Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:30:31 (4040499): wrapper (7.7.26015): starting
06:30:31 (4040499): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 06:30:31] Arguments: --nthreads 4
[2025-12-14 06:30:31] Threads: 4
[2025-12-14 06:30:31] Checking for CVMFS
[2025-12-14 06:30:31] No cvmfs_config command found, will try listing directly
[2025-12-14 06:30:31] CVMFS is ok
[2025-12-14 06:30:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 06:30:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 06:30:31] Further information can be found at the LHC@home message board.
[2025-12-14 06:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 06:30:31] Checking for apptainer binary...
[2025-12-14 06:30:31] which: no apptainer in ((null))
[2025-12-14 06:30:31] apptainer is not installed, using version from CVMFS
[2025-12-14 06:30:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 06:30:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-12-14 06:30:32] apptainer works
[2025-12-14 06:30:32] Set ATHENA_PROC_NUMBER=4
[2025-12-14 06:30:32] Set ATHENA_CORE_NUMBER=4
[2025-12-14 06:30:32] Starting ATLAS job with PandaID=6929038039
[2025-12-14 06:30:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 10:26:51]  *** The last 200 lines of the pilot log: ***
[2025-12-14 10:26:51] 2025-12-14 08:38:22,699 | INFO     | time since job start (11255s) is within the limit (174528.0s)
[2025-12-14 10:26:51] 2025-12-14 08:38:23,548 | INFO     | monitor loop #751: job 0:6929038039 is in state 'finished'
[2025-12-14 10:26:51] 2025-12-14 08:38:23,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 10:26:51] 2025-12-14 08:38:24,705 | INFO     | time since job start (11257s) is within the limit (174528.0s)
[2025-12-14 10:26:51] 2025-12-14 08:38:26,052 | INFO     | monitor loop #752: job 0:6929038039 is in state 'finished'
[2025-12-14 10:26:51] 2025-12-14 08:38:26,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 10:26:51] 2025-12-14 08:38:26,710 | INFO     | time since job start (11259s) is within the limit (174528.0s)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,764 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 10:26:51] 2025-12-14 08:38:27,786 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2624.9807812500003
[2025-12-14 10:26:51] 2025-12-14 08:38:27,812 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-6929038039/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,813 | INFO     | extracted standard info from prmon json
[2025-12-14 10:26:51] 2025-12-14 08:38:27,813 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 10:26:51] 2025-12-14 08:38:27,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 10:26:51] 2025-12-14 08:38:27,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 10:26:51] 2025-12-14 08:38:27,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 10:26:51] 2025-12-14 08:38:27,818 | INFO     | fitting pss+swap vs Time
[2025-12-14 10:26:51] 2025-12-14 08:38:27,818 | INFO     | sum of square deviations: 1931608310.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,819 | INFO     | sum of deviations: -43457932777.50001
[2025-12-14 10:26:51] 2025-12-14 08:38:27,819 | INFO     | mean x: 1765695869.5
[2025-12-14 10:26:51] 2025-12-14 08:38:27,820 | INFO     | mean y: 2386411.4836956523
[2025-12-14 10:26:51] 2025-12-14 08:38:27,820 | INFO     | intersect: 39727568791.88069
[2025-12-14 10:26:51] 2025-12-14 08:38:27,820 | INFO     | chi2: 1.6538838006206655
[2025-12-14 10:26:51] 2025-12-14 08:38:27,820 | INFO     | sum of square deviations: 1778377530.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | sum of deviations: -41786893318.000046
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | mean x: 1765695717.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | mean y: 2388074.9776536315
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | intersect: 41491294290.705986
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | chi2: 1.6459031597163025
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | current chi2=1.6459031597163025 (change=0.48253939613944197 %)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,822 | INFO     | right removable region: 178
[2025-12-14 10:26:51] 2025-12-14 08:38:27,823 | INFO     | sum of square deviations: 1778377530.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,824 | INFO     | sum of deviations: -62300479801.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,824 | INFO     | mean x: 1765696022.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,824 | INFO     | mean y: 2404798.5418994413
[2025-12-14 10:26:51] 2025-12-14 08:38:27,824 | INFO     | intersect: 61858623457.195915
[2025-12-14 10:26:51] 2025-12-14 08:38:27,825 | INFO     | chi2: 0.3942069223667011
[2025-12-14 10:26:51] 2025-12-14 08:38:27,825 | INFO     | current chi2=0.3942069223667011 (change=76.16477516626234 %)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,825 | INFO     | sum of square deviations: 1633472487.5
[2025-12-14 10:26:51] 2025-12-14 08:38:27,826 | INFO     | sum of deviations: -54479557683.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,826 | INFO     | mean x: 1765696174.5
[2025-12-14 10:26:51] 2025-12-14 08:38:27,826 | INFO     | mean y: 2396561.3448275863
[2025-12-14 10:26:51] 2025-12-14 08:38:27,826 | INFO     | intersect: 58891877299.73723
[2025-12-14 10:26:51] 2025-12-14 08:38:27,827 | INFO     | chi2: 0.3855028348309256
[2025-12-14 10:26:51] 2025-12-14 08:38:27,827 | INFO     | current chi2=0.3855028348309256 (change=2.2079996676665896 %)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,827 | INFO     | left removable region: 20
[2025-12-14 10:26:51] 2025-12-14 08:38:27,827 | INFO     | sum of square deviations: 1223016419.5
[2025-12-14 10:26:51] 2025-12-14 08:38:27,828 | INFO     | sum of deviations: -36497732524.0
[2025-12-14 10:26:51] 2025-12-14 08:38:27,828 | INFO     | mean x: 1765696296.5
[2025-12-14 10:26:51] 2025-12-14 08:38:27,828 | INFO     | mean y: 2379571.240506329
[2025-12-14 10:26:51] 2025-12-14 08:38:27,829 | INFO     | intersect: 52694976433.20308
[2025-12-14 10:26:51] 2025-12-14 08:38:27,829 | INFO     | chi2: 0.3380957103134565
[2025-12-14 10:26:51] 2025-12-14 08:38:27,829 | INFO     | current memory leak: -29.84 B/s (using 158 data points, chi2=0.34)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,829 | INFO     | could have reported an average CPU frequency of 2644 MHz (10 samples)
[2025-12-14 10:26:51] 2025-12-14 08:38:27,829 | INFO     | ..............................
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . Timing measurements:
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . get job = 0 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . initial setup = 1 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . payload setup = 10 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . stage-in = 0 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . payload execution = 11216 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . stage-out = 1 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | . log creation = 0 s
[2025-12-14 10:26:51] 2025-12-14 08:38:27,830 | INFO     | ..............................
[2025-12-14 10:26:51] 2025-12-14 08:38:28,262 | INFO     | 
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | job summary report
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | --------------------------------------------------
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | PanDA job id: 6929038039
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | task id: 47886933
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | errors: (none)
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | pilot state: finished 
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | transexitcode: 0
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | exeerrorcode: 0
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | exeerrordiag: 
[2025-12-14 10:26:51] 2025-12-14 08:38:28,263 | INFO     | exitcode: 0
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | exitmsg: OK
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | cpuconsumptiontime: 42486 s
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | nevents: 400
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | neventsw: 0
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | pid: 4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | pgrp: 4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | corecount: 4
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | event service: False
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | sizes: {0: 2283799, 1: 2283998, 9: 2284260, 12: 2284288, 11231: 2313834, 11233: 2322854, 11234: 2323038, 11241: 2323232}
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | --------------------------------------------------
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | 
[2025-12-14 10:26:51] 2025-12-14 08:38:28,264 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2025-12-14 10:26:51] 2025-12-14 08:38:28,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 10:26:51] 2025-12-14 08:38:28,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 10:26:51] 2025-12-14 08:38:28,297 | INFO     | job 6929038039 has completed (purged errors)
[2025-12-14 10:26:51] 2025-12-14 08:38:28,297 | INFO     | overall cleanup function is called
[2025-12-14 10:26:51] 2025-12-14 08:38:29,306 | INFO     | --- collectZombieJob: --- 10, [4051879]
[2025-12-14 10:26:51] 2025-12-14 08:38:29,306 | INFO     | zombie collector waiting for pid 4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:29,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 10:26:51] 2025-12-14 08:38:29,306 | INFO     | collected zombie processes
[2025-12-14 10:26:51] 2025-12-14 08:38:29,306 | INFO     | will attempt to kill all subprocesses of pid=4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:30,132 | INFO     | process IDs to be killed: [4051879] (in reverse order)
[2025-12-14 10:26:51] 2025-12-14 08:38:30,400 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 10:26:51] 2025-12-14 08:38:30,400 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 10:26:51] 2025-12-14 08:38:30,435 | INFO     | did not find any defunct processes belonging to 4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:30,466 | INFO     | did not find any defunct processes belonging to 4051879
[2025-12-14 10:26:51] 2025-12-14 08:38:30,466 | INFO     | ready for new job
[2025-12-14 10:26:51] 2025-12-14 08:38:30,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 10:26:51] 2025-12-14 08:38:30,469 | INFO     | ***************************************
[2025-12-14 10:26:51] 2025-12-14 08:38:30,469 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 10:26:51] 2025-12-14 08:38:30,469 | INFO     | ***************************************
[2025-12-14 10:26:51] 2025-12-14 08:38:30,469 | INFO     | 
[2025-12-14 10:26:51] 2025-12-14 08:38:30,478 | INFO     | architecture information:
[2025-12-14 10:26:51] 2025-12-14 08:38:30,478 | INFO     | executing command: cat /etc/os-release
[2025-12-14 10:26:51] 2025-12-14 08:38:30,500 | INFO     | cat /etc/os-release:
[2025-12-14 10:26:51] NAME="CentOS Linux"
[2025-12-14 10:26:51] VERSION="7 (Core)"
[2025-12-14 10:26:51] ID="centos"
[2025-12-14 10:26:51] ID_LIKE="rhel fedora"
[2025-12-14 10:26:51] VERSION_ID="7"
[2025-12-14 10:26:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 10:26:51] ANSI_COLOR="0;31"
[2025-12-14 10:26:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 10:26:51] HOME_URL="https://www.centos.org/"
[2025-12-14 10:26:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 10:26:51] 
[2025-12-14 10:26:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 10:26:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 10:26:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 10:26:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 10:26:51] 
[2025-12-14 10:26:51] 2025-12-14 08:38:30,500 | INFO     | ***************************************
[2025-12-14 10:26:51] 2025-12-14 08:38:31,003 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2025-12-14 10:26:51] 2025-12-14 08:38:31,028 | INFO     | sufficient remaining disk space (3217523998720 B)
[2025-12-14 10:26:51] 2025-12-14 08:38:31,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 10:26:51] 2025-12-14 08:38:31,028 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 10:26:51] 2025-12-14 08:38:31,028 | INFO     | update_server=False
[2025-12-14 10:26:51] 2025-12-14 08:38:31,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 10:26:51] 2025-12-14 08:38:31,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 10:26:51] 2025-12-14 08:38:31,062 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 10:26:51] 2025-12-14 08:38:31,062 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 10:26:51] 2025-12-14 08:38:31,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:26:51] 2025-12-14 08:38:31,062 | INFO     | will abort loop
[2025-12-14 10:26:51] 2025-12-14 08:38:31,131 | INFO     | all job control threads have been joined
[2025-12-14 10:26:51] 2025-12-14 08:38:31,231 | INFO     | all data control threads have been joined
[2025-12-14 10:26:51] 2025-12-14 08:38:31,332 | INFO     | all payload control threads have been joined
[2025-12-14 10:26:51] 2025-12-14 08:38:31,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 10:26:51] 2025-12-14 08:38:32,033 | INFO     | [job] retrieve thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,067 | INFO     | [job] job monitor thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,136 | INFO     | [job] control thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,236 | INFO     | [data] control thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,282 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,337 | INFO     | [payload] control thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,363 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,500 | INFO     | [job] validate thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,533 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,599 | INFO     | [data] copytool_in thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:32,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 10:26:51] 2025-12-14 08:38:33,034 | INFO     | [data] copytool_out thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:33,404 | INFO     | [payload] failed_post thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:33,542 | INFO     | [payload] validate_post thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:33,947 | INFO     | [job] queue monitor thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:38:35,602 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 10:26:51] 2025-12-14 08:39:00,738 | INFO     | PID=4044478 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 10:26:51] 2025-12-14 08:39:00,739 | INFO     | .. there are 9 such processes running
[2025-12-14 10:26:51] 2025-12-14 08:39:00,739 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 10:26:51] 2025-12-14 08:39:00,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 10:26:51] 2025-12-14 08:39:00,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 10:26:51] 2025-12-14 08:39:06,157 | INFO     | [monitor] cgroup control has ended
[2025-12-14 10:26:51] 2025-12-14 08:39:08,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22532990785344)>', '<ExcThread(monitor, started 22532755265280)>']
[2025-12-14 10:26:51] 2025-12-14 08:39:08,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 10:26:51] 2025-12-14 08:39:08,779 | INFO     | [monitor] control thread has ended
[2025-12-14 10:26:51] 2025-12-14 08:39:13,191 | INFO     | all workflow threads have been joined
[2025-12-14 10:26:51] 2025-12-14 08:39:13,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 10:26:51] 2025-12-14 08:39:13,191 | INFO     | traces error code: 0
[2025-12-14 10:26:51] 2025-12-14 08:39:13,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 10:26:51] 2025-12-14 08:39:13,398 [wrapper] ==== pilot stdout END ====
[2025-12-14 10:26:51] 2025-12-14 08:39:13,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 10:26:51] 2025-12-14 08:39:13,410 [wrapper] pilotpid: 4044478
[2025-12-14 10:26:51] 2025-12-14 08:39:13,414 [wrapper] Pilot exit status: 0
[2025-12-14 10:26:51] 2025-12-14 08:39:13,429 [wrapper] pandaids: 6929038039
[2025-12-14 10:26:51] 2025-12-14 08:39:13,605 [wrapper] cleanup supervisor_pilot  238037 4044479
[2025-12-14 10:26:51] 2025-12-14 08:39:13,610 [wrapper] Test setup, not cleaning
[2025-12-14 10:26:51] 2025-12-14 08:39:13,614 [wrapper] apfmon messages muted
[2025-12-14 10:26:51] 2025-12-14 08:39:13,619 [wrapper] ==== wrapper stdout END ====
[2025-12-14 10:26:51] 2025-12-14 08:39:13,623 [wrapper] ==== wrapper stderr END ====
[2025-12-14 10:26:51]  *** Error codes and diagnostics ***
[2025-12-14 10:26:51]     "exeErrorCode": 0,
[2025-12-14 10:26:51]     "exeErrorDiag": "",
[2025-12-14 10:26:51]     "pilotErrorCode": 0,
[2025-12-14 10:26:51]     "pilotErrorDiag": "",
[2025-12-14 10:26:51]  *** Listing of results directory ***
[2025-12-14 10:26:51] total 343292
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc    579449 Dec 13 07:26 pilot3.tar.gz
[2025-12-14 10:26:51] -rwx------ 1 boinc boinc     36322 Dec 13 07:48 runpilot2-wrapper.sh
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc      5112 Dec 13 07:49 queuedata.json
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc       100 Dec 14 06:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 10:26:51] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 06:30 run_atlas
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc       105 Dec 14 06:30 job.xml
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc      6690 Dec 14 06:30 init_data.xml
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc 193576538 Dec 14 06:30 EVNT.47886929._000032.pool.root.1
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc    592386 Dec 14 06:30 input.tar.gz
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc     15847 Dec 14 06:30 start_atlas.sh
[2025-12-14 10:26:51] drwxrwx--x 2 boinc boinc      4096 Dec 14 06:30 shared
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc         0 Dec 14 06:30 boinc_lockfile
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc      2510 Dec 14 06:30 pandaJob.out
[2025-12-14 10:26:51] -rw------- 1 boinc boinc    991736 Dec 14 06:30 agis_schedconf.cvmfs.json
[2025-12-14 10:26:51] drwx------ 5 boinc boinc      4096 Dec 14 06:30 pilot3
[2025-12-14 10:26:51] -rw------- 1 boinc boinc 150228731 Dec 14 09:37 HITS.47886933._000788.pool.root.1
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc       528 Dec 14 09:37 boinc_task_state.xml
[2025-12-14 10:26:51] -rw------- 1 boinc boinc        95 Dec 14 09:38 pilot_heartbeat.json
[2025-12-14 10:26:51] -rw------- 1 boinc boinc      1040 Dec 14 09:38 memory_monitor_summary.json
[2025-12-14 10:26:51] -rw------- 1 boinc boinc   1516240 Dec 14 09:38 agis_ddmendpoints.agis.ALL.json
[2025-12-14 10:26:51] -rw------- 1 boinc boinc    357511 Dec 14 09:38 log.47886933._000788.job.log.tgz.1
[2025-12-14 10:26:51] -rw------- 1 boinc boinc      7782 Dec 14 09:38 heartbeat.json
[2025-12-14 10:26:51] -rw------- 1 boinc boinc      5020 Dec 14 09:39 pilotlog.txt
[2025-12-14 10:26:51] -rw------- 1 boinc boinc   1547589 Dec 14 09:39 log.47886933._000788.job.log.1
[2025-12-14 10:26:51] -rw------- 1 boinc boinc       357 Dec 14 09:39 output.list
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc       620 Dec 14 09:39 runtime_log
[2025-12-14 10:26:51] -rw------- 1 boinc boinc   1925120 Dec 14 09:39 result.tar.gz
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc      9206 Dec 14 09:39 runtime_log.err
[2025-12-14 10:26:51] -rw------- 1 boinc boinc       666 Dec 14 09:39 NX4MDmubYo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGyNKDmK3qAVo.diag
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc        26 Dec 14 10:26 wrapper_checkpoint.txt
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc      8192 Dec 14 10:26 boinc_mmap_file
[2025-12-14 10:26:51] -rw-r--r-- 1 boinc boinc     21106 Dec 14 10:26 stderr.txt
[2025-12-14 10:26:51] HITS file was successfully produced:
[2025-12-14 10:26:51] -rw------- 1 boinc boinc 150228731 Dec 14 09:37 shared/HITS.pool.root.1
[2025-12-14 10:26:51]  *** Contents of shared directory: ***
[2025-12-14 10:26:51] total 338232
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc 193576538 Dec 14 06:30 ATLAS.root_0
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc    592386 Dec 14 06:30 input.tar.gz
[2025-12-14 10:26:51] -rw-r--r-- 2 boinc boinc     15847 Dec 14 06:30 start_atlas.sh
[2025-12-14 10:26:51] -rw------- 1 boinc boinc 150228731 Dec 14 09:37 HITS.pool.root.1
[2025-12-14 10:26:51] -rw------- 1 boinc boinc   1925120 Dec 14 09:39 result.tar.gz
10:26:52 (4040499): run_atlas exited; CPU time 43256.353024
10:26:52 (4040499): called boinc_finish(0)

</stderr_txt>
]]>

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