot3
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas      5910 Dec 13 07:19 init_data.xml
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas 198901403 Dec 13 07:23 HITS.47898836._000482.pool.root.1
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas       530 Dec 13 07:23 boinc_task_state.xml
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas      1048 Dec 13 07:23 memory_monitor_summary.json
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas    401345 Dec 13 07:23 log.47898836._000482.job.log.tgz.1
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas        95 Dec 13 07:23 pilot_heartbeat.json
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas      7842 Dec 13 07:23 heartbeat.json
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 07:24 boinc_mmap_file
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas        28 Dec 13 07:24 wrapper_checkpoint.txt
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas      4818 Dec 13 07:24 pilotlog.txt
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas   1452324 Dec 13 07:24 log.47898836._000482.job.log.1
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas       357 Dec 13 07:24 output.list
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas       620 Dec 13 07:24 runtime_log
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas   1873920 Dec 13 07:24 result.tar.gz
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas       661 Dec 13 07:24 ThkMDmuTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUISKDm1K6ion.diag
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 07:24 runtime_log.err
[2025-12-13 07:24:42] -rw-r--r-- 1 boincer umatlas     21406 Dec 13 07:24 stderr.txt
[2025-12-13 07:24:42] HITS file was successfully produced:
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas 198901403 Dec 13 07:23 shared/HITS.pool.root.1
[2025-12-13 07:24:42]  *** Contents of shared directory: ***
[2025-12-13 07:24:42] total 405988
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas 214339183 Dec 13 04:28 ATLAS.root_0
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:28 start_atlas.sh
[2025-12-13 07:24:42] -rw-r--r-- 2 boincer umatlas    592385 Dec 13 04:28 input.tar.gz
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas 198901403 Dec 13 07:23 HITS.pool.root.1
[2025-12-13 07:24:42] -rw------- 1 boincer umatlas   1873920 Dec 13 07:24 result.tar.gz
07:24:43 (17628): run_atlas exited; CPU time 78466.251542
07:24:43 (17628): called boinc_finish(0)

</stderr_txt>
]]>

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