Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:12:49 (31909): wrapper (7.7.26015): starting
01:12:49 (31909): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 01:12:49] Arguments: --nthreads 8
[2025-12-13 01:12:49] Threads: 8
[2025-12-13 01:12:49] Checking for CVMFS
[2025-12-13 01:12:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 01:12:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 01:12:49] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 01:12:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 01:12:50] 2.11.2.0 2797 89819 83192 153950 3 59 12045969 20275201 1 130560 0 22491932 99.848 5183948 31774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 01:12:50] CVMFS is ok
[2025-12-13 01:12:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 01:12:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 01:12:50] Further information can be found at the LHC@home message board.
[2025-12-13 01:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 01:12:50] Checking for apptainer binary...
[2025-12-13 01:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 01:12:50] Running /usr/bin/apptainer --version
[2025-12-13 01:12:50] apptainer version 1.3.2-1.el7
[2025-12-13 01:12:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 01:12:51] c-204-11.aglt2.org
[2025-12-13 01:12:51] apptainer works
[2025-12-13 01:12:52] Set ATHENA_PROC_NUMBER=8
[2025-12-13 01:12:52] Set ATHENA_CORE_NUMBER=8
[2025-12-13 01:12:52] Starting ATLAS job with PandaID=6929021585
[2025-12-13 01:12:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 04:08:37]  *** The last 200 lines of the pilot log: ***
[2025-12-13 04:08:38] 2025-12-13 09:08:04,345 | INFO     | time since job start (10493s) is within the limit (174528.0s)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,563 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 04:08:38] 2025-12-13 09:08:04,566 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-13 04:08:38] 2025-12-13 09:08:04,568 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929021585/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,569 | INFO     | extracted standard info from prmon json
[2025-12-13 04:08:38] 2025-12-13 09:08:04,569 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 04:08:38] 2025-12-13 09:08:04,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 04:08:38] 2025-12-13 09:08:04,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 04:08:38] 2025-12-13 09:08:04,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 04:08:38] 2025-12-13 09:08:04,574 | INFO     | fitting pss+swap vs Time
[2025-12-13 04:08:38] 2025-12-13 09:08:04,575 | INFO     | sum of square deviations: 1577789583.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,576 | INFO     | sum of deviations: 9958934298.000008
[2025-12-13 04:08:38] 2025-12-13 09:08:04,576 | INFO     | mean x: 1765611637.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,576 | INFO     | mean y: 2468809.930232558
[2025-12-13 04:08:38] 2025-12-13 09:08:04,576 | INFO     | intersect: -11141989540.601738
[2025-12-13 04:08:38] 2025-12-13 09:08:04,576 | INFO     | chi2: 2.1533296101680635
[2025-12-13 04:08:38] 2025-12-13 09:08:04,577 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,577 | INFO     | sum of deviations: 20890243732.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,578 | INFO     | mean x: 1765611485.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,578 | INFO     | mean y: 2480979.1916167666
[2025-12-13 04:08:38] 2025-12-13 09:08:04,578 | INFO     | intersect: -25537842137.514484
[2025-12-13 04:08:38] 2025-12-13 09:08:04,578 | INFO     | chi2: 1.378976256308246
[2025-12-13 04:08:38] 2025-12-13 09:08:04,578 | INFO     | current chi2=1.378976256308246 (change=35.96074424478752 %)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,579 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,579 | INFO     | sum of deviations: 20290543490.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | mean x: 1765611332.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | mean y: 2480252.425925926
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | intersect: -27173290398.016083
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | chi2: 1.3799363940671385
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | current chi2=1.3799363940671385 (change=-0.06962685213036515 %)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,580 | INFO     | right removable region: 161
[2025-12-13 04:08:38] 2025-12-13 09:08:04,581 | INFO     | sum of square deviations: 1444149868.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | sum of deviations: -14063093476.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | mean x: 1765611790.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | mean y: 2495865.0718562873
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | intersect: 17195977092.532444
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | chi2: 0.8645018072672409
[2025-12-13 04:08:38] 2025-12-13 09:08:04,582 | INFO     | current chi2=0.8645018072672409 (change=59.8527878321532 %)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,583 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | sum of deviations: -18936119681.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | mean x: 1765611942.5
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | mean y: 2501704.7592592593
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | intersect: 25364258205.013004
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | chi2: 0.8085759552872581
[2025-12-13 04:08:38] 2025-12-13 09:08:04,584 | INFO     | current chi2=0.8085759552872581 (change=6.469142286326603 %)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,585 | INFO     | left removable region: 20
[2025-12-13 04:08:38] 2025-12-13 09:08:04,585 | INFO     | sum of square deviations: 869188390.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,585 | INFO     | sum of deviations: -6657844328.999999
[2025-12-13 04:08:38] 2025-12-13 09:08:04,586 | INFO     | mean x: 1765611912.0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,586 | INFO     | mean y: 2514815.0070921984
[2025-12-13 04:08:38] 2025-12-13 09:08:04,586 | INFO     | intersect: 13526820236.90078
[2025-12-13 04:08:38] 2025-12-13 09:08:04,586 | INFO     | chi2: 0.011438427732489355
[2025-12-13 04:08:38] 2025-12-13 09:08:04,586 | INFO     | current memory leak: -7.66 B/s (using 141 data points, chi2=0.01)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | could have reported an average CPU frequency of 2014 MHz (9 samples)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | ..............................
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | . Timing measurements:
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | . get job = 0 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | . initial setup = 2 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | . payload setup = 8 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,587 | INFO     | . stage-in = 0 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,588 | INFO     | . payload execution = 10452 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,588 | INFO     | . stage-out = 0 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,588 | INFO     | . log creation = 0 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,588 | INFO     | ..............................
[2025-12-13 04:08:38] 2025-12-13 09:08:04,994 | INFO     | 
[2025-12-13 04:08:38] 2025-12-13 09:08:04,994 | INFO     | job summary report
[2025-12-13 04:08:38] 2025-12-13 09:08:04,994 | INFO     | --------------------------------------------------
[2025-12-13 04:08:38] 2025-12-13 09:08:04,995 | INFO     | PanDA job id: 6929021585
[2025-12-13 04:08:38] 2025-12-13 09:08:04,995 | INFO     | task id: 47898782
[2025-12-13 04:08:38] 2025-12-13 09:08:04,995 | INFO     | errors: (none)
[2025-12-13 04:08:38] 2025-12-13 09:08:04,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 04:08:38] 2025-12-13 09:08:04,995 | INFO     | pilot state: finished 
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | transexitcode: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | exeerrorcode: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | exeerrordiag: 
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | exitcode: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | exitmsg: OK
[2025-12-13 04:08:38] 2025-12-13 09:08:04,996 | INFO     | cpuconsumptiontime: 78690 s
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | nevents: 400
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | neventsw: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | pid: 10072
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | pgrp: 10072
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | corecount: 8
[2025-12-13 04:08:38] 2025-12-13 09:08:04,997 | INFO     | event service: False
[2025-12-13 04:08:38] 2025-12-13 09:08:04,998 | INFO     | sizes: {0: 2283758, 1: 2284013, 7: 2284275, 12: 2284303, 10465: 2313193, 10467: 2322191, 10468: 2322375, 10477: 2322633}
[2025-12-13 04:08:38] 2025-12-13 09:08:04,998 | INFO     | --------------------------------------------------
[2025-12-13 04:08:38] 2025-12-13 09:08:04,998 | INFO     | 
[2025-12-13 04:08:38] 2025-12-13 09:08:04,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 04:08:38] 2025-12-13 09:08:05,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 04:08:38] 2025-12-13 09:08:05,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 04:08:38] 2025-12-13 09:08:05,029 | INFO     | job 6929021585 has completed (purged errors)
[2025-12-13 04:08:38] 2025-12-13 09:08:05,030 | INFO     | overall cleanup function is called
[2025-12-13 04:08:38] 2025-12-13 09:08:05,463 | INFO     | PID=3638 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 04:08:38] 2025-12-13 09:08:06,035 | INFO     | --- collectZombieJob: --- 10, [10072]
[2025-12-13 04:08:38] 2025-12-13 09:08:06,035 | INFO     | zombie collector waiting for pid 10072
[2025-12-13 04:08:38] 2025-12-13 09:08:06,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 04:08:38] 2025-12-13 09:08:06,036 | INFO     | collected zombie processes
[2025-12-13 04:08:38] 2025-12-13 09:08:06,036 | INFO     | will attempt to kill all subprocesses of pid=10072
[2025-12-13 04:08:38] 2025-12-13 09:08:06,125 | INFO     | process IDs to be killed: [10072] (in reverse order)
[2025-12-13 04:08:38] 2025-12-13 09:08:06,182 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 04:08:38] 2025-12-13 09:08:06,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 04:08:38] 2025-12-13 09:08:06,187 | INFO     | did not find any defunct processes belonging to 10072
[2025-12-13 04:08:38] 2025-12-13 09:08:06,191 | INFO     | did not find any defunct processes belonging to 10072
[2025-12-13 04:08:38] 2025-12-13 09:08:06,192 | INFO     | ready for new job
[2025-12-13 04:08:38] 2025-12-13 09:08:06,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 04:08:38] 2025-12-13 09:08:06,194 | INFO     | ***************************************
[2025-12-13 04:08:38] 2025-12-13 09:08:06,194 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 04:08:38] 2025-12-13 09:08:06,194 | INFO     | ***************************************
[2025-12-13 04:08:38] 2025-12-13 09:08:06,194 | INFO     | 
[2025-12-13 04:08:38] 2025-12-13 09:08:06,195 | INFO     | architecture information:
[2025-12-13 04:08:38] 2025-12-13 09:08:06,195 | INFO     | executing command: cat /etc/os-release
[2025-12-13 04:08:38] 2025-12-13 09:08:06,210 | INFO     | cat /etc/os-release:
[2025-12-13 04:08:38] NAME="CentOS Linux"
[2025-12-13 04:08:38] VERSION="7 (Core)"
[2025-12-13 04:08:38] ID="centos"
[2025-12-13 04:08:38] ID_LIKE="rhel fedora"
[2025-12-13 04:08:38] VERSION_ID="7"
[2025-12-13 04:08:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 04:08:38] ANSI_COLOR="0;31"
[2025-12-13 04:08:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 04:08:38] HOME_URL="https://www.centos.org/"
[2025-12-13 04:08:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 04:08:38] 
[2025-12-13 04:08:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 04:08:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 04:08:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 04:08:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 04:08:38] 
[2025-12-13 04:08:38] 2025-12-13 09:08:06,211 | INFO     | ***************************************
[2025-12-13 04:08:38] 2025-12-13 09:08:06,714 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 04:08:38] 2025-12-13 09:08:06,732 | INFO     | sufficient remaining disk space (18582863872 B)
[2025-12-13 04:08:38] 2025-12-13 09:08:06,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 04:08:38] 2025-12-13 09:08:06,732 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 04:08:38] 2025-12-13 09:08:06,733 | INFO     | update_server=False
[2025-12-13 04:08:38] 2025-12-13 09:08:06,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 04:08:38] 2025-12-13 09:08:06,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:08:38] 2025-12-13 09:08:06,733 | INFO     | aborting loop
[2025-12-13 04:08:38] 2025-12-13 09:08:06,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 04:08:38] 2025-12-13 09:08:07,162 | INFO     | all data control threads have been joined
[2025-12-13 04:08:38] 2025-12-13 09:08:07,497 | INFO     | all job control threads have been joined
[2025-12-13 04:08:38] 2025-12-13 09:08:07,722 | INFO     | all payload control threads have been joined
[2025-12-13 04:08:38] 2025-12-13 09:08:07,738 | INFO     | [job] retrieve thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:07,739 | INFO     | [job] job monitor thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:07,942 | INFO     | [payload] failed_post thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 04:08:38] 2025-12-13 09:08:08,154 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,167 | INFO     | [data] control thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,174 | INFO     | [job] validate thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,454 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,476 | INFO     | [payload] validate_post thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,496 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,502 | INFO     | [data] copytool_in thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,503 | INFO     | [job] control thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:08,728 | INFO     | [payload] control thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:09,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:08:38] 2025-12-13 09:08:10,147 | INFO     | [data] copytool_out thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:10,693 | INFO     | [job] queue monitor thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:10,789 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:17,487 | INFO     | job.realtimelogging is not enabled
[2025-12-13 04:08:38] 2025-12-13 09:08:18,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 04:08:38] 2025-12-13 09:08:27,848 | INFO     | [monitor] cgroup control has ended
[2025-12-13 04:08:38] 2025-12-13 09:08:29,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765289031488)>', '<ExcThread(monitor, started 139764468541184)>']
[2025-12-13 04:08:38] 2025-12-13 09:08:34,718 | INFO     | all workflow threads have been joined
[2025-12-13 04:08:38] 2025-12-13 09:08:34,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 04:08:38] 2025-12-13 09:08:34,736 | INFO     | traces error code: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:34,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 04:08:38] 2025-12-13 09:08:37,683 | INFO     | PID=3638 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 04:08:38] 2025-12-13 09:08:37,684 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 04:08:38] 2025-12-13 09:08:37,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 04:08:38] 2025-12-13 09:08:37,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 04:08:38] 2025-12-13 09:08:37,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 04:08:38] 2025-12-13 09:08:37,684 | INFO     | [monitor] control thread has ended
[2025-12-13 04:08:38] 2025-12-13 09:08:37,784 [wrapper] ==== pilot stdout END ====
[2025-12-13 04:08:38] 2025-12-13 09:08:37,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 04:08:38] 2025-12-13 09:08:37,792 [wrapper] pilotpid: 3638
[2025-12-13 04:08:38] 2025-12-13 09:08:37,796 [wrapper] Pilot exit status: 0
[2025-12-13 04:08:38] 2025-12-13 09:08:37,811 [wrapper] pandaids: 6929021585
[2025-12-13 04:08:38] 2025-12-13 09:08:37,854 [wrapper] cleanup supervisor_pilot 18265 3639
[2025-12-13 04:08:38] 2025-12-13 09:08:37,858 [wrapper] Test setup, not cleaning
[2025-12-13 04:08:38] 2025-12-13 09:08:37,862 [wrapper] apfmon messages muted
[2025-12-13 04:08:38] 2025-12-13 09:08:37,867 [wrapper] ==== wrapper stdout END ====
[2025-12-13 04:08:38] 2025-12-13 09:08:37,871 [wrapper] ==== wrapper stderr END ====
[2025-12-13 04:08:38]  *** Error codes and diagnostics ***
[2025-12-13 04:08:38]     "exeErrorCode": 0,
[2025-12-13 04:08:38]     "exeErrorDiag": "",
[2025-12-13 04:08:38]     "pilotErrorCode": 0,
[2025-12-13 04:08:38]     "pilotErrorDiag": "",
[2025-12-13 04:08:38]  *** Listing of results directory ***
[2025-12-13 04:08:38] total 409188
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas    579449 Dec 13 00:46 pilot3.tar.gz
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas      5112 Dec 13 01:02 queuedata.json
[2025-12-13 04:08:38] -rwx------ 1 boincer umatlas     36322 Dec 13 01:04 runpilot2-wrapper.sh
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas       100 Dec 13 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 04:08:38] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 01:12 run_atlas
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas       105 Dec 13 01:12 job.xml
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas 213729792 Dec 13 01:12 EVNT.47898779._000064.pool.root.1
[2025-12-13 04:08:38] drwxrwx--x 2 boincer umatlas      4096 Dec 13 01:12 shared
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 01:12 input.tar.gz
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 01:12 start_atlas.sh
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas         0 Dec 13 01:12 boinc_lockfile
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas      2528 Dec 13 01:12 pandaJob.out
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas        57 Dec 13 01:12 setup.sh.local
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas    991736 Dec 13 01:13 agis_schedconf.cvmfs.json
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas   1516240 Dec 13 01:13 agis_ddmendpoints.agis.ALL.json
[2025-12-13 04:08:38] drwx------ 5 boincer umatlas      4096 Dec 13 01:13 pilot3
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas      5911 Dec 13 04:04 init_data.xml
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas 197614878 Dec 13 04:07 HITS.47898782._001095.pool.root.1
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas       530 Dec 13 04:07 boinc_task_state.xml
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas        95 Dec 13 04:07 pilot_heartbeat.json
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas      1049 Dec 13 04:07 memory_monitor_summary.json
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas    416835 Dec 13 04:07 log.47898782._001095.job.log.tgz.1
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas      7842 Dec 13 04:08 heartbeat.json
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas        28 Dec 13 04:08 wrapper_checkpoint.txt
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 04:08 boinc_mmap_file
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas       744 Dec 13 04:08 pilotlog.txt
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas   1456103 Dec 13 04:08 log.47898782._001095.job.log.1
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas       357 Dec 13 04:08 output.list
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas       620 Dec 13 04:08 runtime_log
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas   1894400 Dec 13 04:08 result.tar.gz
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 04:08 runtime_log.err
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas       662 Dec 13 04:08 rQGKDmHvXo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmetNKDmBDKRcm.diag
[2025-12-13 04:08:38] -rw-r--r-- 1 boincer umatlas     21149 Dec 13 04:08 stderr.txt
[2025-12-13 04:08:38] HITS file was successfully produced:
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas 197614878 Dec 13 04:07 shared/HITS.pool.root.1
[2025-12-13 04:08:38]  *** Contents of shared directory: ***
[2025-12-13 04:08:38] total 404160
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas 213729792 Dec 13 01:12 ATLAS.root_0
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas    592383 Dec 13 01:12 input.tar.gz
[2025-12-13 04:08:38] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 01:12 start_atlas.sh
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas 197614878 Dec 13 04:07 HITS.pool.root.1
[2025-12-13 04:08:38] -rw------- 1 boincer umatlas   1894400 Dec 13 04:08 result.tar.gz
04:08:39 (31909): run_atlas exited; CPU time 78638.365356
04:08:39 (31909): called boinc_finish(0)

</stderr_txt>
]]>

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