Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:57:17 (19048): wrapper (7.7.26015): starting
12:57:17 (19048): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 12:57:17] Arguments: --nthreads 8
[2025-12-13 12:57:17] Threads: 8
[2025-12-13 12:57:17] Checking for CVMFS
[2025-12-13 12:57:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 12:57:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 12:57:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 12:57:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 12:57:20] 2.11.2.0 16850 309769 140744 153959 0 94 22821150 25165824 4465 130560 11 146146104 99.877 85731493 2944 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 12:57:20] CVMFS is ok
[2025-12-13 12:57:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 12:57:20] Checking for apptainer binary...
[2025-12-13 12:57:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 12:57:20] Running /usr/bin/apptainer --version
[2025-12-13 12:57:20] apptainer version 1.3.2-1.el7
[2025-12-13 12:57:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 12:57:33] cg-vwn401.simple-grid.lan
[2025-12-13 12:57:33] apptainer works
[2025-12-13 12:57:33] Set ATHENA_PROC_NUMBER=8
[2025-12-13 12:57:33] Set ATHENA_CORE_NUMBER=8
[2025-12-13 12:57:33] Starting ATLAS job with PandaID=6929021245
[2025-12-13 12:57:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 18:47:58]  *** The last 200 lines of the pilot log: ***
[2025-12-13 18:47:58] 2025-12-13 17:47:25,662 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 18:47:58] 2025-12-13 17:47:25,663 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 18:47:58] 2025-12-13 17:47:25,665 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6929021245/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,666 | INFO     | extracted standard info from prmon json
[2025-12-13 18:47:58] 2025-12-13 17:47:25,666 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 18:47:58] 2025-12-13 17:47:25,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 18:47:58] 2025-12-13 17:47:25,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 18:47:58] 2025-12-13 17:47:25,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 18:47:58] 2025-12-13 17:47:25,674 | INFO     | fitting pss+swap vs Time
[2025-12-13 18:47:58] 2025-12-13 17:47:25,675 | INFO     | sum of square deviations: 11553509647.5
[2025-12-13 18:47:58] 2025-12-13 17:47:25,678 | INFO     | sum of deviations: 105320543995.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,679 | INFO     | mean x: 1765637859.5
[2025-12-13 18:47:58] 2025-12-13 17:47:25,679 | INFO     | mean y: 2459681.754491018
[2025-12-13 18:47:58] 2025-12-13 17:47:25,680 | INFO     | intersect: -16092904024.54109
[2025-12-13 18:47:58] 2025-12-13 17:47:25,680 | INFO     | chi2: 4.760095043034465
[2025-12-13 18:47:58] 2025-12-13 17:47:25,681 | INFO     | sum of square deviations: 11042365180.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,684 | INFO     | sum of deviations: 125670152779.00002
[2025-12-13 18:47:58] 2025-12-13 17:47:25,685 | INFO     | mean x: 1765637707.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,685 | INFO     | mean y: 2465672.887537994
[2025-12-13 18:47:58] 2025-12-13 17:47:25,685 | INFO     | intersect: -20091776527.410103
[2025-12-13 18:47:58] 2025-12-13 17:47:25,686 | INFO     | chi2: 4.0072459689296345
[2025-12-13 18:47:58] 2025-12-13 17:47:25,686 | INFO     | current chi2=4.0072459689296345 (change=15.815841223726995 %)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,686 | INFO     | right removable region: 328
[2025-12-13 18:47:58] 2025-12-13 17:47:25,686 | INFO     | sum of square deviations: 11042365180.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,690 | INFO     | sum of deviations: 4612988177.000008
[2025-12-13 18:47:58] 2025-12-13 17:47:25,690 | INFO     | mean x: 1765638012.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,690 | INFO     | mean y: 2489684.7781155016
[2025-12-13 18:47:58] 2025-12-13 17:47:25,691 | INFO     | intersect: -735112010.2799171
[2025-12-13 18:47:58] 2025-12-13 17:47:25,691 | INFO     | chi2: 1.2853473905955095
[2025-12-13 18:47:58] 2025-12-13 17:47:25,691 | INFO     | current chi2=1.2853473905955095 (change=72.99744271962842 %)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,692 | INFO     | sum of square deviations: 10546523325.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,695 | INFO     | sum of deviations: -28993730507.499996
[2025-12-13 18:47:58] 2025-12-13 17:47:25,696 | INFO     | mean x: 1765638164.5
[2025-12-13 18:47:58] 2025-12-13 17:47:25,696 | INFO     | mean y: 2499978.8055555555
[2025-12-13 18:47:58] 2025-12-13 17:47:25,696 | INFO     | intersect: 4856463274.361055
[2025-12-13 18:47:58] 2025-12-13 17:47:25,697 | INFO     | chi2: 0.828922241380475
[2025-12-13 18:47:58] 2025-12-13 17:47:25,697 | INFO     | current chi2=0.828922241380475 (change=35.50986702540936 %)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,697 | INFO     | sum of square deviations: 10065751520.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,701 | INFO     | sum of deviations: -33245703939.999992
[2025-12-13 18:47:58] 2025-12-13 17:47:25,701 | INFO     | mean x: 1765638317.0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,701 | INFO     | mean y: 2501315.0094043887
[2025-12-13 18:47:58] 2025-12-13 17:47:25,701 | INFO     | intersect: 5834146238.438018
[2025-12-13 18:47:58] 2025-12-13 17:47:25,702 | INFO     | chi2: 0.8105246054515332
[2025-12-13 18:47:58] 2025-12-13 17:47:25,702 | INFO     | current chi2=0.8105246054515332 (change=2.2194646265375484 %)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,702 | INFO     | left removable region: 30
[2025-12-13 18:47:58] 2025-12-13 17:47:25,703 | INFO     | sum of square deviations: 8205826414.5
[2025-12-13 18:47:58] 2025-12-13 17:47:25,706 | INFO     | sum of deviations: -9205235866.000002
[2025-12-13 18:47:58] 2025-12-13 17:47:25,706 | INFO     | mean x: 1765638591.5
[2025-12-13 18:47:58] 2025-12-13 17:47:25,706 | INFO     | mean y: 2507332.9932885906
[2025-12-13 18:47:58] 2025-12-13 17:47:25,706 | INFO     | intersect: 1983187750.5255995
[2025-12-13 18:47:58] 2025-12-13 17:47:25,707 | INFO     | chi2: 0.023768158316841436
[2025-12-13 18:47:58] 2025-12-13 17:47:25,707 | INFO     | current memory leak: -1.12 B/s (using 298 data points, chi2=0.02)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,708 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,708 | INFO     | ..............................
[2025-12-13 18:47:58] 2025-12-13 17:47:25,708 | INFO     | . Timing measurements:
[2025-12-13 18:47:58] 2025-12-13 17:47:25,708 | INFO     | . get job = 0 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,708 | INFO     | . initial setup = 10 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | . payload setup = 119 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | . stage-in = 0 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | . payload execution = 20463 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | . stage-out = 1 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | . log creation = 0 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,709 | INFO     | ..............................
[2025-12-13 18:47:58] 2025-12-13 17:47:25,838 | INFO     | 
[2025-12-13 18:47:58] 2025-12-13 17:47:25,838 | INFO     | job summary report
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | --------------------------------------------------
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | PanDA job id: 6929021245
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | task id: 47898782
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | errors: (none)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | pilot state: finished 
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | transexitcode: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | exeerrorcode: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | exeerrordiag: 
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | exitcode: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,839 | INFO     | exitmsg: OK
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | cpuconsumptiontime: 75329 s
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | nevents: 400
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | neventsw: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | pid: 29431
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | pgrp: 29431
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | corecount: 8
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | event service: False
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | sizes: {0: 2283145, 1: 2284002, 2: 2284030, 12: 2284030, 23: 2284058, 34: 2284086, 45: 2284242, 55: 2284270, 66: 2284298, 77: 2284326, 88: 2284382, 92: 2284952, 98
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | --------------------------------------------------
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | 
[2025-12-13 18:47:58] 2025-12-13 17:47:25,840 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-13 18:47:58] 2025-12-13 17:47:25,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,874 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 18:47:58] 2025-12-13 17:47:25,875 | INFO     | job 6929021245 has completed (purged errors)
[2025-12-13 18:47:58] 2025-12-13 17:47:25,875 | INFO     | overall cleanup function is called
[2025-12-13 18:47:58] 2025-12-13 17:47:26,884 | INFO     | --- collectZombieJob: --- 10, [29431]
[2025-12-13 18:47:58] 2025-12-13 17:47:26,884 | INFO     | zombie collector waiting for pid 29431
[2025-12-13 18:47:58] 2025-12-13 17:47:26,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 18:47:58] 2025-12-13 17:47:26,885 | INFO     | collected zombie processes
[2025-12-13 18:47:58] 2025-12-13 17:47:26,885 | INFO     | will attempt to kill all subprocesses of pid=29431
[2025-12-13 18:47:58] 2025-12-13 17:47:27,001 | INFO     | process IDs to be killed: [29431] (in reverse order)
[2025-12-13 18:47:58] 2025-12-13 17:47:27,073 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 18:47:58] 2025-12-13 17:47:27,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 18:47:58] 2025-12-13 17:47:27,077 | INFO     | did not find any defunct processes belonging to 29431
[2025-12-13 18:47:58] 2025-12-13 17:47:27,080 | INFO     | did not find any defunct processes belonging to 29431
[2025-12-13 18:47:58] 2025-12-13 17:47:27,081 | INFO     | ready for new job
[2025-12-13 18:47:58] 2025-12-13 17:47:27,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 18:47:58] 2025-12-13 17:47:27,083 | INFO     | ***************************************
[2025-12-13 18:47:58] 2025-12-13 17:47:27,084 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 18:47:58] 2025-12-13 17:47:27,084 | INFO     | ***************************************
[2025-12-13 18:47:58] 2025-12-13 17:47:27,084 | INFO     | 
[2025-12-13 18:47:58] 2025-12-13 17:47:27,084 | INFO     | pilot is running in a VM
[2025-12-13 18:47:58] 2025-12-13 17:47:27,084 | INFO     | architecture information:
[2025-12-13 18:47:58] 2025-12-13 17:47:27,085 | INFO     | executing command: cat /etc/os-release
[2025-12-13 18:47:58] 2025-12-13 17:47:27,110 | INFO     | cat /etc/os-release:
[2025-12-13 18:47:58] NAME="CentOS Linux"
[2025-12-13 18:47:58] VERSION="7 (Core)"
[2025-12-13 18:47:58] ID="centos"
[2025-12-13 18:47:58] ID_LIKE="rhel fedora"
[2025-12-13 18:47:58] VERSION_ID="7"
[2025-12-13 18:47:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 18:47:58] ANSI_COLOR="0;31"
[2025-12-13 18:47:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 18:47:58] HOME_URL="https://www.centos.org/"
[2025-12-13 18:47:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 18:47:58] 
[2025-12-13 18:47:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 18:47:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 18:47:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 18:47:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 18:47:58] 
[2025-12-13 18:47:58] 2025-12-13 17:47:27,110 | INFO     | ***************************************
[2025-12-13 18:47:58] 2025-12-13 17:47:27,613 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-13 18:47:58] 2025-12-13 17:47:27,644 | INFO     | sufficient remaining disk space (496697868288 B)
[2025-12-13 18:47:58] 2025-12-13 17:47:27,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 18:47:58] 2025-12-13 17:47:27,645 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 18:47:58] 2025-12-13 17:47:27,645 | INFO     | update_server=False
[2025-12-13 18:47:58] 2025-12-13 17:47:27,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 18:47:58] 2025-12-13 17:47:27,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:47:58] 2025-12-13 17:47:27,646 | INFO     | aborting loop
[2025-12-13 18:47:58] 2025-12-13 17:47:27,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 18:47:58] 2025-12-13 17:47:27,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 18:47:58] 2025-12-13 17:47:28,467 | INFO     | all payload control threads have been joined
[2025-12-13 18:47:58] 2025-12-13 17:47:28,646 | INFO     | [job] retrieve thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:28,650 | INFO     | [job] job monitor thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:28,657 | INFO     | [job] queue monitor thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:28,717 | INFO     | all data control threads have been joined
[2025-12-13 18:47:58] 2025-12-13 17:47:28,854 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:28,906 | INFO     | [job] validate thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:28,957 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,099 | INFO     | all job control threads have been joined
[2025-12-13 18:47:58] 2025-12-13 17:47:29,103 | INFO     | [payload] failed_post thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,435 | INFO     | [payload] validate_post thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,473 | INFO     | [payload] control thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,503 | INFO     | [data] copytool_in thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 18:47:58] 2025-12-13 17:47:29,654 | INFO     | [data] copytool_out thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:29,722 | INFO     | [data] control thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:30,022 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:30,104 | INFO     | [job] control thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:33,537 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:37,678 | INFO     | [monitor] cgroup control has ended
[2025-12-13 18:47:58] 2025-12-13 17:47:38,009 | INFO     | job.realtimelogging is not enabled
[2025-12-13 18:47:58] 2025-12-13 17:47:39,015 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 18:47:58] 2025-12-13 17:47:39,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274236192576)>', '<ExcThread(monitor, started 140273480881920)>']
[2025-12-13 18:47:58] 2025-12-13 17:47:44,918 | INFO     | all workflow threads have been joined
[2025-12-13 18:47:58] 2025-12-13 17:47:44,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 18:47:58] 2025-12-13 17:47:44,919 | INFO     | traces error code: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:44,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 18:47:58] 2025-12-13 17:47:57,839 | INFO     | PID=22850 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 18:47:58] 2025-12-13 17:47:57,840 | INFO     | .. there are 9 such processes running
[2025-12-13 18:47:58] 2025-12-13 17:47:57,840 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 18:47:58] 2025-12-13 17:47:57,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 18:47:58] 2025-12-13 17:47:57,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 18:47:58] 2025-12-13 17:47:57,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 18:47:58] 2025-12-13 17:47:57,841 | INFO     | [monitor] control thread has ended
[2025-12-13 18:47:58] 2025-12-13 17:47:58,059 [wrapper] ==== pilot stdout END ====
[2025-12-13 18:47:58] 2025-12-13 17:47:58,065 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 18:47:58] 2025-12-13 17:47:58,072 [wrapper] pilotpid: 22850
[2025-12-13 18:47:58] 2025-12-13 17:47:58,079 [wrapper] Pilot exit status: 0
[2025-12-13 18:47:58] 2025-12-13 17:47:58,122 [wrapper] pandaids: 6929021245
[2025-12-13 18:47:58] 2025-12-13 17:47:58,178 [wrapper] cleanup supervisor_pilot 15965 22851
[2025-12-13 18:47:58] 2025-12-13 17:47:58,228 [wrapper] Test setup, not cleaning
[2025-12-13 18:47:58] 2025-12-13 17:47:58,297 [wrapper] apfmon messages muted
[2025-12-13 18:47:58] 2025-12-13 17:47:58,389 [wrapper] ==== wrapper stdout END ====
[2025-12-13 18:47:58] 2025-12-13 17:47:58,403 [wrapper] ==== wrapper stderr END ====
[2025-12-13 18:47:58]  *** Error codes and diagnostics ***
[2025-12-13 18:47:58]     "exeErrorCode": 0,
[2025-12-13 18:47:58]     "exeErrorDiag": "",
[2025-12-13 18:47:58]     "pilotErrorCode": 0,
[2025-12-13 18:47:58]     "pilotErrorDiag": "",
[2025-12-13 18:47:58]  *** Listing of results directory ***
[2025-12-13 18:47:58] total 418772
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc    579449 Dec 13 06:46 pilot3.tar.gz
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc      5112 Dec 13 07:02 queuedata.json
[2025-12-13 18:47:58] -rwx------. 1 boinc boinc     36322 Dec 13 07:03 runpilot2-wrapper.sh
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc       100 Dec 13 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 18:47:58] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 12:57 run_atlas
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc       105 Dec 13 12:57 job.xml
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc 218489843 Dec 13 12:57 EVNT.47898779._000052.pool.root.1
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc     15847 Dec 13 12:57 start_atlas.sh
[2025-12-13 18:47:58] drwxrwx--x. 2 boinc boinc        68 Dec 13 12:57 shared
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc    592379 Dec 13 12:57 input.tar.gz
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc      6393 Dec 13 12:57 init_data.xml
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc         0 Dec 13 12:57 boinc_lockfile
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc      2518 Dec 13 12:57 pandaJob.out
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc    991728 Dec 13 13:00 agis_schedconf.cvmfs.json
[2025-12-13 18:47:58] drwx------. 5 boinc boinc      4096 Dec 13 13:01 pilot3
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc 199774044 Dec 13 18:46 HITS.47898782._000800.pool.root.1
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc       531 Dec 13 18:46 boinc_task_state.xml
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc      1020 Dec 13 18:47 memory_monitor_summary.json
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc        95 Dec 13 18:47 pilot_heartbeat.json
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc   1516240 Dec 13 18:47 agis_ddmendpoints.agis.ALL.json
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc    560235 Dec 13 18:47 log.47898782._000800.job.log.tgz.1
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc      7774 Dec 13 18:47 heartbeat.json
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc      8192 Dec 13 18:47 boinc_mmap_file
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc        28 Dec 13 18:47 wrapper_checkpoint.txt
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc       820 Dec 13 18:47 pilotlog.txt
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc   2770799 Dec 13 18:47 log.47898782._000800.job.log.1
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc       357 Dec 13 18:47 output.list
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc       620 Dec 13 18:47 runtime_log
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc   3348480 Dec 13 18:47 result.tar.gz
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc      8833 Dec 13 18:47 runtime_log.err
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc       658 Dec 13 18:47 BgjLDmktXo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDsRKDm2wMdtm.diag
[2025-12-13 18:47:58] -rw-r--r--. 1 boinc boinc     20770 Dec 13 18:47 stderr.txt
[2025-12-13 18:47:58] HITS file was successfully produced:
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc 199774044 Dec 13 18:46 shared/HITS.pool.root.1
[2025-12-13 18:47:58]  *** Contents of shared directory: ***
[2025-12-13 18:47:58] total 412332
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc 218489843 Dec 13 12:57 ATLAS.root_0
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc     15847 Dec 13 12:57 start_atlas.sh
[2025-12-13 18:47:58] -rw-r--r--. 2 boinc boinc    592379 Dec 13 12:57 input.tar.gz
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc 199774044 Dec 13 18:46 HITS.pool.root.1
[2025-12-13 18:47:58] -rw-------. 1 boinc boinc   3348480 Dec 13 18:47 result.tar.gz
18:48:00 (19048): run_atlas exited; CPU time 75627.188586
18:48:00 (19048): called boinc_finish(0)

</stderr_txt>
]]>

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