Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:58:27 (72974): wrapper (7.7.26015): starting
11:58:27 (72974): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 11:58:27] Arguments: --nthreads 4
[2025-12-13 11:58:27] Threads: 4
[2025-12-13 11:58:27] Checking for CVMFS
[2025-12-13 11:58:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 11:58:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 11:58:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 11:58:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 11:58:27] 2.9.2.0 3090 158 59348 153957 1 57 29672714 36864000 0 130560 0 182769 99.993 5457 13407 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-13 11:58:27] CVMFS is ok
[2025-12-13 11:58:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 11:58:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 11:58:27] Further information can be found at the LHC@home message board.
[2025-12-13 11:58:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 11:58:27] Checking for apptainer binary...
[2025-12-13 11:58:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 11:58:27] Running /usr/bin/apptainer --version
[2025-12-13 11:58:27] apptainer version 1.4.1-1.1
[2025-12-13 11:58:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 11:58:27] thA373a
[2025-12-13 11:58:27] apptainer works
[2025-12-13 11:58:27] Set ATHENA_PROC_NUMBER=4
[2025-12-13 11:58:27] Set ATHENA_CORE_NUMBER=4
[2025-12-13 11:58:27] Starting ATLAS job with PandaID=6929222506
[2025-12-13 11:58:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 13:14:48]  *** The last 200 lines of the pilot log: ***
[2025-12-13 13:14:48] VERSION_ID="7"
[2025-12-13 13:14:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 13:14:48] ANSI_COLOR="0;31"
[2025-12-13 13:14:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 13:14:48] HOME_URL="https://www.centos.org/"
[2025-12-13 13:14:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 13:14:48] 
[2025-12-13 13:14:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 13:14:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 13:14:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 13:14:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 13:14:48] 
[2025-12-13 13:14:48] 2025-12-13 12:13:42,080 | INFO     | ***************************************
[2025-12-13 13:14:48] 2025-12-13 12:13:42,584 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-13 13:14:48] 2025-12-13 12:13:42,601 | INFO     | sufficient remaining disk space (330908565504 B)
[2025-12-13 13:14:48] 2025-12-13 12:13:42,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 13:14:48] 2025-12-13 12:13:42,601 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 13:14:48] 2025-12-13 12:13:42,601 | INFO     | update_server=False
[2025-12-13 13:14:48] 2025-12-13 12:13:42,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 13:14:48] 2025-12-13 12:13:42,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 13:14:48] 2025-12-13 12:13:42,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 13:14:48] 2025-12-13 12:13:42,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 13:14:48] 2025-12-13 12:13:42,714 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 13:14:48] 2025-12-13 12:13:42,714 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 13:14:48] 2025-12-13 12:13:42,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 13:14:48] 2025-12-13 12:13:42,714 | INFO     | will abort loop
[2025-12-13 13:14:48] 2025-12-13 12:13:42,826 | INFO     | all payload control threads have been joined
[2025-12-13 13:14:48] 2025-12-13 12:13:43,150 | INFO     | all data control threads have been joined
[2025-12-13 13:14:48] 2025-12-13 12:13:43,607 | INFO     | [job] retrieve thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:43,608 | INFO     | [job] queue monitor thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:43,720 | INFO     | [job] job monitor thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:43,792 | INFO     | [data] copytool_in thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:43,832 | INFO     | [payload] control thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:43,974 | INFO     | all job control threads have been joined
[2025-12-13 13:14:48] 2025-12-13 12:13:44,156 | INFO     | [data] control thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,189 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,235 | INFO     | [payload] failed_post thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,568 | INFO     | [job] validate thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,608 | INFO     | [data] copytool_out thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,702 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,755 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,931 | INFO     | [payload] validate_post thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:44,980 | INFO     | [job] control thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:13:46,609 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 13:14:48] 2025-12-13 12:14:12,995 | INFO     | PID=76759 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 13:14:48] 2025-12-13 12:14:12,995 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 13:14:48] 2025-12-13 12:14:12,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 13:14:48] 2025-12-13 12:14:12,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 13:14:48] 2025-12-13 12:14:40,890 | INFO     | [monitor] cgroup control has ended
[2025-12-13 13:14:48] 2025-12-13 12:14:42,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101898483520)>', '<ExcThread(monitor, started 140100868491008)>']
[2025-12-13 13:14:48] 2025-12-13 12:14:43,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 13:14:48] 2025-12-13 12:14:43,153 | INFO     | [monitor] control thread has ended
[2025-12-13 13:14:48] 2025-12-13 12:14:47,946 | INFO     | all workflow threads have been joined
[2025-12-13 13:14:48] 2025-12-13 12:14:47,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 13:14:48] 2025-12-13 12:14:47,946 | INFO     | traces error code: 0
[2025-12-13 13:14:48] 2025-12-13 12:14:47,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 13:14:48] 2025-12-13 12:14:48,023 [wrapper] ==== pilot stdout END ====
[2025-12-13 13:14:48] 2025-12-13 12:14:48,028 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 13:14:48] 2025-12-13 12:14:48,032 [wrapper] pilotpid: 76759
[2025-12-13 13:14:48] 2025-12-13 12:14:48,036 [wrapper] Pilot exit status: 0
[2025-12-13 13:14:48] 2025-12-13 12:14:48,047 [wrapper] pandaids: 6929222506
[2025-12-13 13:14:48] 2025-12-13 12:14:48,071 [wrapper] cleanup supervisor_pilot   95883 76760
[2025-12-13 13:14:48] 2025-12-13 12:14:48,075 [wrapper] Test setup, not cleaning
[2025-12-13 13:14:48] 2025-12-13 12:14:48,078 [wrapper] apfmon messages muted
[2025-12-13 13:14:48] 2025-12-13 12:14:48,082 [wrapper] ==== wrapper stdout END ====
[2025-12-13 13:14:48] 2025-12-13 12:14:48,086 [wrapper] ==== wrapper stderr END ====
[2025-12-13 13:14:48]  *** Error codes and diagnostics ***
[2025-12-13 13:14:48]     "exeErrorCode": 0,
[2025-12-13 13:14:48]     "exeErrorDiag": "",
[2025-12-13 13:14:48]     "pilotErrorCode": 0,
[2025-12-13 13:14:48]     "pilotErrorDiag": "",
[2025-12-13 13:14:48]  *** Listing of results directory ***
[2025-12-13 13:14:48] total 336732
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc    579449 Dec 13 09:48 pilot3.tar.gz
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      5112 Dec 13 09:48 queuedata.json
[2025-12-13 13:14:48] -rwx------ 1 boinc boinc     36322 Dec 13 09:48 runpilot2-wrapper.sh
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc       100 Dec 13 11:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 13:14:48] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 11:58 run_atlas
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc       105 Dec 13 11:58 job.xml
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc 193359123 Dec 13 11:58 EVNT.47886829._000179.pool.root.1
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc    592418 Dec 13 11:58 input.tar.gz
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc     15847 Dec 13 11:58 start_atlas.sh
[2025-12-13 13:14:48] drwxrwx--x 2 boinc boinc      4096 Dec 13 11:58 shared
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc         0 Dec 13 11:58 boinc_setup_complete
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      6378 Dec 13 11:58 init_data.xml
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc         0 Dec 13 11:58 boinc_lockfile
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      2537 Dec 13 11:58 pandaJob.out
[2025-12-13 13:14:48] -rw------- 1 boinc boinc    991728 Dec 13 11:58 agis_schedconf.cvmfs.json
[2025-12-13 13:14:48] -rw------- 1 boinc boinc   1516240 Dec 13 11:58 agis_ddmendpoints.agis.ALL.json
[2025-12-13 13:14:48] drwx------ 5 boinc boinc      4096 Dec 13 11:58 pilot3
[2025-12-13 13:14:48] -rw------- 1 boinc boinc 145679951 Dec 13 13:13 HITS.47886831._004473.pool.root.1
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc       529 Dec 13 13:13 boinc_task_state.xml
[2025-12-13 13:14:48] -rw------- 1 boinc boinc      1022 Dec 13 13:13 memory_monitor_summary.json
[2025-12-13 13:14:48] -rw------- 1 boinc boinc    269253 Dec 13 13:13 log.47886831._004473.job.log.tgz.1
[2025-12-13 13:14:48] -rw------- 1 boinc boinc      7757 Dec 13 13:13 heartbeat.json
[2025-12-13 13:14:48] -rw------- 1 boinc boinc        95 Dec 13 13:14 pilot_heartbeat.json
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      8192 Dec 13 13:14 boinc_mmap_file
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc        27 Dec 13 13:14 wrapper_checkpoint.txt
[2025-12-13 13:14:48] -rw------- 1 boinc boinc      4936 Dec 13 13:14 pilotlog.txt
[2025-12-13 13:14:48] -rw------- 1 boinc boinc    665272 Dec 13 13:14 log.47886831._004473.job.log.1
[2025-12-13 13:14:48] -rw------- 1 boinc boinc       357 Dec 13 13:14 output.list
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc       620 Dec 13 13:14 runtime_log
[2025-12-13 13:14:48] -rw------- 1 boinc boinc    952320 Dec 13 13:14 result.tar.gz
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      8902 Dec 13 13:14 runtime_log.err
[2025-12-13 13:14:48] -rw------- 1 boinc boinc       659 Dec 13 13:14 FbeMDmnTao8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6BOKDmn8xs7n.diag
[2025-12-13 13:14:48] -rw-r--r-- 1 boinc boinc      8763 Dec 13 13:14 stderr.txt
[2025-12-13 13:14:48] HITS file was successfully produced:
[2025-12-13 13:14:48] -rw------- 1 boinc boinc 145679951 Dec 13 13:13 shared/HITS.pool.root.1
[2025-12-13 13:14:48]  *** Contents of shared directory: ***
[2025-12-13 13:14:48] total 332632
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc 193359123 Dec 13 11:58 ATLAS.root_0
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc    592418 Dec 13 11:58 input.tar.gz
[2025-12-13 13:14:48] -rw-r--r-- 2 boinc boinc     15847 Dec 13 11:58 start_atlas.sh
[2025-12-13 13:14:48] -rw------- 1 boinc boinc 145679951 Dec 13 13:13 HITS.pool.root.1
[2025-12-13 13:14:48] -rw------- 1 boinc boinc    952320 Dec 13 13:14 result.tar.gz
13:14:49 (72974): run_atlas exited; CPU time 16910.131922
13:14:49 (72974): called boinc_finish(0)

</stderr_txt>
]]>

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