Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:23:42 (23464): wrapper (7.7.26015): starting
07:23:42 (23464): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 07:23:42] Arguments: --nthreads 8
[2025-12-13 07:23:42] Threads: 8
[2025-12-13 07:23:42] Checking for CVMFS
[2025-12-13 07:23:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 07:23:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 07:23:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 07:23:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 07:23:43] 2.11.2.0 16850 309435 140240 153951 1 112 22682323 25165825 4050 130560 11 145942409 99.877 85689611 2944 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 07:23:43] CVMFS is ok
[2025-12-13 07:23:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 07:23:43] Checking for apptainer binary...
[2025-12-13 07:23:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 07:23:43] Running /usr/bin/apptainer --version
[2025-12-13 07:23:43] apptainer version 1.3.2-1.el7
[2025-12-13 07:23:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 07:23:45] cg-vwn401.simple-grid.lan
[2025-12-13 07:23:45] apptainer works
[2025-12-13 07:23:45] Set ATHENA_PROC_NUMBER=8
[2025-12-13 07:23:45] Set ATHENA_CORE_NUMBER=8
[2025-12-13 07:23:45] Starting ATLAS job with PandaID=6929021580
[2025-12-13 07:23:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 12:57:11]  *** The last 200 lines of the pilot log: ***
[2025-12-13 12:57:11] 2025-12-13 11:56:12,610 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 12:57:11] 2025-12-13 11:56:12,612 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 12:57:11] 2025-12-13 11:56:12,613 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6929021580/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,614 | INFO     | extracted standard info from prmon json
[2025-12-13 12:57:11] 2025-12-13 11:56:12,614 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 12:57:11] 2025-12-13 11:56:12,615 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 12:57:11] 2025-12-13 11:56:12,615 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 12:57:11] 2025-12-13 11:56:12,615 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 12:57:11] 2025-12-13 11:56:12,632 | INFO     | fitting pss+swap vs Time
[2025-12-13 12:57:11] 2025-12-13 11:56:12,633 | INFO     | sum of square deviations: 10546523325.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,637 | INFO     | sum of deviations: -33140623265.999996
[2025-12-13 12:57:11] 2025-12-13 11:56:12,637 | INFO     | mean x: 1765616999.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,637 | INFO     | mean y: 2502784.0185185187
[2025-12-13 12:57:11] 2025-12-13 11:56:12,637 | INFO     | intersect: 5550648462.867126
[2025-12-13 12:57:11] 2025-12-13 11:56:12,638 | INFO     | chi2: 2.6328805082948596
[2025-12-13 12:57:11] 2025-12-13 11:56:12,638 | INFO     | sum of square deviations: 10065751520.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,641 | INFO     | sum of deviations: -11079390044.999998
[2025-12-13 12:57:11] 2025-12-13 11:56:12,642 | INFO     | mean x: 1765616847.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,642 | INFO     | mean y: 2509696.8777429466
[2025-12-13 12:57:11] 2025-12-13 11:56:12,642 | INFO     | intersect: 1945927203.168032
[2025-12-13 12:57:11] 2025-12-13 11:56:12,642 | INFO     | chi2: 1.865244733143618
[2025-12-13 12:57:11] 2025-12-13 11:56:12,642 | INFO     | current chi2=1.865244733143618 (change=29.155739226782764 %)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,643 | INFO     | sum of square deviations: 9599817202.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,653 | INFO     | sum of deviations: -10686274050.500011
[2025-12-13 12:57:11] 2025-12-13 11:56:12,654 | INFO     | mean x: 1765616694.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,654 | INFO     | mean y: 2509825.550955414
[2025-12-13 12:57:11] 2025-12-13 11:56:12,654 | INFO     | intersect: 1967949736.2871053
[2025-12-13 12:57:11] 2025-12-13 11:56:12,654 | INFO     | chi2: 1.8651266277625098
[2025-12-13 12:57:11] 2025-12-13 11:56:12,654 | INFO     | current chi2=1.8651266277625098 (change=0.0063318973113556986 %)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,655 | INFO     | right removable region: 313
[2025-12-13 12:57:11] 2025-12-13 11:56:12,655 | INFO     | sum of square deviations: 10065751520.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,658 | INFO     | sum of deviations: -88981870407.00002
[2025-12-13 12:57:11] 2025-12-13 11:56:12,658 | INFO     | mean x: 1765617152.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,659 | INFO     | mean y: 2520390.548589342
[2025-12-13 12:57:11] 2025-12-13 11:56:12,659 | INFO     | intersect: 15610685990.054708
[2025-12-13 12:57:11] 2025-12-13 11:56:12,659 | INFO     | chi2: 1.0138549960830983
[2025-12-13 12:57:11] 2025-12-13 11:56:12,659 | INFO     | current chi2=1.0138549960830983 (change=61.49255566711213 %)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,660 | INFO     | sum of square deviations: 9599817202.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,663 | INFO     | sum of deviations: -88710822061.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,663 | INFO     | mean x: 1765617304.5
[2025-12-13 12:57:11] 2025-12-13 11:56:12,663 | INFO     | mean y: 2520285.3152866242
[2025-12-13 12:57:11] 2025-12-13 11:56:12,663 | INFO     | intersect: 16318389559.098446
[2025-12-13 12:57:11] 2025-12-13 11:56:12,664 | INFO     | chi2: 0.9971406379159687
[2025-12-13 12:57:11] 2025-12-13 11:56:12,664 | INFO     | current chi2=0.9971406379159687 (change=1.648594545739119 %)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,664 | INFO     | left removable region: 20
[2025-12-13 12:57:11] 2025-12-13 11:56:12,665 | INFO     | sum of square deviations: 7799669962.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,667 | INFO     | sum of deviations: -46587329919.999985
[2025-12-13 12:57:11] 2025-12-13 11:56:12,668 | INFO     | mean x: 1765617274.0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,668 | INFO     | mean y: 2521411.5733788395
[2025-12-13 12:57:11] 2025-12-13 11:56:12,668 | INFO     | intersect: 10548531032.1134
[2025-12-13 12:57:11] 2025-12-13 11:56:12,675 | INFO     | chi2: 0.18195902889575002
[2025-12-13 12:57:11] 2025-12-13 11:56:12,676 | INFO     | current memory leak: -5.97 B/s (using 293 data points, chi2=0.18)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,684 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,684 | INFO     | ..............................
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . Timing measurements:
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . get job = 0 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . initial setup = 2 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . payload setup = 16 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . stage-in = 0 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . payload execution = 19759 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . stage-out = 3 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | . log creation = 1 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,685 | INFO     | ..............................
[2025-12-13 12:57:11] 2025-12-13 11:56:12,920 | INFO     | 
[2025-12-13 12:57:11] 2025-12-13 11:56:12,920 | INFO     | job summary report
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | --------------------------------------------------
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | PanDA job id: 6929021580
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | task id: 47898782
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | errors: (none)
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | pilot state: finished 
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | transexitcode: 0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | exeerrorcode: 0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | exeerrordiag: 
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | exitcode: 0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,921 | INFO     | exitmsg: OK
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | cpuconsumptiontime: 75153 s
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | nevents: 400
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | neventsw: 0
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | pid: 10818
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | pgrp: 10818
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | corecount: 8
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | event service: False
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | sizes: {0: 2283815, 1: 2284014, 12: 2284014, 15: 2284304, 23: 2284332, 19779: 2316885, 19783: 2325885, 19785: 2325941, 19870: 2326135}
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | --------------------------------------------------
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | 
[2025-12-13 12:57:11] 2025-12-13 11:56:12,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 12:57:11] 2025-12-13 11:56:13,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 12:57:11] 2025-12-13 11:56:13,225 | INFO     | job 6929021580 has completed (purged errors)
[2025-12-13 12:57:11] 2025-12-13 11:56:13,225 | INFO     | overall cleanup function is called
[2025-12-13 12:57:11] 2025-12-13 11:56:14,234 | INFO     | --- collectZombieJob: --- 10, [10818]
[2025-12-13 12:57:11] 2025-12-13 11:56:14,234 | INFO     | zombie collector waiting for pid 10818
[2025-12-13 12:57:11] 2025-12-13 11:56:14,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 12:57:11] 2025-12-13 11:56:14,235 | INFO     | collected zombie processes
[2025-12-13 12:57:11] 2025-12-13 11:56:14,235 | INFO     | will attempt to kill all subprocesses of pid=10818
[2025-12-13 12:57:11] 2025-12-13 11:56:14,354 | INFO     | process IDs to be killed: [10818] (in reverse order)
[2025-12-13 12:57:11] 2025-12-13 11:56:15,004 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 12:57:11] 2025-12-13 11:56:15,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 12:57:11] 2025-12-13 11:56:15,008 | INFO     | did not find any defunct processes belonging to 10818
[2025-12-13 12:57:11] 2025-12-13 11:56:15,011 | INFO     | did not find any defunct processes belonging to 10818
[2025-12-13 12:57:11] 2025-12-13 11:56:15,011 | INFO     | ready for new job
[2025-12-13 12:57:11] 2025-12-13 11:56:15,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 12:57:11] 2025-12-13 11:56:15,014 | INFO     | ***************************************
[2025-12-13 12:57:11] 2025-12-13 11:56:15,014 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 12:57:11] 2025-12-13 11:56:15,015 | INFO     | ***************************************
[2025-12-13 12:57:11] 2025-12-13 11:56:15,015 | INFO     | 
[2025-12-13 12:57:11] 2025-12-13 11:56:15,015 | INFO     | pilot is running in a VM
[2025-12-13 12:57:11] 2025-12-13 11:56:15,015 | INFO     | architecture information:
[2025-12-13 12:57:11] 2025-12-13 11:56:15,016 | INFO     | executing command: cat /etc/os-release
[2025-12-13 12:57:11] 2025-12-13 11:56:15,053 | INFO     | cat /etc/os-release:
[2025-12-13 12:57:11] NAME="CentOS Linux"
[2025-12-13 12:57:11] VERSION="7 (Core)"
[2025-12-13 12:57:11] ID="centos"
[2025-12-13 12:57:11] ID_LIKE="rhel fedora"
[2025-12-13 12:57:11] VERSION_ID="7"
[2025-12-13 12:57:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 12:57:11] ANSI_COLOR="0;31"
[2025-12-13 12:57:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 12:57:11] HOME_URL="https://www.centos.org/"
[2025-12-13 12:57:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 12:57:11] 
[2025-12-13 12:57:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 12:57:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 12:57:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 12:57:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 12:57:11] 
[2025-12-13 12:57:11] 2025-12-13 11:56:15,053 | INFO     | ***************************************
[2025-12-13 12:57:11] 2025-12-13 11:56:15,556 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-13 12:57:11] 2025-12-13 11:56:15,603 | INFO     | sufficient remaining disk space (496030973952 B)
[2025-12-13 12:57:11] 2025-12-13 11:56:15,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 12:57:11] 2025-12-13 11:56:15,604 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 12:57:11] 2025-12-13 11:56:15,604 | INFO     | update_server=False
[2025-12-13 12:57:11] 2025-12-13 11:56:15,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 12:57:11] 2025-12-13 11:56:15,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 12:57:11] 2025-12-13 11:56:15,734 | INFO     | all job control threads have been joined
[2025-12-13 12:57:11] 2025-12-13 11:56:15,745 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:57:11] 2025-12-13 11:56:15,745 | INFO     | aborting loop
[2025-12-13 12:57:11] 2025-12-13 11:56:15,827 | INFO     | all data control threads have been joined
[2025-12-13 12:57:11] 2025-12-13 11:56:16,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 12:57:11] 2025-12-13 11:56:16,610 | INFO     | [job] retrieve thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:16,740 | INFO     | [job] control thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:16,751 | INFO     | [job] job monitor thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:16,834 | INFO     | [data] control thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:16,872 | INFO     | [job] validate thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:16,883 | INFO     | all payload control threads have been joined
[2025-12-13 12:57:11] 2025-12-13 11:56:16,903 | INFO     | [data] copytool_in thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:17,283 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:17,434 | INFO     | [payload] validate_post thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:17,718 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:17,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 12:57:11] 2025-12-13 11:56:17,889 | INFO     | [payload] control thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:17,951 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:18,020 | INFO     | [payload] failed_post thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:18,315 | INFO     | [data] copytool_out thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:18,836 | INFO     | [job] queue monitor thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:19,615 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:25,782 | INFO     | job.realtimelogging is not enabled
[2025-12-13 12:57:11] 2025-12-13 11:56:26,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 12:57:11] 2025-12-13 11:56:45,300 | INFO     | PID=30804 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 12:57:11] 2025-12-13 11:56:45,300 | INFO     | .. there are 9 such processes running
[2025-12-13 12:57:11] 2025-12-13 11:56:45,301 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 12:57:11] 2025-12-13 11:56:45,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 12:57:11] 2025-12-13 11:56:45,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 12:57:11] 2025-12-13 11:57:01,153 | INFO     | [monitor] cgroup control has ended
[2025-12-13 12:57:11] 2025-12-13 11:57:01,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705867913024)>', '<ExcThread(monitor, started 139705580496640)>']
[2025-12-13 12:57:11] 2025-12-13 11:57:02,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 12:57:11] 2025-12-13 11:57:02,404 | INFO     | [monitor] control thread has ended
[2025-12-13 12:57:11] 2025-12-13 11:57:06,740 | INFO     | all workflow threads have been joined
[2025-12-13 12:57:11] 2025-12-13 11:57:06,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 12:57:11] 2025-12-13 11:57:06,741 | INFO     | traces error code: 0
[2025-12-13 12:57:11] 2025-12-13 11:57:06,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 12:57:11] 2025-12-13 11:57:07,197 [wrapper] ==== pilot stdout END ====
[2025-12-13 12:57:11] 2025-12-13 11:57:07,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 12:57:11] 2025-12-13 11:57:07,301 [wrapper] pilotpid: 30804
[2025-12-13 12:57:11] 2025-12-13 11:57:07,353 [wrapper] Pilot exit status: 0
[2025-12-13 12:57:11] 2025-12-13 11:57:07,744 [wrapper] pandaids: 6929021580
[2025-12-13 12:57:11] 2025-12-13 11:57:08,688 [wrapper] cleanup supervisor_pilot 16874 30805
[2025-12-13 12:57:11] 2025-12-13 11:57:08,798 [wrapper] Test setup, not cleaning
[2025-12-13 12:57:11] 2025-12-13 11:57:08,874 [wrapper] apfmon messages muted
[2025-12-13 12:57:11] 2025-12-13 11:57:08,915 [wrapper] ==== wrapper stdout END ====
[2025-12-13 12:57:11] 2025-12-13 11:57:08,978 [wrapper] ==== wrapper stderr END ====
[2025-12-13 12:57:11]  *** Error codes and diagnostics ***
[2025-12-13 12:57:11]     "exeErrorCode": 0,
[2025-12-13 12:57:11]     "exeErrorDiag": "",
[2025-12-13 12:57:11]     "pilotErrorCode": 0,
[2025-12-13 12:57:11]     "pilotErrorDiag": "",
[2025-12-13 12:57:11]  *** Listing of results directory ***
[2025-12-13 12:57:11] total 409540
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc    579449 Dec 13 06:46 pilot3.tar.gz
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc      5112 Dec 13 07:02 queuedata.json
[2025-12-13 12:57:11] -rwx------. 1 boinc boinc     36322 Dec 13 07:05 runpilot2-wrapper.sh
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc       100 Dec 13 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 12:57:11] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 07:23 run_atlas
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc       105 Dec 13 07:23 job.xml
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc 213729792 Dec 13 07:23 EVNT.47898779._000064.pool.root.1
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc      6393 Dec 13 07:23 init_data.xml
[2025-12-13 12:57:11] drwxrwx--x. 2 boinc boinc        68 Dec 13 07:23 shared
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc    592386 Dec 13 07:23 input.tar.gz
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc     15847 Dec 13 07:23 start_atlas.sh
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc         0 Dec 13 07:23 boinc_lockfile
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc      2528 Dec 13 07:23 pandaJob.out
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc    991736 Dec 13 07:24 agis_schedconf.cvmfs.json
[2025-12-13 12:57:11] drwx------. 5 boinc boinc      4096 Dec 13 07:24 pilot3
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc 195343787 Dec 13 12:53 HITS.47898782._001090.pool.root.1
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc       531 Dec 13 12:53 boinc_task_state.xml
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc      1015 Dec 13 12:54 memory_monitor_summary.json
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc   1516240 Dec 13 12:54 agis_ddmendpoints.agis.ALL.json
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc    534059 Dec 13 12:54 log.47898782._001090.job.log.tgz.1
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc      7770 Dec 13 12:56 heartbeat.json
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc        95 Dec 13 12:56 pilot_heartbeat.json
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc      8192 Dec 13 12:57 boinc_mmap_file
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc        28 Dec 13 12:57 wrapper_checkpoint.txt
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc      4957 Dec 13 12:57 pilotlog.txt
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc   2661228 Dec 13 12:57 log.47898782._001090.job.log.1
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc       357 Dec 13 12:57 output.list
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc       620 Dec 13 12:57 runtime_log
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc   3215360 Dec 13 12:57 result.tar.gz
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc      8833 Dec 13 12:57 runtime_log.err
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc       658 Dec 13 12:57 m04NDmgvXo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmstNKDm1mSaGo.diag
[2025-12-13 12:57:11] -rw-r--r--. 1 boinc boinc     20741 Dec 13 12:57 stderr.txt
[2025-12-13 12:57:11] HITS file was successfully produced:
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc 195343787 Dec 13 12:53 shared/HITS.pool.root.1
[2025-12-13 12:57:11]  *** Contents of shared directory: ***
[2025-12-13 12:57:11] total 403228
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc 213729792 Dec 13 07:23 ATLAS.root_0
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc    592386 Dec 13 07:23 input.tar.gz
[2025-12-13 12:57:11] -rw-r--r--. 2 boinc boinc     15847 Dec 13 07:23 start_atlas.sh
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc 195343787 Dec 13 12:53 HITS.pool.root.1
[2025-12-13 12:57:11] -rw-------. 1 boinc boinc   3215360 Dec 13 12:57 result.tar.gz
12:57:13 (23464): run_atlas exited; CPU time 75420.428882
12:57:13 (23464): called boinc_finish(0)

</stderr_txt>
]]>

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