Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:11:01 (6283): wrapper (7.7.26015): starting
04:11:01 (6283): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 04:11:01] Arguments: --nthreads 8
[2025-12-13 04:11:01] Threads: 8
[2025-12-13 04:11:01] Checking for CVMFS
[2025-12-13 04:11:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 04:11:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 04:11:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 04:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 04:11:01] 2.11.2.0 11495 141983 135152 153954 3 57 15535793 18432000 1833 130560 0 98151039 99.977 5775370 26381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 04:11:01] CVMFS is ok
[2025-12-13 04:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 04:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 04:11:01] Further information can be found at the LHC@home message board.
[2025-12-13 04:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 04:11:01] Checking for apptainer binary...
[2025-12-13 04:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 04:11:01] Running /usr/bin/apptainer --version
[2025-12-13 04:11:01] apptainer version 1.3.2-1.el7
[2025-12-13 04:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 04:11:02] c-206-31.aglt2.org
[2025-12-13 04:11:02] apptainer works
[2025-12-13 04:11:02] Set ATHENA_PROC_NUMBER=8
[2025-12-13 04:11:02] Set ATHENA_CORE_NUMBER=8
[2025-12-13 04:11:02] Starting ATLAS job with PandaID=6929219065
[2025-12-13 04:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 07:22:45]  *** The last 200 lines of the pilot log: ***
[2025-12-13 07:22:45] 2025-12-13 12:22:28,257 | INFO     | monitor loop #829: job 0:6929219065 is in state 'finished'
[2025-12-13 07:22:45] 2025-12-13 12:22:28,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,855 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 07:22:45] 2025-12-13 12:22:29,862 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2405.8333333333335
[2025-12-13 07:22:45] 2025-12-13 12:22:29,866 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6929219065/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,867 | INFO     | extracted standard info from prmon json
[2025-12-13 07:22:45] 2025-12-13 12:22:29,868 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 07:22:45] 2025-12-13 12:22:29,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 07:22:45] 2025-12-13 12:22:29,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 07:22:45] 2025-12-13 12:22:29,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 07:22:45] 2025-12-13 12:22:29,874 | INFO     | fitting pss+swap vs Time
[2025-12-13 07:22:45] 2025-12-13 12:22:29,875 | INFO     | sum of square deviations: 2060343747.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,876 | INFO     | sum of deviations: 31269734600.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,876 | INFO     | mean x: 1765622801.5
[2025-12-13 07:22:45] 2025-12-13 12:22:29,877 | INFO     | mean y: 2460118.1170212766
[2025-12-13 07:22:45] 2025-12-13 12:22:29,877 | INFO     | intersect: -26794309346.688934
[2025-12-13 07:22:45] 2025-12-13 12:22:29,877 | INFO     | chi2: 1.4681786707214124
[2025-12-13 07:22:45] 2025-12-13 12:22:29,878 | INFO     | sum of square deviations: 1900284932.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,879 | INFO     | sum of deviations: 30291281424.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,880 | INFO     | mean x: 1765622649.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,880 | INFO     | mean y: 2459185.655737705
[2025-12-13 07:22:45] 2025-12-13 12:22:29,880 | INFO     | intersect: -28142253035.557293
[2025-12-13 07:22:45] 2025-12-13 12:22:29,880 | INFO     | chi2: 1.468945964833605
[2025-12-13 07:22:45] 2025-12-13 12:22:29,881 | INFO     | current chi2=1.468945964833605 (change=-0.05226163051500677 %)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,881 | INFO     | right removable region: 182
[2025-12-13 07:22:45] 2025-12-13 12:22:29,881 | INFO     | sum of square deviations: 1900284932.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,882 | INFO     | sum of deviations: 2497636155.0000005
[2025-12-13 07:22:45] 2025-12-13 12:22:29,882 | INFO     | mean x: 1765622954.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,882 | INFO     | mean y: 2487220.038251366
[2025-12-13 07:22:45] 2025-12-13 12:22:29,882 | INFO     | intersect: -2318156201.2443748
[2025-12-13 07:22:45] 2025-12-13 12:22:29,882 | INFO     | chi2: 0.031513032727228836
[2025-12-13 07:22:45] 2025-12-13 12:22:29,883 | INFO     | current chi2=0.031513032727228836 (change=97.8535968846527 %)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,883 | INFO     | sum of square deviations: 1748737904.5
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | sum of deviations: -1221588348.5
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | mean x: 1765623106.5
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | mean y: 2490978.353932584
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | intersect: 1235874556.9865844
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | chi2: 0.004941383964210333
[2025-12-13 07:22:45] 2025-12-13 12:22:29,884 | INFO     | current chi2=0.004941383964210333 (change=84.31955436665818 %)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,885 | INFO     | sum of square deviations: 1605470102.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,885 | INFO     | sum of deviations: -1827607397.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,885 | INFO     | mean x: 1765623259.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | mean y: 2491617.49132948
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | intersect: 2012411406.3704915
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | chi2: 0.0041832199301917155
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | current chi2=0.0041832199301917155 (change=15.343151625331695 %)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | left removable region: 30
[2025-12-13 07:22:45] 2025-12-13 12:22:29,886 | INFO     | sum of square deviations: 1088905998.0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,887 | INFO     | sum of deviations: -1502579145.0000002
[2025-12-13 07:22:45] 2025-12-13 12:22:29,887 | INFO     | mean x: 1765623533.5
[2025-12-13 07:22:45] 2025-12-13 12:22:29,887 | INFO     | mean y: 2490955.1447368423
[2025-12-13 07:22:45] 2025-12-13 12:22:29,888 | INFO     | intersect: 2438871234.279088
[2025-12-13 07:22:45] 2025-12-13 12:22:29,888 | INFO     | chi2: 0.0039182120248352475
[2025-12-13 07:22:45] 2025-12-13 12:22:29,888 | INFO     | current memory leak: -1.38 B/s (using 152 data points, chi2=0.00)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,888 | INFO     | could have reported an average CPU frequency of 2536 MHz (10 samples)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,888 | INFO     | ..............................
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . Timing measurements:
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . get job = 0 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . initial setup = 2 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . payload setup = 4 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . stage-in = 0 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . payload execution = 11442 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . stage-out = 2 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | . log creation = 0 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,889 | INFO     | ..............................
[2025-12-13 07:22:45] 2025-12-13 12:22:29,964 | INFO     | time since job start (11476s) is within the limit (174528.0s)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | 
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | job summary report
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | --------------------------------------------------
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | PanDA job id: 6929219065
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | task id: 47886933
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | errors: (none)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | pilot state: finished 
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | transexitcode: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | exeerrorcode: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | exeerrordiag: 
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | exitcode: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | exitmsg: OK
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | cpuconsumptiontime: 86533 s
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | nevents: 400
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | neventsw: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:29,966 | INFO     | pid: 16445
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | pgrp: 16445
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | corecount: 8
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | event service: False
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | sizes: {0: 2283791, 1: 2283990, 4: 2284252, 12: 2284280, 11450: 2313655, 11453: 2322653, 11455: 2322865, 11461: 2323059}
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | --------------------------------------------------
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | 
[2025-12-13 07:22:45] 2025-12-13 12:22:29,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | job 6929219065 has completed (purged errors)
[2025-12-13 07:22:45] 2025-12-13 12:22:29,986 | INFO     | overall cleanup function is called
[2025-12-13 07:22:45] 2025-12-13 12:22:30,993 | INFO     | --- collectZombieJob: --- 10, [16445]
[2025-12-13 07:22:45] 2025-12-13 12:22:30,993 | INFO     | zombie collector waiting for pid 16445
[2025-12-13 07:22:45] 2025-12-13 12:22:30,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 07:22:45] 2025-12-13 12:22:30,993 | INFO     | collected zombie processes
[2025-12-13 07:22:45] 2025-12-13 12:22:30,993 | INFO     | will attempt to kill all subprocesses of pid=16445
[2025-12-13 07:22:45] 2025-12-13 12:22:31,158 | INFO     | process IDs to be killed: [16445] (in reverse order)
[2025-12-13 07:22:45] 2025-12-13 12:22:31,204 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 07:22:45] 2025-12-13 12:22:31,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 07:22:45] 2025-12-13 12:22:31,207 | INFO     | did not find any defunct processes belonging to 16445
[2025-12-13 07:22:45] 2025-12-13 12:22:31,209 | INFO     | did not find any defunct processes belonging to 16445
[2025-12-13 07:22:45] 2025-12-13 12:22:31,209 | INFO     | ready for new job
[2025-12-13 07:22:45] 2025-12-13 12:22:31,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 07:22:45] 2025-12-13 12:22:31,211 | INFO     | ***************************************
[2025-12-13 07:22:45] 2025-12-13 12:22:31,211 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 07:22:45] 2025-12-13 12:22:31,211 | INFO     | ***************************************
[2025-12-13 07:22:45] 2025-12-13 12:22:31,211 | INFO     | 
[2025-12-13 07:22:45] 2025-12-13 12:22:31,212 | INFO     | architecture information:
[2025-12-13 07:22:45] 2025-12-13 12:22:31,212 | INFO     | executing command: cat /etc/os-release
[2025-12-13 07:22:45] 2025-12-13 12:22:31,227 | INFO     | cat /etc/os-release:
[2025-12-13 07:22:45] NAME="CentOS Linux"
[2025-12-13 07:22:45] VERSION="7 (Core)"
[2025-12-13 07:22:45] ID="centos"
[2025-12-13 07:22:45] ID_LIKE="rhel fedora"
[2025-12-13 07:22:45] VERSION_ID="7"
[2025-12-13 07:22:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 07:22:45] ANSI_COLOR="0;31"
[2025-12-13 07:22:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 07:22:45] HOME_URL="https://www.centos.org/"
[2025-12-13 07:22:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 07:22:45] 
[2025-12-13 07:22:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 07:22:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 07:22:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 07:22:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 07:22:45] 
[2025-12-13 07:22:45] 2025-12-13 12:22:31,227 | INFO     | ***************************************
[2025-12-13 07:22:45] 2025-12-13 12:22:31,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 07:22:45] 2025-12-13 12:22:31,754 | INFO     | sufficient remaining disk space (28448915456 B)
[2025-12-13 07:22:45] 2025-12-13 12:22:31,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 07:22:45] 2025-12-13 12:22:31,755 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 07:22:45] 2025-12-13 12:22:31,755 | INFO     | update_server=False
[2025-12-13 07:22:45] 2025-12-13 12:22:31,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 07:22:45] 2025-12-13 12:22:31,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:22:45] 2025-12-13 12:22:31,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-13 07:22:45] 2025-12-13 12:22:31,756 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 07:22:45] 2025-12-13 12:22:31,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 07:22:45] 2025-12-13 12:22:31,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 07:22:45] 2025-12-13 12:22:31,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:22:45] 2025-12-13 12:22:31,765 | INFO     | aborting loop
[2025-12-13 07:22:45] 2025-12-13 12:22:31,842 | INFO     | all data control threads have been joined
[2025-12-13 07:22:45] 2025-12-13 12:22:31,971 | INFO     | [monitor] cgroup control has ended
[2025-12-13 07:22:45] 2025-12-13 12:22:32,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 07:22:45] 2025-12-13 12:22:32,470 | INFO     | all job control threads have been joined
[2025-12-13 07:22:45] 2025-12-13 12:22:32,662 | INFO     | all payload control threads have been joined
[2025-12-13 07:22:45] 2025-12-13 12:22:32,760 | INFO     | [job] retrieve thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:32,761 | INFO     | [job] queue monitor thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:32,770 | INFO     | [job] job monitor thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:32,847 | INFO     | [data] control thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,165 | INFO     | [payload] validate_post thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,416 | INFO     | [payload] failed_post thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,462 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,465 | INFO     | [data] copytool_in thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,475 | INFO     | [job] control thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,480 | INFO     | [job] validate thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,667 | INFO     | [payload] control thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,717 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:33,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:34,182 | INFO     | [data] copytool_out thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:34,196 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:34,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 07:22:45] 2025-12-13 12:22:38,288 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 07:22:45] 2025-12-13 12:22:39,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712234288960)>', '<ExcThread(monitor, started 139711511254784)>']
[2025-12-13 07:22:45] 2025-12-13 12:22:40,802 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 07:22:45] 2025-12-13 12:22:40,802 | INFO     | [monitor] control thread has ended
[2025-12-13 07:22:45] 2025-12-13 12:22:45,007 | INFO     | all workflow threads have been joined
[2025-12-13 07:22:45] 2025-12-13 12:22:45,007 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 07:22:45] 2025-12-13 12:22:45,007 | INFO     | traces error code: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:45,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 07:22:45] 2025-12-13 12:22:45,125 [wrapper] ==== pilot stdout END ====
[2025-12-13 07:22:45] 2025-12-13 12:22:45,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 07:22:45] 2025-12-13 12:22:45,130 [wrapper] pilotpid: 10017
[2025-12-13 07:22:45] 2025-12-13 12:22:45,132 [wrapper] Pilot exit status: 0
[2025-12-13 07:22:45] 2025-12-13 12:22:45,142 [wrapper] pandaids: 6929219065
[2025-12-13 07:22:45] 2025-12-13 12:22:45,180 [wrapper] cleanup supervisor_pilot  6629 10018
[2025-12-13 07:22:45] 2025-12-13 12:22:45,183 [wrapper] Test setup, not cleaning
[2025-12-13 07:22:45] 2025-12-13 12:22:45,186 [wrapper] apfmon messages muted
[2025-12-13 07:22:45] 2025-12-13 12:22:45,189 [wrapper] ==== wrapper stdout END ====
[2025-12-13 07:22:45] 2025-12-13 12:22:45,191 [wrapper] ==== wrapper stderr END ====
[2025-12-13 07:22:45]  *** Error codes and diagnostics ***
[2025-12-13 07:22:45]     "exeErrorCode": 0,
[2025-12-13 07:22:45]     "exeErrorDiag": "",
[2025-12-13 07:22:45]     "pilotErrorCode": 0,
[2025-12-13 07:22:45]     "pilotErrorDiag": "",
[2025-12-13 07:22:45]  *** Listing of results directory ***
[2025-12-13 07:22:45] total 346892
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 03:48 queuedata.json
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 03:48 pilot3.tar.gz
[2025-12-13 07:22:45] -rwx------ 1 boincer umatlas     36322 Dec 13 03:48 runpilot2-wrapper.sh
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas       100 Dec 13 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 07:22:45] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 04:10 run_atlas
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas       105 Dec 13 04:10 job.xml
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas 194364036 Dec 13 04:11 EVNT.47886929._000053.pool.root.1
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:11 start_atlas.sh
[2025-12-13 07:22:45] drwxrwx--x 2 boincer umatlas      4096 Dec 13 04:11 shared
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 04:11 input.tar.gz
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas         0 Dec 13 04:11 boinc_lockfile
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas      2511 Dec 13 04:11 pandaJob.out
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas        57 Dec 13 04:11 setup.sh.local
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas    991736 Dec 13 04:11 agis_schedconf.cvmfs.json
[2025-12-13 07:22:45] drwx------ 5 boincer umatlas      4096 Dec 13 04:11 pilot3
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas 152851272 Dec 13 07:21 HITS.47886933._001320.pool.root.1
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas        95 Dec 13 07:22 pilot_heartbeat.json
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas      1054 Dec 13 07:22 memory_monitor_summary.json
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas   1516240 Dec 13 07:22 agis_ddmendpoints.agis.ALL.json
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas    428841 Dec 13 07:22 log.47886933._001320.job.log.tgz.1
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas       530 Dec 13 07:22 boinc_task_state.xml
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas      7855 Dec 13 07:22 heartbeat.json
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 07:22 init_data.xml
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 07:22 boinc_mmap_file
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas        28 Dec 13 07:22 wrapper_checkpoint.txt
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas      4552 Dec 13 07:22 pilotlog.txt
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas   1611806 Dec 13 07:22 log.47886933._001320.job.log.1
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas       357 Dec 13 07:22 output.list
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas       620 Dec 13 07:22 runtime_log
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas   2058240 Dec 13 07:22 result.tar.gz
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas       662 Dec 13 07:22 vRqKDmaTao8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwFSKDmBzhFzn.diag
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 07:22 runtime_log.err
[2025-12-13 07:22:45] -rw-r--r-- 1 boincer umatlas     21045 Dec 13 07:22 stderr.txt
[2025-12-13 07:22:45] HITS file was successfully produced:
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas 152851272 Dec 13 07:21 shared/HITS.pool.root.1
[2025-12-13 07:22:45]  *** Contents of shared directory: ***
[2025-12-13 07:22:45] total 341696
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas 194364036 Dec 13 04:11 ATLAS.root_0
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 04:11 start_atlas.sh
[2025-12-13 07:22:45] -rw-r--r-- 2 boincer umatlas    592396 Dec 13 04:11 input.tar.gz
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas 152851272 Dec 13 07:21 HITS.pool.root.1
[2025-12-13 07:22:45] -rw------- 1 boincer umatlas   2058240 Dec 13 07:22 result.tar.gz
07:22:46 (6283): run_atlas exited; CPU time 86647.141680
07:22:46 (6283): called boinc_finish(0)

</stderr_txt>
]]>

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