Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:54 (453095): wrapper (7.7.26015): starting
01:26:54 (453095): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 01:26:55] Arguments: --nthreads 8
[2025-12-13 01:26:55] Threads: 8
[2025-12-13 01:26:55] Checking for CVMFS
[2025-12-13 01:26:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 01:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 01:26:56] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 01:26:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 01:26:57] 2.11.3.0 3753445 17591 259204 153955 0 194 32105016 45568000 9771 130560 0 56362790 99.646 56825649 18612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 01:26:57] CVMFS is ok
[2025-12-13 01:26:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 01:26:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 01:26:57] Further information can be found at the LHC@home message board.
[2025-12-13 01:26:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 01:26:57] Checking for apptainer binary...
[2025-12-13 01:26:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 01:26:57] Running /usr/bin/apptainer --version
[2025-12-13 01:26:57] apptainer version 1.4.1-1.el9
[2025-12-13 01:26:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 01:26:58] wns0010.triumf.lcg
[2025-12-13 01:26:58] apptainer works
[2025-12-13 01:26:59] Set ATHENA_PROC_NUMBER=8
[2025-12-13 01:26:59] Set ATHENA_CORE_NUMBER=8
[2025-12-13 01:26:59] Starting ATLAS job with PandaID=6929219067
[2025-12-13 01:26:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 01:35:06]  *** The last 200 lines of the pilot log: ***
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | WARNING  | wrong length of table data, x=[1765618229.0, 1765618290.0], y=[20390.0, 575770.0] (must be same and length>=4)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . Timing measurements:
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . get job = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . initial setup = 7 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . payload setup = 42 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-in = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . payload execution = 106 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-out = 2 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . log creation = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929219067/pilotlog.txt
[2025-12-13 01:35:06] 2025-12-13 09:34:22,763 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 01:35:06] - Log from pilotlog.txt -
[2025-12-13 01:35:06] 2025-12-13 09:34:22,593 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929219067/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | INFO     | extracted standard info from prmon json
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | WARNING  | wrong length of table data, x=[1765618229.0, 1765618290.0], y=[20390.0, 575770.0] (must be same and length>=4)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . Timing measurements:
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . get job = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . initial setup = 7 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . payload setup = 42 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-in = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . payload execution = 106 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-out = 2 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . log creation = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929219067/pilotlog.txt
[2025-12-13 01:35:06] 2025-12-13 09:34:22,764 | WARNING  | 
[2025-12-13 01:35:06] [begin log extracts]
[2025-12-13 01:35:06] - Log from pilotlog.txt -
[2025-12-13 01:35:06] 2025-12-13 09:34:22,593 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929219067/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | INFO     | extracted standard info from prmon json
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:35:06] 2025-12-13 09:34:22,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | WARNING  | wrong length of table data, x=[1765618229.0, 1765618290.0], y=[20390.0, 575770.0] (must be same and length>=4)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . Timing measurements:
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . get job = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . initial setup = 7 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,595 | INFO     | . payload setup = 42 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-in = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . payload execution = 106 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . stage-out = 2 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | . log creation = 0 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | ..............................
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:35:06] 2025-12-13 09:34:22,596 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929219067/pilotlog.txt
[2025-12-13 01:35:06] [end log extracts]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,764 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,764 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 01:35:06] 2025-12-13 09:34:22,846 | INFO     | 
[2025-12-13 01:35:06] 2025-12-13 09:34:22,846 | INFO     | job summary report
[2025-12-13 01:35:06] 2025-12-13 09:34:22,846 | INFO     | --------------------------------------------------
[2025-12-13 01:35:06] 2025-12-13 09:34:22,846 | INFO     | PanDA job id: 6929219067
[2025-12-13 01:35:06] 2025-12-13 09:34:22,846 | INFO     | task id: 47886933
[2025-12-13 01:35:06] 2025-12-13 09:34:22,847 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 01:31:33,882 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 01:35:06] 2025-12-13 09:34:22,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 01:35:06] 2025-12-13 09:34:22,847 | INFO     | pilot state: failed 
[2025-12-13 01:35:06] 2025-12-13 09:34:22,847 | INFO     | transexitcode: 65
[2025-12-13 01:35:06] 2025-12-13 09:34:22,847 | INFO     | exeerrorcode: 65
[2025-12-13 01:35:06] 2025-12-13 09:34:22,856 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,856 | INFO     | exitcode: 65
[2025-12-13 01:35:06] 2025-12-13 09:34:22,856 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,856 | INFO     | cpuconsumptiontime: 18 s
[2025-12-13 01:35:06] 2025-12-13 09:34:22,856 | INFO     | nevents: 0
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | neventsw: 0
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | pid: 463777
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | pgrp: 463777
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | corecount: 8
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | event service: False
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | sizes: {0: 2283134, 1: 2283732, 2: 2284015, 14: 2284015, 25: 2284043, 29: 2284333, 36: 2284489, 154: 2307703, 157: 2312051, 308: 2312189}
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | --------------------------------------------------
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | 
[2025-12-13 01:35:06] 2025-12-13 09:34:22,857 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 01:35:06] 2025-12-13 09:34:22,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | job 6929219067 has completed (purged errors)
[2025-12-13 01:35:06] 2025-12-13 09:34:22,938 | INFO     | overall cleanup function is called
[2025-12-13 01:35:06] 2025-12-13 09:34:23,945 | INFO     | --- collectZombieJob: --- 10, [463777]
[2025-12-13 01:35:06] 2025-12-13 09:34:23,945 | INFO     | zombie collector waiting for pid 463777
[2025-12-13 01:35:06] 2025-12-13 09:34:23,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 01:35:06] 2025-12-13 09:34:23,945 | INFO     | collected zombie processes
[2025-12-13 01:35:06] 2025-12-13 09:34:23,945 | INFO     | will attempt to kill all subprocesses of pid=463777
[2025-12-13 01:35:06] 2025-12-13 09:34:24,835 | INFO     | process IDs to be killed: [463777] (in reverse order)
[2025-12-13 01:35:06] 2025-12-13 09:34:25,304 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 01:35:06] 2025-12-13 09:34:25,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 01:35:06] 2025-12-13 09:34:25,350 | INFO     | did not find any defunct processes belonging to 463777
[2025-12-13 01:35:06] 2025-12-13 09:34:25,359 | INFO     | did not find any defunct processes belonging to 463777
[2025-12-13 01:35:06] 2025-12-13 09:34:25,372 | INFO     | ready for new job
[2025-12-13 01:35:06] 2025-12-13 09:34:25,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 01:35:06] 2025-12-13 09:34:25,374 | INFO     | ***************************************
[2025-12-13 01:35:06] 2025-12-13 09:34:25,374 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 01:35:06] 2025-12-13 09:34:25,374 | INFO     | ***************************************
[2025-12-13 01:35:06] 2025-12-13 09:34:25,374 | INFO     | 
[2025-12-13 01:35:06] 2025-12-13 09:34:25,376 | INFO     | architecture information:
[2025-12-13 01:35:06] 2025-12-13 09:34:25,376 | INFO     | executing command: cat /etc/os-release
[2025-12-13 01:35:06] 2025-12-13 09:34:25,411 | INFO     | cat /etc/os-release:
[2025-12-13 01:35:06] NAME="CentOS Linux"
[2025-12-13 01:35:06] VERSION="7 (Core)"
[2025-12-13 01:35:06] ID="centos"
[2025-12-13 01:35:06] ID_LIKE="rhel fedora"
[2025-12-13 01:35:06] VERSION_ID="7"
[2025-12-13 01:35:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 01:35:06] ANSI_COLOR="0;31"
[2025-12-13 01:35:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 01:35:06] HOME_URL="https://www.centos.org/"
[2025-12-13 01:35:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 01:35:06] 
[2025-12-13 01:35:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 01:35:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 01:35:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 01:35:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 01:35:06] 
[2025-12-13 01:35:06] 2025-12-13 09:34:25,411 | INFO     | ***************************************
[2025-12-13 01:35:06] 2025-12-13 09:34:25,914 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 01:35:06] 2025-12-13 09:34:25,962 | INFO     | sufficient remaining disk space (1356357173248 B)
[2025-12-13 01:35:06] 2025-12-13 09:34:25,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 01:35:06] 2025-12-13 09:34:25,962 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 01:35:06] 2025-12-13 09:34:25,962 | INFO     | update_server=False
[2025-12-13 01:35:06] 2025-12-13 09:34:25,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 01:35:06] 2025-12-13 09:34:25,988 | INFO     | all data control threads have been joined
[2025-12-13 01:35:06] 2025-12-13 09:34:26,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 01:35:06] 2025-12-13 09:34:26,225 | INFO     | all payload control threads have been joined
[2025-12-13 01:35:06] 2025-12-13 09:34:26,397 | INFO     | all job control threads have been joined
[2025-12-13 01:35:06] 2025-12-13 09:34:26,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:35:06] 2025-12-13 09:34:26,572 | INFO     | aborting loop
[2025-12-13 01:35:06] 2025-12-13 09:34:26,968 | INFO     | [job] retrieve thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:26,994 | INFO     | [data] control thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,110 | INFO     | [payload] failed_post thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,116 | INFO     | [payload] validate_post thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,124 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,231 | INFO     | [payload] control thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,403 | INFO     | [job] control thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 01:35:06] 2025-12-13 09:34:27,578 | INFO     | [job] job monitor thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,692 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,739 | INFO     | [data] copytool_in thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:35:06] 2025-12-13 09:34:27,899 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:27,927 | INFO     | [job] validate thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:28,058 | INFO     | [data] copytool_out thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:28,869 | INFO     | [job] queue monitor thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:31,569 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 01:35:06] 2025-12-13 09:34:54,139 | INFO     | 392s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-13 01:35:06] 2025-12-13 09:34:55,506 | INFO     | PID=456870 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 01:35:06] 2025-12-13 09:34:55,506 | INFO     | .. there are 26 such processes running
[2025-12-13 01:35:06] 2025-12-13 09:34:55,506 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 01:35:06] 2025-12-13 09:34:55,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 01:35:06] 2025-12-13 09:34:55,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 01:35:06] 2025-12-13 09:34:59,397 | INFO     | [monitor] cgroup control has ended
[2025-12-13 01:35:06] 2025-12-13 09:35:01,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708638054208)>', '<ExcThread(monitor, started 140707952060160)>']
[2025-12-13 01:35:06] 2025-12-13 09:35:01,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 01:35:06] 2025-12-13 09:35:01,542 | INFO     | [monitor] control thread has ended
[2025-12-13 01:35:06] 2025-12-13 09:35:06,505 | INFO     | all workflow threads have been joined
[2025-12-13 01:35:06] 2025-12-13 09:35:06,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 01:35:06] 2025-12-13 09:35:06,506 | INFO     | traces error code: 0
[2025-12-13 01:35:06] 2025-12-13 09:35:06,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 01:35:06] 2025-12-13 09:35:06,606 [wrapper] ==== pilot stdout END ====
[2025-12-13 01:35:06] 2025-12-13 09:35:06,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 01:35:06] 2025-12-13 09:35:06,609 [wrapper] pilotpid: 456870
[2025-12-13 01:35:06] 2025-12-13 09:35:06,611 [wrapper] Pilot exit status: 0
[2025-12-13 01:35:06] 2025-12-13 09:35:06,639 [wrapper] pandaids: 6929219067
[2025-12-13 01:35:06] 2025-12-13 09:35:06,676 [wrapper] cleanup supervisor_pilot  456876 456871
[2025-12-13 01:35:06] 2025-12-13 09:35:06,678 [wrapper] Test setup, not cleaning
[2025-12-13 01:35:06] 2025-12-13 09:35:06,680 [wrapper] apfmon messages muted
[2025-12-13 01:35:06] 2025-12-13 09:35:06,682 [wrapper] ==== wrapper stdout END ====
[2025-12-13 01:35:06] 2025-12-13 09:35:06,683 [wrapper] ==== wrapper stderr END ====
[2025-12-13 01:35:06]  *** Error codes and diagnostics ***
[2025-12-13 01:35:06]     "exeErrorCode": 65,
[2025-12-13 01:35:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 01:35:06]     "pilotErrorCode": 1305,
[2025-12-13 01:35:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 01:35:06]  *** Listing of results directory ***
[2025-12-13 01:35:06] total 193880
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc    579449 Dec 13 00:48 pilot3.tar.gz
[2025-12-13 01:35:06] -rwx------. 1 boinc boinc     36322 Dec 13 00:48 runpilot2-wrapper.sh
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc      5112 Dec 13 00:48 queuedata.json
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc       100 Dec 13 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 01:35:06] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 01:26 run_atlas
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc       105 Dec 13 01:26 job.xml
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc      6446 Dec 13 01:26 init_data.xml
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc 194364036 Dec 13 01:26 EVNT.47886929._000053.pool.root.1
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:26 start_atlas.sh
[2025-12-13 01:35:06] drwxrwx--x. 2 boinc boinc      4096 Dec 13 01:26 shared
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc    592396 Dec 13 01:26 input.tar.gz
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc         0 Dec 13 01:26 boinc_lockfile
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc      2511 Dec 13 01:26 pandaJob.out
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc    991736 Dec 13 01:27 agis_schedconf.cvmfs.json
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc   1516240 Dec 13 01:27 agis_ddmendpoints.agis.ALL.json
[2025-12-13 01:35:06] drwx------. 5 boinc boinc      4096 Dec 13 01:27 pilot3
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc       524 Dec 13 01:31 boinc_task_state.xml
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc       986 Dec 13 01:31 memory_monitor_summary.json
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc     22337 Dec 13 01:31 log.47886933._001322.job.log.tgz.1
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc        95 Dec 13 01:33 pilot_heartbeat.json
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc      8406 Dec 13 01:34 heartbeat.json
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc      8192 Dec 13 01:35 boinc_mmap_file
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc        23 Dec 13 01:35 wrapper_checkpoint.txt
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc      4936 Dec 13 01:35 pilotlog.txt
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc    105905 Dec 13 01:35 log.47886933._001322.job.log.1
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc       188 Dec 13 01:35 output.list
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc       620 Dec 13 01:35 runtime_log
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc    143360 Dec 13 01:35 result.tar.gz
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc      8634 Dec 13 01:35 runtime_log.err
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc       644 Dec 13 01:35 5fsKDmaTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxFSKDm2M34Ln.diag
[2025-12-13 01:35:06] -rw-r--r--. 1 boinc boinc     21459 Dec 13 01:35 stderr.txt
[2025-12-13 01:35:06] No HITS result produced
[2025-12-13 01:35:06]  *** Contents of shared directory: ***
[2025-12-13 01:35:06] total 190552
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc 194364036 Dec 13 01:26 ATLAS.root_0
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:26 start_atlas.sh
[2025-12-13 01:35:06] -rw-r--r--. 2 boinc boinc    592396 Dec 13 01:26 input.tar.gz
[2025-12-13 01:35:06] -rw-------. 1 boinc boinc    143360 Dec 13 01:35 result.tar.gz
01:35:07 (453095): run_atlas exited; CPU time 32.888874
01:35:07 (453095): called boinc_finish(0)

</stderr_txt>
]]>

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