Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:38:15 (1632793): wrapper (7.7.26015): starting
00:38:15 (1632793): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 00:38:15] Arguments: --nthreads 8
[2025-12-13 00:38:15] Threads: 8
[2025-12-13 00:38:15] Checking for CVMFS
[2025-12-13 00:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 00:38:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 00:38:15] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 00:38:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 00:38:16] 2.11.3.0 733561 52636 224376 153954 1 194 23601790 45568000 9711 130560 0 293410752 99.793 191110828 21474 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-12-13 00:38:16] CVMFS is ok
[2025-12-13 00:38:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 00:38:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 00:38:16] Further information can be found at the LHC@home message board.
[2025-12-13 00:38:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 00:38:16] Checking for apptainer binary...
[2025-12-13 00:38:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 00:38:16] Running /usr/bin/apptainer --version
[2025-12-13 00:38:16] apptainer version 1.4.1-1.el9
[2025-12-13 00:38:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 00:38:16] wns0024.triumf.lcg
[2025-12-13 00:38:16] apptainer works
[2025-12-13 00:38:16] Set ATHENA_PROC_NUMBER=8
[2025-12-13 00:38:16] Set ATHENA_CORE_NUMBER=8
[2025-12-13 00:38:16] Starting ATLAS job with PandaID=6929041525
[2025-12-13 00:38:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 00:49:52]  *** The last 200 lines of the pilot log: ***
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | wrong length of table data, x=[1765615408.0, 1765615469.0, 1765615530.0], y=[2315.0, 190086.0, 335864.0] (must be same and length>=4)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . Timing measurements:
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . get job = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . initial setup = 10 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload setup = 31 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-in = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload execution = 202 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-out = 3 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . log creation = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 00:49:52] 2025-12-13 08:49:01,236 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929041525/pilotlog.txt
[2025-12-13 00:49:52] 2025-12-13 08:49:01,383 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-13 00:49:52] - Log from pilotlog.txt -
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929041525/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | extracted standard info from prmon json
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | wrong length of table data, x=[1765615408.0, 1765615469.0, 1765615530.0], y=[2315.0, 190086.0, 335864.0] (must be same and length>=4)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . Timing measurements:
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . get job = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . initial setup = 10 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload setup = 31 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-in = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload execution = 202 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-out = 3 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . log creation = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 00:49:52] 2025-12-13 08:49:01,236 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929041525/pilotlog.txt
[2025-12-13 00:49:52] 2025-12-13 08:49:01,383 | WARNING  | 
[2025-12-13 00:49:52] [begin log extracts]
[2025-12-13 00:49:52] - Log from pilotlog.txt -
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929041525/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | extracted standard info from prmon json
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 00:49:52] 2025-12-13 08:49:01,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | WARNING  | wrong length of table data, x=[1765615408.0, 1765615469.0, 1765615530.0], y=[2315.0, 190086.0, 335864.0] (must be same and length>=4)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,234 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . Timing measurements:
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . get job = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . initial setup = 10 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload setup = 31 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-in = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . payload execution = 202 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . stage-out = 3 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | . log creation = 0 s
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | ..............................
[2025-12-13 00:49:52] 2025-12-13 08:49:01,235 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-13 00:49:52] 2025-12-13 08:49:01,236 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929041525/pilotlog.txt
[2025-12-13 00:49:52] [end log extracts]
[2025-12-13 00:49:52] 2025-12-13 08:49:01,384 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-13 00:49:52] 2025-12-13 08:49:01,384 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-13 00:49:52] 2025-12-13 08:49:02,061 | INFO     | 
[2025-12-13 00:49:52] 2025-12-13 08:49:02,062 | INFO     | job summary report
[2025-12-13 00:49:52] 2025-12-13 08:49:02,062 | INFO     | --------------------------------------------------
[2025-12-13 00:49:52] 2025-12-13 08:49:02,062 | INFO     | PanDA job id: 6929041525
[2025-12-13 00:49:52] 2025-12-13 08:49:02,062 | INFO     | task id: 47886831
[2025-12-13 00:49:52] 2025-12-13 08:49:02,063 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-13 00:45:32,209 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-13 00:49:52] 2025-12-13 08:49:02,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 00:49:52] 2025-12-13 08:49:02,091 | INFO     | pilot state: failed 
[2025-12-13 00:49:52] 2025-12-13 08:49:02,091 | INFO     | transexitcode: 65
[2025-12-13 00:49:52] 2025-12-13 08:49:02,091 | INFO     | exeerrorcode: 65
[2025-12-13 00:49:52] 2025-12-13 08:49:02,091 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | exitcode: 65
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | cpuconsumptiontime: 19 s
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | nevents: 0
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | neventsw: 0
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | pid: 1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | pgrp: 1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | corecount: 8
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | event service: False
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | sizes: {0: 2283161, 1: 2283759, 2: 2283843, 3: 2283871, 4: 2283899, 5: 2284098, 6: 2284282, 18: 2284310, 29: 2284338, 40: 2284366, 51: 2284394, 63: 2284702, 74: 22
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | --------------------------------------------------
[2025-12-13 00:49:52] 2025-12-13 08:49:02,092 | INFO     | 
[2025-12-13 00:49:52] 2025-12-13 08:49:02,093 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-13 00:49:52] 2025-12-13 08:49:02,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | job 6929041525 has completed (purged errors)
[2025-12-13 00:49:52] 2025-12-13 08:49:02,211 | INFO     | overall cleanup function is called
[2025-12-13 00:49:52] 2025-12-13 08:49:03,222 | INFO     | --- collectZombieJob: --- 10, [1644389]
[2025-12-13 00:49:52] 2025-12-13 08:49:03,222 | INFO     | zombie collector waiting for pid 1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:03,222 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 00:49:52] 2025-12-13 08:49:03,222 | INFO     | collected zombie processes
[2025-12-13 00:49:52] 2025-12-13 08:49:03,222 | INFO     | will attempt to kill all subprocesses of pid=1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:06,354 | INFO     | PID=1636699 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 00:49:52] 2025-12-13 08:49:06,355 | INFO     | .. there are 33 such processes running
[2025-12-13 00:49:52] 2025-12-13 08:49:06,584 | INFO     | process IDs to be killed: [1644389] (in reverse order)
[2025-12-13 00:49:52] 2025-12-13 08:49:06,972 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 00:49:52] 2025-12-13 08:49:06,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 00:49:52] 2025-12-13 08:49:06,988 | INFO     | did not find any defunct processes belonging to 1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:06,997 | INFO     | did not find any defunct processes belonging to 1644389
[2025-12-13 00:49:52] 2025-12-13 08:49:06,997 | INFO     | ready for new job
[2025-12-13 00:49:52] 2025-12-13 08:49:06,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 00:49:52] 2025-12-13 08:49:07,003 | INFO     | ***************************************
[2025-12-13 00:49:52] 2025-12-13 08:49:07,003 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 00:49:52] 2025-12-13 08:49:07,003 | INFO     | ***************************************
[2025-12-13 00:49:52] 2025-12-13 08:49:07,003 | INFO     | 
[2025-12-13 00:49:52] 2025-12-13 08:49:07,005 | INFO     | architecture information:
[2025-12-13 00:49:52] 2025-12-13 08:49:07,009 | INFO     | executing command: cat /etc/os-release
[2025-12-13 00:49:52] 2025-12-13 08:49:07,040 | INFO     | cat /etc/os-release:
[2025-12-13 00:49:52] NAME="CentOS Linux"
[2025-12-13 00:49:52] VERSION="7 (Core)"
[2025-12-13 00:49:52] ID="centos"
[2025-12-13 00:49:52] ID_LIKE="rhel fedora"
[2025-12-13 00:49:52] VERSION_ID="7"
[2025-12-13 00:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 00:49:52] ANSI_COLOR="0;31"
[2025-12-13 00:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 00:49:52] HOME_URL="https://www.centos.org/"
[2025-12-13 00:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 00:49:52] 
[2025-12-13 00:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 00:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 00:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 00:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 00:49:52] 
[2025-12-13 00:49:52] 2025-12-13 08:49:07,040 | INFO     | ***************************************
[2025-12-13 00:49:52] 2025-12-13 08:49:07,544 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-13 00:49:52] 2025-12-13 08:49:07,741 | INFO     | sufficient remaining disk space (1436604694528 B)
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | INFO     | update_server=False
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 00:49:52] 2025-12-13 08:49:07,742 | INFO     | aborting loop
[2025-12-13 00:49:52] 2025-12-13 08:49:07,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 00:49:52] 2025-12-13 08:49:07,876 | INFO     | all job control threads have been joined
[2025-12-13 00:49:52] 2025-12-13 08:49:08,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 00:49:52] 2025-12-13 08:49:08,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 00:49:52] 2025-12-13 08:49:08,748 | INFO     | [job] retrieve thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:08,749 | INFO     | [job] job monitor thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:08,750 | INFO     | [job] queue monitor thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:08,799 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:08,806 | INFO     | [payload] validate_post thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:08,825 | INFO     | all data control threads have been joined
[2025-12-13 00:49:52] 2025-12-13 08:49:08,899 | INFO     | [job] control thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,161 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,215 | INFO     | all payload control threads have been joined
[2025-12-13 00:49:52] 2025-12-13 08:49:09,280 | INFO     | [payload] failed_post thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,828 | INFO     | [data] copytool_in thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,839 | INFO     | [data] control thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,849 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:09,861 | INFO     | [job] validate thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:10,221 | INFO     | [payload] control thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:10,745 | INFO     | [data] copytool_out thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:12,399 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 00:49:52] 2025-12-13 08:49:40,184 | INFO     | PID=1636699 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 00:49:52] 2025-12-13 08:49:40,184 | INFO     | .. there are 33 such processes running
[2025-12-13 00:49:52] 2025-12-13 08:49:40,185 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 00:49:52] 2025-12-13 08:49:40,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 00:49:52] 2025-12-13 08:49:40,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 00:49:52] 2025-12-13 08:49:44,313 | INFO     | [monitor] cgroup control has ended
[2025-12-13 00:49:52] 2025-12-13 08:49:44,824 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879075735360)>', '<ExcThread(monitor, started 139878067062528)>']
[2025-12-13 00:49:52] 2025-12-13 08:49:45,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 00:49:52] 2025-12-13 08:49:45,214 | INFO     | [monitor] control thread has ended
[2025-12-13 00:49:52] 2025-12-13 08:49:49,850 | INFO     | all workflow threads have been joined
[2025-12-13 00:49:52] 2025-12-13 08:49:49,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 00:49:52] 2025-12-13 08:49:49,851 | INFO     | traces error code: 0
[2025-12-13 00:49:52] 2025-12-13 08:49:49,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 00:49:52] 2025-12-13 08:49:50,736 [wrapper] ==== pilot stdout END ====
[2025-12-13 00:49:52] 2025-12-13 08:49:50,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 00:49:52] 2025-12-13 08:49:50,745 [wrapper] pilotpid: 1636699
[2025-12-13 00:49:52] 2025-12-13 08:49:50,746 [wrapper] Pilot exit status: 0
[2025-12-13 00:49:52] 2025-12-13 08:49:50,946 [wrapper] pandaids: 6929041525
[2025-12-13 00:49:52] 2025-12-13 08:49:51,410 [wrapper] cleanup supervisor_pilot 1636705 1636700
[2025-12-13 00:49:52] 2025-12-13 08:49:51,456 [wrapper] Test setup, not cleaning
[2025-12-13 00:49:52] 2025-12-13 08:49:51,503 [wrapper] apfmon messages muted
[2025-12-13 00:49:52] 2025-12-13 08:49:51,537 [wrapper] ==== wrapper stdout END ====
[2025-12-13 00:49:52] 2025-12-13 08:49:51,569 [wrapper] ==== wrapper stderr END ====
[2025-12-13 00:49:52]  *** Error codes and diagnostics ***
[2025-12-13 00:49:52]     "exeErrorCode": 65,
[2025-12-13 00:49:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 00:49:52]     "pilotErrorCode": 1305,
[2025-12-13 00:49:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-13 00:49:52]  *** Listing of results directory ***
[2025-12-13 00:49:52] total 193068
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc    579449 Dec 12 22:26 pilot3.tar.gz
[2025-12-13 00:49:52] -rwx------. 1 boinc boinc     36322 Dec 12 22:51 runpilot2-wrapper.sh
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc      5112 Dec 12 22:51 queuedata.json
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc       100 Dec 13 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 00:49:52] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 00:38 run_atlas
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc       105 Dec 13 00:38 job.xml
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc      6446 Dec 13 00:38 init_data.xml
[2025-12-13 00:49:52] -rw-r--r--. 2 boinc boinc 193502969 Dec 13 00:38 EVNT.47886829._000145.pool.root.1
[2025-12-13 00:49:52] -rw-r--r--. 2 boinc boinc     15847 Dec 13 00:38 start_atlas.sh
[2025-12-13 00:49:52] drwxrwx--x. 2 boinc boinc      4096 Dec 13 00:38 shared
[2025-12-13 00:49:52] -rw-r--r--. 2 boinc boinc    592416 Dec 13 00:38 input.tar.gz
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc         0 Dec 13 00:38 boinc_lockfile
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc      2537 Dec 13 00:38 pandaJob.out
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc    991736 Dec 13 00:39 agis_schedconf.cvmfs.json
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc   1516240 Dec 13 00:39 agis_ddmendpoints.agis.ALL.json
[2025-12-13 00:49:52] drwx------. 5 boinc boinc      4096 Dec 13 00:39 pilot3
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc       524 Dec 13 00:45 boinc_task_state.xml
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc       984 Dec 13 00:45 memory_monitor_summary.json
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc     24160 Dec 13 00:45 log.47886831._003571.job.log.tgz.1
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc      8427 Dec 13 00:49 heartbeat.json
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc      8192 Dec 13 00:49 boinc_mmap_file
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc        23 Dec 13 00:49 wrapper_checkpoint.txt
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc        95 Dec 13 00:49 pilot_heartbeat.json
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc      4823 Dec 13 00:49 pilotlog.txt
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc    119238 Dec 13 00:49 log.47886831._003571.job.log.1
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc       188 Dec 13 00:49 output.list
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc       620 Dec 13 00:49 runtime_log
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc    163840 Dec 13 00:49 result.tar.gz
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc      8634 Dec 13 00:49 runtime_log.err
[2025-12-13 00:49:52] -rw-------. 1 boinc boinc       644 Dec 13 00:49 mutMDmLeYo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk6NKDmgwewFn.diag
[2025-12-13 00:49:52] -rw-r--r--. 1 boinc boinc     22109 Dec 13 00:49 stderr.txt
[2025-12-13 00:49:53] No HITS result produced
[2025-12-13 00:49:53]  *** Contents of shared directory: ***
[2025-12-13 00:49:53] total 189724
[2025-12-13 00:49:53] -rw-r--r--. 2 boinc boinc 193502969 Dec 13 00:38 ATLAS.root_0
[2025-12-13 00:49:53] -rw-r--r--. 2 boinc boinc     15847 Dec 13 00:38 start_atlas.sh
[2025-12-13 00:49:53] -rw-r--r--. 2 boinc boinc    592416 Dec 13 00:38 input.tar.gz
[2025-12-13 00:49:53] -rw-------. 1 boinc boinc    163840 Dec 13 00:49 result.tar.gz
00:49:54 (1632793): run_atlas exited; CPU time 42.338135
00:49:54 (1632793): called boinc_finish(0)

</stderr_txt>
]]>

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