Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:54:43 (15575): wrapper (7.7.26015): starting
01:54:43 (15575): wrapper: running run_atlas (--nthreads 12)
[2025-12-13 01:54:43] Arguments: --nthreads 12
[2025-12-13 01:54:43] Threads: 12
[2025-12-13 01:54:43] Checking for CVMFS
[2025-12-13 01:54:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 01:54:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 01:54:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 01:54:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 01:54:43] 2.11.2.0 2914 311828 92616 153951 3 57 13755728 20275200 1 130560 1 137295141 99.962 18256470 14974 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 01:54:43] CVMFS is ok
[2025-12-13 01:54:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 01:54:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 01:54:43] Further information can be found at the LHC@home message board.
[2025-12-13 01:54:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 01:54:43] Checking for apptainer binary...
[2025-12-13 01:54:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 01:54:43] Running /usr/bin/apptainer --version
[2025-12-13 01:54:43] apptainer version 1.3.2-1.el7
[2025-12-13 01:54:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 01:54:45] c-205-5.aglt2.org
[2025-12-13 01:54:45] apptainer works
[2025-12-13 01:54:45] Set ATHENA_PROC_NUMBER=12
[2025-12-13 01:54:45] Set ATHENA_CORE_NUMBER=12
[2025-12-13 01:54:45] Starting ATLAS job with PandaID=6929038244
[2025-12-13 01:54:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 03:13:14]  *** The last 200 lines of the pilot log: ***
[2025-12-13 03:13:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-13 03:13:14]  replicas=None
[2025-12-13 03:13:14]  scope=mc23_13p6TeV
[2025-12-13 03:13:14]  status=None
[2025-12-13 03:13:14]  status_code=0
[2025-12-13 03:13:14]  storage_token=
[2025-12-13 03:13:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6929038244/log.47886933._000993.job.log.tgz.1
[2025-12-13 03:13:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/e5/log.47886933._000993.job.log.tgz.1
[2025-12-13 03:13:14]  workdir=None
[2025-12-13 03:13:14] ]
[2025-12-13 03:13:14] 2025-12-13 08:11:57,403 | INFO     | transferring file log.47886933._000993.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6929038244/log.47886933._000993.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-13 03:13:14] 2025-12-13 08:11:57,403 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6929038244/log.47886933._000993.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886933._000993.job
[2025-12-13 03:13:14] 2025-12-13 08:11:57,426 | INFO     | adding to output.list: log.47886933._000993.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/e5/log.47886933._000993.job.log.tg
[2025-12-13 03:13:14] 2025-12-13 08:11:57,427 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-13 03:13:14] 2025-12-13 08:11:57,428 | INFO     | summary of transferred files:
[2025-12-13 03:13:14] 2025-12-13 08:11:57,428 | INFO     |  -- lfn=log.47886933._000993.job.log.tgz.1, status_code=0, status=transferred
[2025-12-13 03:13:14] 2025-12-13 08:11:57,428 | INFO     | stage-out finished correctly
[2025-12-13 03:13:14] 2025-12-13 08:11:57,510 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-13 03:13:14] 2025-12-13 08:11:58,227 | INFO     | time since job start (4618s) is within the limit (174528.0s)
[2025-12-13 03:13:14] 2025-12-13 08:11:59,787 | INFO     | job 6929038244 has state=finished
[2025-12-13 03:13:14] 2025-12-13 08:11:59,787 | INFO     | preparing for final server update for job 6929038244 in state='finished'
[2025-12-13 03:13:14] 2025-12-13 08:11:59,788 | INFO     | this job has now completed (state=finished)
[2025-12-13 03:13:14] 2025-12-13 08:11:59,788 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-13 03:13:14] 2025-12-13 08:11:59,788 | INFO     | log transfer has been attempted: DONE
[2025-12-13 03:13:14] 2025-12-13 08:11:59,788 | INFO     | job 6929038244 has finished - writing final server update
[2025-12-13 03:13:14] 2025-12-13 08:11:59,789 | INFO     | total number of processed events: 400 (read)
[2025-12-13 03:13:14] 2025-12-13 08:11:59,790 | INFO     | executing command: lscpu
[2025-12-13 03:13:14] 2025-12-13 08:11:59,815 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-13 03:13:14] 2025-12-13 08:12:00,230 | INFO     | time since job start (4620s) is within the limit (174528.0s)
[2025-12-13 03:13:14] 2025-12-13 08:12:01,325 | WARNING  | process 25750 can no longer be monitored (due to stat problems) - aborting
[2025-12-13 03:13:14] 2025-12-13 08:12:01,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929038244/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 03:13:14] 2025-12-13 08:12:01,412 | INFO     | number of running child processes to parent process 25750: 1
[2025-12-13 03:13:14] 2025-12-13 08:12:01,412 | INFO     | maximum number of monitored processes: 6
[2025-12-13 03:13:14] 2025-12-13 08:12:02,235 | INFO     | time since job start (4622s) is within the limit (174528.0s)
[2025-12-13 03:13:14] 2025-12-13 08:12:03,915 | INFO     | monitor loop #345: job 0:6929038244 is in state 'finished'
[2025-12-13 03:13:14] 2025-12-13 08:12:03,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 03:13:14] 2025-12-13 08:12:04,240 | INFO     | time since job start (4624s) is within the limit (174528.0s)
[2025-12-13 03:13:14] 2025-12-13 08:12:04,241 | INFO     | 4626s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-13 03:13:14] 2025-12-13 08:12:05,963 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 03:13:14] 2025-12-13 08:12:05,967 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-12-13 03:13:14] 2025-12-13 08:12:05,969 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929038244/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 03:13:14] 2025-12-13 08:12:05,970 | INFO     | extracted standard info from prmon json
[2025-12-13 03:13:14] 2025-12-13 08:12:05,970 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 03:13:14] 2025-12-13 08:12:05,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 03:13:14] 2025-12-13 08:12:05,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 03:13:14] 2025-12-13 08:12:05,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 03:13:14] 2025-12-13 08:12:05,973 | INFO     | fitting pss+swap vs Time
[2025-12-13 03:13:14] 2025-12-13 08:12:05,974 | INFO     | sum of square deviations: 101843770.0
[2025-12-13 03:13:14] 2025-12-13 08:12:05,974 | INFO     | sum of deviations: -1927658072.0000002
[2025-12-13 03:13:14] 2025-12-13 08:12:05,975 | INFO     | mean x: 1765611309.0
[2025-12-13 03:13:14] 2025-12-13 08:12:05,975 | INFO     | mean y: 2663814.217391304
[2025-12-13 03:13:14] 2025-12-13 08:12:05,975 | INFO     | intersect: 33421447229.327976
[2025-12-13 03:13:14] 2025-12-13 08:12:05,975 | INFO     | chi2: 0.03707208877979739
[2025-12-13 03:13:14] 2025-12-13 08:12:05,975 | INFO     | current memory leak: -18.93 B/s (using 69 data points, chi2=0.04)
[2025-12-13 03:13:14] 2025-12-13 08:12:05,976 | INFO     | could have reported an average CPU frequency of 2050 MHz (6 samples)
[2025-12-13 03:13:14] 2025-12-13 08:12:05,976 | INFO     | ..............................
[2025-12-13 03:13:14] 2025-12-13 08:12:05,976 | INFO     | . Timing measurements:
[2025-12-13 03:13:14] 2025-12-13 08:12:05,976 | INFO     | . get job = 0 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . initial setup = 2 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . payload setup = 7 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . stage-in = 0 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . payload execution = 4588 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . stage-out = 0 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,977 | INFO     | . log creation = 0 s
[2025-12-13 03:13:14] 2025-12-13 08:12:05,978 | INFO     | ..............................
[2025-12-13 03:13:14] 2025-12-13 08:12:06,116 | INFO     | 
[2025-12-13 03:13:14] 2025-12-13 08:12:06,116 | INFO     | job summary report
[2025-12-13 03:13:14] 2025-12-13 08:12:06,116 | INFO     | --------------------------------------------------
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | PanDA job id: 6929038244
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | task id: 47886933
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | errors: (none)
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | pilot state: finished 
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | transexitcode: 0
[2025-12-13 03:13:14] 2025-12-13 08:12:06,117 | INFO     | exeerrorcode: 0
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | exeerrordiag: 
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | exitcode: 0
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | exitmsg: OK
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | cpuconsumptiontime: 49973 s
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | nevents: 400
[2025-12-13 03:13:14] 2025-12-13 08:12:06,118 | INFO     | neventsw: 0
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | pid: 25750
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | pgrp: 25750
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | corecount: 12
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | event service: False
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | sizes: {0: 2283959, 5: 2284221, 11: 2284277, 4599: 2310397, 4600: 2310396, 4601: 2319634, 4609: 2319772}
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | --------------------------------------------------
[2025-12-13 03:13:14] 2025-12-13 08:12:06,119 | INFO     | 
[2025-12-13 03:13:14] 2025-12-13 08:12:06,120 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 03:13:14] 2025-12-13 08:12:06,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,147 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 03:13:14] 2025-12-13 08:12:06,148 | INFO     | job 6929038244 has completed (purged errors)
[2025-12-13 03:13:14] 2025-12-13 08:12:06,148 | INFO     | overall cleanup function is called
[2025-12-13 03:13:14] 2025-12-13 08:12:07,155 | INFO     | --- collectZombieJob: --- 10, [25750]
[2025-12-13 03:13:14] 2025-12-13 08:12:07,155 | INFO     | zombie collector waiting for pid 25750
[2025-12-13 03:13:14] 2025-12-13 08:12:07,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 03:13:14] 2025-12-13 08:12:07,155 | INFO     | collected zombie processes
[2025-12-13 03:13:14] 2025-12-13 08:12:07,156 | INFO     | will attempt to kill all subprocesses of pid=25750
[2025-12-13 03:13:14] 2025-12-13 08:12:07,248 | INFO     | process IDs to be killed: [25750] (in reverse order)
[2025-12-13 03:13:14] 2025-12-13 08:12:07,300 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 03:13:14] 2025-12-13 08:12:07,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 03:13:14] 2025-12-13 08:12:07,304 | INFO     | did not find any defunct processes belonging to 25750
[2025-12-13 03:13:14] 2025-12-13 08:12:07,308 | INFO     | did not find any defunct processes belonging to 25750
[2025-12-13 03:13:14] 2025-12-13 08:12:07,308 | INFO     | ready for new job
[2025-12-13 03:13:14] 2025-12-13 08:12:07,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 03:13:14] 2025-12-13 08:12:07,309 | INFO     | ***************************************
[2025-12-13 03:13:14] 2025-12-13 08:12:07,309 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 03:13:14] 2025-12-13 08:12:07,309 | INFO     | ***************************************
[2025-12-13 03:13:14] 2025-12-13 08:12:07,310 | INFO     | 
[2025-12-13 03:13:14] 2025-12-13 08:12:07,310 | INFO     | architecture information:
[2025-12-13 03:13:14] 2025-12-13 08:12:07,311 | INFO     | executing command: cat /etc/os-release
[2025-12-13 03:13:14] 2025-12-13 08:12:07,326 | INFO     | cat /etc/os-release:
[2025-12-13 03:13:14] NAME="CentOS Linux"
[2025-12-13 03:13:14] VERSION="7 (Core)"
[2025-12-13 03:13:14] ID="centos"
[2025-12-13 03:13:14] ID_LIKE="rhel fedora"
[2025-12-13 03:13:14] VERSION_ID="7"
[2025-12-13 03:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 03:13:14] ANSI_COLOR="0;31"
[2025-12-13 03:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 03:13:14] HOME_URL="https://www.centos.org/"
[2025-12-13 03:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 03:13:14] 
[2025-12-13 03:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 03:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 03:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 03:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 03:13:14] 
[2025-12-13 03:13:14] 2025-12-13 08:12:07,326 | INFO     | ***************************************
[2025-12-13 03:13:14] 2025-12-13 08:12:07,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 03:13:14] 2025-12-13 08:12:07,847 | INFO     | sufficient remaining disk space (29454499840 B)
[2025-12-13 03:13:14] 2025-12-13 08:12:07,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 03:13:14] 2025-12-13 08:12:07,848 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 03:13:14] 2025-12-13 08:12:07,848 | INFO     | update_server=False
[2025-12-13 03:13:14] 2025-12-13 08:12:07,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 03:13:14] 2025-12-13 08:12:07,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 03:13:14] 2025-12-13 08:12:07,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 03:13:14] 2025-12-13 08:12:07,849 | INFO     | aborting loop
[2025-12-13 03:13:14] 2025-12-13 08:12:08,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 03:13:14] 2025-12-13 08:12:08,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 03:13:14] 2025-12-13 08:12:08,439 | INFO     | all data control threads have been joined
[2025-12-13 03:13:14] 2025-12-13 08:12:08,851 | INFO     | [job] queue monitor thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:08,854 | INFO     | [job] retrieve thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:08,855 | INFO     | [job] job monitor thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:08,875 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:09,171 | INFO     | all job control threads have been joined
[2025-12-13 03:13:14] 2025-12-13 08:12:09,208 | INFO     | all payload control threads have been joined
[2025-12-13 03:13:14] 2025-12-13 08:12:09,401 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:09,444 | INFO     | [data] control thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:09,708 | INFO     | [data] copytool_in thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,030 | INFO     | [data] copytool_out thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,177 | INFO     | [job] control thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,214 | INFO     | [payload] control thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,281 | INFO     | [payload] validate_post thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,321 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,341 | INFO     | [job] validate thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:10,447 | INFO     | [payload] failed_post thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:12,103 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:18,684 | INFO     | job.realtimelogging is not enabled
[2025-12-13 03:13:14] 2025-12-13 08:12:19,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 03:13:14] 2025-12-13 08:12:37,442 | INFO     | PID=19252 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 03:13:14] 2025-12-13 08:12:37,442 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 03:13:14] 2025-12-13 08:12:37,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 03:13:14] 2025-12-13 08:12:37,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 03:13:14] 2025-12-13 08:13:07,363 | INFO     | [monitor] cgroup control has ended
[2025-12-13 03:13:14] 2025-12-13 08:13:08,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631398975296)>', '<ExcThread(monitor, started 140630441322240)>']
[2025-12-13 03:13:14] 2025-12-13 08:13:09,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 03:13:14] 2025-12-13 08:13:09,599 | INFO     | [monitor] control thread has ended
[2025-12-13 03:13:14] 2025-12-13 08:13:13,713 | INFO     | all workflow threads have been joined
[2025-12-13 03:13:14] 2025-12-13 08:13:13,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 03:13:14] 2025-12-13 08:13:13,720 | INFO     | traces error code: 0
[2025-12-13 03:13:14] 2025-12-13 08:13:13,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 03:13:14] 2025-12-13 08:13:13,810 [wrapper] ==== pilot stdout END ====
[2025-12-13 03:13:14] 2025-12-13 08:13:13,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 03:13:14] 2025-12-13 08:13:13,818 [wrapper] pilotpid: 19252
[2025-12-13 03:13:14] 2025-12-13 08:13:13,822 [wrapper] Pilot exit status: 0
[2025-12-13 03:13:14] 2025-12-13 08:13:13,837 [wrapper] pandaids: 6929038244
[2025-12-13 03:13:14] 2025-12-13 08:13:13,884 [wrapper] cleanup supervisor_pilot 21904 19253
[2025-12-13 03:13:14] 2025-12-13 08:13:13,888 [wrapper] Test setup, not cleaning
[2025-12-13 03:13:14] 2025-12-13 08:13:13,892 [wrapper] apfmon messages muted
[2025-12-13 03:13:14] 2025-12-13 08:13:13,896 [wrapper] ==== wrapper stdout END ====
[2025-12-13 03:13:14] 2025-12-13 08:13:13,899 [wrapper] ==== wrapper stderr END ====
[2025-12-13 03:13:14]  *** Error codes and diagnostics ***
[2025-12-13 03:13:14]     "exeErrorCode": 0,
[2025-12-13 03:13:14]     "exeErrorDiag": "",
[2025-12-13 03:13:14]     "pilotErrorCode": 0,
[2025-12-13 03:13:14]     "pilotErrorDiag": "",
[2025-12-13 03:13:14]  *** Listing of results directory ***
[2025-12-13 03:13:14] total 335064
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 01:26 pilot3.tar.gz
[2025-12-13 03:13:14] -rwx------ 1 boincer umatlas     36322 Dec 13 01:48 runpilot2-wrapper.sh
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 01:49 queuedata.json
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas       100 Dec 13 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 03:13:14] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 01:54 run_atlas
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas       105 Dec 13 01:54 job.xml
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas 192441049 Dec 13 01:54 EVNT.47886929._000040.pool.root.1
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 01:54 start_atlas.sh
[2025-12-13 03:13:14] drwxrwx--x 2 boincer umatlas      4096 Dec 13 01:54 shared
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 01:54 input.tar.gz
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas         0 Dec 13 01:54 boinc_lockfile
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas      2510 Dec 13 01:54 pandaJob.out
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas        57 Dec 13 01:54 setup.sh.local
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas    991736 Dec 13 01:54 agis_schedconf.cvmfs.json
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas   1516240 Dec 13 01:54 agis_ddmendpoints.agis.ALL.json
[2025-12-13 03:13:14] drwx------ 5 boincer umatlas      4096 Dec 13 01:55 pilot3
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 03:10 init_data.xml
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas 144624079 Dec 13 03:11 HITS.47886933._000993.pool.root.1
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas      1048 Dec 13 03:11 memory_monitor_summary.json
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas       530 Dec 13 03:11 boinc_task_state.xml
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas    391016 Dec 13 03:11 log.47886933._000993.job.log.tgz.1
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas        95 Dec 13 03:12 pilot_heartbeat.json
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas      7843 Dec 13 03:12 heartbeat.json
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 03:13 boinc_mmap_file
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas        27 Dec 13 03:13 wrapper_checkpoint.txt
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas      4818 Dec 13 03:13 pilotlog.txt
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas    670441 Dec 13 03:13 log.47886933._000993.job.log.1
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas       357 Dec 13 03:13 output.list
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas       620 Dec 13 03:13 runtime_log
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas   1085440 Dec 13 03:13 result.tar.gz
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas      9339 Dec 13 03:13 runtime_log.err
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas       658 Dec 13 03:13 ItHNDm6bYo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml0RKDmO0ZO0n.diag
[2025-12-13 03:13:14] -rw-r--r-- 1 boincer umatlas     21917 Dec 13 03:13 stderr.txt
[2025-12-13 03:13:14] HITS file was successfully produced:
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas 144624079 Dec 13 03:11 shared/HITS.pool.root.1
[2025-12-13 03:13:14]  *** Contents of shared directory: ***
[2025-12-13 03:13:14] total 330824
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas 192441049 Dec 13 01:54 ATLAS.root_0
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 01:54 start_atlas.sh
[2025-12-13 03:13:14] -rw-r--r-- 2 boincer umatlas    592390 Dec 13 01:54 input.tar.gz
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas 144624079 Dec 13 03:11 HITS.pool.root.1
[2025-12-13 03:13:14] -rw------- 1 boincer umatlas   1085440 Dec 13 03:13 result.tar.gz
03:13:16 (15575): run_atlas exited; CPU time 49958.030046
03:13:16 (15575): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN