Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:21:20 (365285): wrapper (7.7.26015): starting
01:21:20 (365285): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 01:21:20] Arguments: --nthreads 12
[2025-12-13 01:21:20] Threads: 12
[2025-12-13 01:21:20] Checking for CVMFS
[2025-12-13 01:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 01:21:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 01:21:21] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 01:21:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 01:21:22] 2.11.5.0 1525032 17490 261696 153955 2 191 25327138 45568001 11557 130560 0 100766495 99.733 90897739 24779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-13 01:21:22] CVMFS is ok
[2025-12-13 01:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 01:21:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 01:21:22] Further information can be found at the LHC@home message board.
[2025-12-13 01:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 01:21:22] Checking for apptainer binary...
[2025-12-13 01:21:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 01:21:22] Running /usr/bin/apptainer --version
[2025-12-13 01:21:22] apptainer version 1.4.1-1.el9
[2025-12-13 01:21:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 01:21:24] wns0053.triumf.lcg
[2025-12-13 01:21:24] apptainer works
[2025-12-13 01:21:24] Set ATHENA_PROC_NUMBER=12
[2025-12-13 01:21:24] Set ATHENA_CORE_NUMBER=12
[2025-12-13 01:21:24] Starting ATLAS job with PandaID=6929158002
[2025-12-13 01:21:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 01:28:20]  *** The last 200 lines of the pilot log: ***
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | WARNING  | wrong length of table data, x=[1765617847.0], y=[1731.0] (must be same and length>=4)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . Timing measurements:
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . get job = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . initial setup = 5 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload setup = 34 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-in = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload execution = 64 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-out = 1 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . log creation = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:28:20] 2025-12-13 09:27:29,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929158002/pilotlog.txt
[2025-12-13 01:28:20] 2025-12-13 09:27:29,741 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 01:28:20] - Log from pilotlog.txt -
[2025-12-13 01:28:20] 2025-12-13 09:27:29,727 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929158002/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | INFO     | extracted standard info from prmon json
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | WARNING  | wrong length of table data, x=[1765617847.0], y=[1731.0] (must be same and length>=4)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . Timing measurements:
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . get job = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . initial setup = 5 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload setup = 34 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-in = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload execution = 64 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-out = 1 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . log creation = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:28:20] 2025-12-13 09:27:29,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929158002/pilotlog.txt
[2025-12-13 01:28:20] 2025-12-13 09:27:29,742 | WARNING  | 
[2025-12-13 01:28:20] [begin log extracts]
[2025-12-13 01:28:20] - Log from pilotlog.txt -
[2025-12-13 01:28:20] 2025-12-13 09:27:29,727 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929158002/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | INFO     | extracted standard info from prmon json
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 01:28:20] 2025-12-13 09:27:29,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | WARNING  | wrong length of table data, x=[1765617847.0], y=[1731.0] (must be same and length>=4)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | could have reported an average CPU frequency of 2501 MHz (4 samples)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . Timing measurements:
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . get job = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . initial setup = 5 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload setup = 34 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-in = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . payload execution = 64 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . stage-out = 1 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | . log creation = 0 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | ..............................
[2025-12-13 01:28:20] 2025-12-13 09:27:29,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 01:28:20] 2025-12-13 09:27:29,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929158002/pilotlog.txt
[2025-12-13 01:28:20] [end log extracts]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,742 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,743 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 01:28:20] 2025-12-13 09:27:29,794 | INFO     | 
[2025-12-13 01:28:20] 2025-12-13 09:27:29,794 | INFO     | job summary report
[2025-12-13 01:28:20] 2025-12-13 09:27:29,794 | INFO     | --------------------------------------------------
[2025-12-13 01:28:20] 2025-12-13 09:27:29,794 | INFO     | PanDA job id: 6929158002
[2025-12-13 01:28:20] 2025-12-13 09:27:29,794 | INFO     | task id: 47898763
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 01:24:46,043 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | pilot state: failed 
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | transexitcode: 65
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | exeerrorcode: 65
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | exitcode: 65
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | cpuconsumptiontime: 17 s
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | nevents: 0
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | neventsw: 0
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | pid: 376239
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | pgrp: 376239
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | corecount: 12
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | event service: False
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | sizes: {0: 2283713, 1: 2283968, 2: 2283968, 13: 2283996, 24: 2284052, 27: 2284342, 35: 2284498, 102: 2307767, 103: 2307743, 104: 2312063, 107: 2312091, 255: 231253
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | --------------------------------------------------
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | 
[2025-12-13 01:28:20] 2025-12-13 09:27:29,795 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 01:28:20] 2025-12-13 09:27:29,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | job 6929158002 has completed (purged errors)
[2025-12-13 01:28:20] 2025-12-13 09:27:29,810 | INFO     | overall cleanup function is called
[2025-12-13 01:28:20] 2025-12-13 09:27:30,820 | INFO     | --- collectZombieJob: --- 10, [376239]
[2025-12-13 01:28:20] 2025-12-13 09:27:30,820 | INFO     | zombie collector waiting for pid 376239
[2025-12-13 01:28:20] 2025-12-13 09:27:30,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 01:28:20] 2025-12-13 09:27:30,820 | INFO     | collected zombie processes
[2025-12-13 01:28:20] 2025-12-13 09:27:30,820 | INFO     | will attempt to kill all subprocesses of pid=376239
[2025-12-13 01:28:20] 2025-12-13 09:27:31,796 | INFO     | process IDs to be killed: [376239] (in reverse order)
[2025-12-13 01:28:20] 2025-12-13 09:27:32,218 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 01:28:20] 2025-12-13 09:27:32,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 01:28:20] 2025-12-13 09:27:32,246 | INFO     | did not find any defunct processes belonging to 376239
[2025-12-13 01:28:20] 2025-12-13 09:27:32,269 | INFO     | did not find any defunct processes belonging to 376239
[2025-12-13 01:28:20] 2025-12-13 09:27:32,269 | INFO     | ready for new job
[2025-12-13 01:28:20] 2025-12-13 09:27:32,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 01:28:20] 2025-12-13 09:27:32,281 | INFO     | ***************************************
[2025-12-13 01:28:20] 2025-12-13 09:27:32,281 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 01:28:20] 2025-12-13 09:27:32,281 | INFO     | ***************************************
[2025-12-13 01:28:20] 2025-12-13 09:27:32,281 | INFO     | 
[2025-12-13 01:28:20] 2025-12-13 09:27:32,283 | INFO     | architecture information:
[2025-12-13 01:28:20] 2025-12-13 09:27:32,284 | INFO     | executing command: cat /etc/os-release
[2025-12-13 01:28:20] 2025-12-13 09:27:32,360 | INFO     | cat /etc/os-release:
[2025-12-13 01:28:20] NAME="CentOS Linux"
[2025-12-13 01:28:20] VERSION="7 (Core)"
[2025-12-13 01:28:20] ID="centos"
[2025-12-13 01:28:20] ID_LIKE="rhel fedora"
[2025-12-13 01:28:20] VERSION_ID="7"
[2025-12-13 01:28:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 01:28:20] ANSI_COLOR="0;31"
[2025-12-13 01:28:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 01:28:20] HOME_URL="https://www.centos.org/"
[2025-12-13 01:28:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 01:28:20] 
[2025-12-13 01:28:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 01:28:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 01:28:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 01:28:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 01:28:20] 
[2025-12-13 01:28:20] 2025-12-13 09:27:32,360 | INFO     | ***************************************
[2025-12-13 01:28:20] 2025-12-13 09:27:32,865 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 01:28:20] 2025-12-13 09:27:32,985 | INFO     | sufficient remaining disk space (2152455995392 B)
[2025-12-13 01:28:20] 2025-12-13 09:27:32,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 01:28:20] 2025-12-13 09:27:32,986 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 01:28:20] 2025-12-13 09:27:32,986 | INFO     | update_server=False
[2025-12-13 01:28:20] 2025-12-13 09:27:32,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 01:28:20] 2025-12-13 09:27:32,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:28:20] 2025-12-13 09:27:32,987 | INFO     | aborting loop
[2025-12-13 01:28:20] 2025-12-13 09:27:32,988 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 01:28:20] 2025-12-13 09:27:33,025 | INFO     | all job control threads have been joined
[2025-12-13 01:28:20] 2025-12-13 09:27:33,092 | INFO     | all payload control threads have been joined
[2025-12-13 01:28:20] 2025-12-13 09:27:33,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 01:28:20] 2025-12-13 09:27:33,692 | INFO     | all data control threads have been joined
[2025-12-13 01:28:20] 2025-12-13 09:27:33,992 | INFO     | [job] retrieve thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:33,992 | INFO     | [job] job monitor thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,040 | INFO     | [job] control thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,098 | INFO     | [payload] control thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,313 | INFO     | [payload] validate_post thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,661 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,689 | INFO     | [job] validate thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,698 | INFO     | [data] control thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:28:20] 2025-12-13 09:27:34,926 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:34,949 | INFO     | [payload] failed_post thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:35,029 | INFO     | [data] copytool_in thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:35,112 | INFO     | [data] copytool_out thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:35,416 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:35,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:35,829 | INFO     | [job] queue monitor thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:27:37,008 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 01:28:20] 2025-12-13 09:28:02,329 | INFO     | PID=369192 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 01:28:20] 2025-12-13 09:28:02,329 | INFO     | .. there are 42 such processes running
[2025-12-13 01:28:20] 2025-12-13 09:28:02,329 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 01:28:20] 2025-12-13 09:28:02,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 01:28:20] 2025-12-13 09:28:02,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 01:28:20] 2025-12-13 09:28:12,770 | INFO     | [monitor] cgroup control has ended
[2025-12-13 01:28:20] 2025-12-13 09:28:13,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185410381632)>', '<ExcThread(monitor, started 140184502920960)>']
[2025-12-13 01:28:20] 2025-12-13 09:28:13,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 01:28:20] 2025-12-13 09:28:13,395 | INFO     | [monitor] control thread has ended
[2025-12-13 01:28:20] 2025-12-13 09:28:18,113 | INFO     | all workflow threads have been joined
[2025-12-13 01:28:20] 2025-12-13 09:28:18,113 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 01:28:20] 2025-12-13 09:28:18,113 | INFO     | traces error code: 0
[2025-12-13 01:28:20] 2025-12-13 09:28:18,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 01:28:20] 2025-12-13 09:28:18,331 [wrapper] ==== pilot stdout END ====
[2025-12-13 01:28:20] 2025-12-13 09:28:18,369 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 01:28:20] 2025-12-13 09:28:18,383 [wrapper] pilotpid: 369192
[2025-12-13 01:28:20] 2025-12-13 09:28:18,407 [wrapper] Pilot exit status: 0
[2025-12-13 01:28:20] 2025-12-13 09:28:18,584 [wrapper] pandaids: 6929158002
[2025-12-13 01:28:20] 2025-12-13 09:28:18,989 [wrapper] cleanup supervisor_pilot  369198 369193
[2025-12-13 01:28:20] 2025-12-13 09:28:19,027 [wrapper] Test setup, not cleaning
[2025-12-13 01:28:20] 2025-12-13 09:28:19,033 [wrapper] apfmon messages muted
[2025-12-13 01:28:20] 2025-12-13 09:28:19,049 [wrapper] ==== wrapper stdout END ====
[2025-12-13 01:28:20] 2025-12-13 09:28:19,064 [wrapper] ==== wrapper stderr END ====
[2025-12-13 01:28:20]  *** Error codes and diagnostics ***
[2025-12-13 01:28:20]     "exeErrorCode": 65,
[2025-12-13 01:28:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 01:28:20]     "pilotErrorCode": 1305,
[2025-12-13 01:28:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 01:28:20]  *** Listing of results directory ***
[2025-12-13 01:28:20] total 222448
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc    579449 Dec 12 23:20 pilot3.tar.gz
[2025-12-13 01:28:20] -rwx------. 1 boinc boinc     36322 Dec 12 23:29 runpilot2-wrapper.sh
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc      5112 Dec 12 23:29 queuedata.json
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc       100 Dec 13 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 01:28:20] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 01:21 run_atlas
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc       105 Dec 13 01:21 job.xml
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc      6595 Dec 13 01:21 init_data.xml
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc 223625598 Dec 13 01:21 EVNT.47898761._000007.pool.root.1
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:21 start_atlas.sh
[2025-12-13 01:28:20] drwxrwx--x. 2 boinc boinc      4096 Dec 13 01:21 shared
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc    592385 Dec 13 01:21 input.tar.gz
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc         0 Dec 13 01:21 boinc_lockfile
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc      2499 Dec 13 01:21 pandaJob.out
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc    991736 Dec 13 01:22 agis_schedconf.cvmfs.json
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc   1516240 Dec 13 01:22 agis_ddmendpoints.agis.ALL.json
[2025-12-13 01:28:20] drwx------. 5 boinc boinc      4096 Dec 13 01:22 pilot3
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc       523 Dec 13 01:24 boinc_task_state.xml
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc       945 Dec 13 01:24 memory_monitor_summary.json
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc     22195 Dec 13 01:24 log.47898763._000167.job.log.tgz.1
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc        95 Dec 13 01:27 pilot_heartbeat.json
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc      8396 Dec 13 01:27 heartbeat.json
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc      8192 Dec 13 01:27 boinc_mmap_file
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc        22 Dec 13 01:27 wrapper_checkpoint.txt
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc      4822 Dec 13 01:28 pilotlog.txt
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc     98173 Dec 13 01:28 log.47898763._000167.job.log.1
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc       188 Dec 13 01:28 output.list
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc       620 Dec 13 01:28 runtime_log
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc    143360 Dec 13 01:28 result.tar.gz
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc      8636 Dec 13 01:28 runtime_log.err
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc       645 Dec 13 01:28 R15NDmlFZo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmG8NKDmJ5ODvm.diag
[2025-12-13 01:28:20] -rw-r--r--. 1 boinc boinc     21834 Dec 13 01:28 stderr.txt
[2025-12-13 01:28:20] No HITS result produced
[2025-12-13 01:28:20]  *** Contents of shared directory: ***
[2025-12-13 01:28:20] total 219128
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc 223625598 Dec 13 01:21 ATLAS.root_0
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:21 start_atlas.sh
[2025-12-13 01:28:20] -rw-r--r--. 2 boinc boinc    592385 Dec 13 01:21 input.tar.gz
[2025-12-13 01:28:20] -rw-------. 1 boinc boinc    143360 Dec 13 01:28 result.tar.gz
01:28:22 (365285): run_atlas exited; CPU time 30.305110
01:28:22 (365285): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN