Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:50:44 (3089): wrapper (7.7.26015): starting
00:50:44 (3089): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 00:50:44] Arguments: --nthreads 8
[2025-12-13 00:50:44] Threads: 8
[2025-12-13 00:50:44] Checking for CVMFS
[2025-12-13 00:50:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 00:50:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 00:50:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 00:50:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 00:50:45] 2.11.2.0 11495 141783 134460 153950 3 60 15494204 18432000 127 130560 0 97892726 99.977 5769990 26377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 00:50:45] CVMFS is ok
[2025-12-13 00:50:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 00:50:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 00:50:45] Further information can be found at the LHC@home message board.
[2025-12-13 00:50:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 00:50:45] Checking for apptainer binary...
[2025-12-13 00:50:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 00:50:45] Running /usr/bin/apptainer --version
[2025-12-13 00:50:45] apptainer version 1.3.2-1.el7
[2025-12-13 00:50:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 00:50:46] c-206-31.aglt2.org
[2025-12-13 00:50:46] apptainer works
[2025-12-13 00:50:46] Set ATHENA_PROC_NUMBER=8
[2025-12-13 00:50:46] Set ATHENA_CORE_NUMBER=8
[2025-12-13 00:50:46] Starting ATLAS job with PandaID=6928799492
[2025-12-13 00:50:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 04:10:35]  *** The last 200 lines of the pilot log: ***
[2025-12-13 04:10:35] 2025-12-13 09:10:02,039 | INFO     | monitor loop #858: job 0:6928799492 is in state 'finished'
[2025-12-13 04:10:35] 2025-12-13 09:10:02,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,637 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-13 04:10:35] 2025-12-13 09:10:02,643 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.125
[2025-12-13 04:10:35] 2025-12-13 09:10:02,647 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6928799492/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,648 | INFO     | extracted standard info from prmon json
[2025-12-13 04:10:35] 2025-12-13 09:10:02,648 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 04:10:35] 2025-12-13 09:10:02,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 04:10:35] 2025-12-13 09:10:02,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 04:10:35] 2025-12-13 09:10:02,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 04:10:35] 2025-12-13 09:10:02,655 | INFO     | fitting pss+swap vs Time
[2025-12-13 04:10:35] 2025-12-13 09:10:02,655 | INFO     | sum of square deviations: 2334722845.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,657 | INFO     | sum of deviations: 13806126065.500002
[2025-12-13 04:10:35] 2025-12-13 09:10:02,657 | INFO     | mean x: 1765611031.5
[2025-12-13 04:10:35] 2025-12-13 09:10:02,657 | INFO     | mean y: 2442253.1785714286
[2025-12-13 04:10:35] 2025-12-13 09:10:02,657 | INFO     | intersect: -10438303866.100737
[2025-12-13 04:10:35] 2025-12-13 09:10:02,658 | INFO     | chi2: 2.06324564661304
[2025-12-13 04:10:35] 2025-12-13 09:10:02,658 | INFO     | sum of square deviations: 2160561440.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,659 | INFO     | sum of deviations: 25948419730.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,660 | INFO     | mean x: 1765610879.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,660 | INFO     | mean y: 2452652.4188481676
[2025-12-13 04:10:35] 2025-12-13 09:10:02,660 | INFO     | intersect: -21202596794.42597
[2025-12-13 04:10:35] 2025-12-13 09:10:02,661 | INFO     | chi2: 1.2861348200826497
[2025-12-13 04:10:35] 2025-12-13 09:10:02,661 | INFO     | current chi2=1.2861348200826497 (change=37.66448400393194 %)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,661 | INFO     | sum of square deviations: 1995283922.5
[2025-12-13 04:10:35] 2025-12-13 09:10:02,663 | INFO     | sum of deviations: 25003383634.999996
[2025-12-13 04:10:35] 2025-12-13 09:10:02,663 | INFO     | mean x: 1765610726.5
[2025-12-13 04:10:35] 2025-12-13 09:10:02,663 | INFO     | mean y: 2451780.2473118277
[2025-12-13 04:10:35] 2025-12-13 09:10:02,663 | INFO     | intersect: -22122841691.489445
[2025-12-13 04:10:35] 2025-12-13 09:10:02,664 | INFO     | chi2: 1.286930257192268
[2025-12-13 04:10:35] 2025-12-13 09:10:02,664 | INFO     | current chi2=1.286930257192268 (change=-0.06184710165667262 %)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,664 | INFO     | right removable region: 185
[2025-12-13 04:10:35] 2025-12-13 09:10:02,665 | INFO     | sum of square deviations: 2160561440.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,666 | INFO     | sum of deviations: -13058558835.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,666 | INFO     | mean x: 1765611184.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,667 | INFO     | mean y: 2465511.6858638744
[2025-12-13 04:10:35] 2025-12-13 09:10:02,667 | INFO     | intersect: 10673922059.571867
[2025-12-13 04:10:35] 2025-12-13 09:10:02,667 | INFO     | chi2: 0.8213943141223291
[2025-12-13 04:10:35] 2025-12-13 09:10:02,667 | INFO     | current chi2=0.8213943141223291 (change=60.18921375306404 %)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,668 | INFO     | sum of square deviations: 1995283922.5
[2025-12-13 04:10:35] 2025-12-13 09:10:02,669 | INFO     | sum of deviations: -13863033362.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,670 | INFO     | mean x: 1765611336.5
[2025-12-13 04:10:35] 2025-12-13 09:10:02,670 | INFO     | mean y: 2466218.3333333335
[2025-12-13 04:10:35] 2025-12-13 09:10:02,670 | INFO     | intersect: 12269757397.40357
[2025-12-13 04:10:35] 2025-12-13 09:10:02,670 | INFO     | chi2: 0.8093061013053063
[2025-12-13 04:10:35] 2025-12-13 09:10:02,671 | INFO     | current chi2=0.8093061013053063 (change=1.4716698921807352 %)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,671 | INFO     | left removable region: 20
[2025-12-13 04:10:35] 2025-12-13 09:10:02,671 | INFO     | sum of square deviations: 1392881930.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,673 | INFO     | sum of deviations: 994838568.9999995
[2025-12-13 04:10:35] 2025-12-13 09:10:02,673 | INFO     | mean x: 1765611306.0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,673 | INFO     | mean y: 2474317.7393939393
[2025-12-13 04:10:35] 2025-12-13 09:10:02,673 | INFO     | intersect: -1258578889.4561796
[2025-12-13 04:10:35] 2025-12-13 09:10:02,674 | INFO     | chi2: 0.008133912718200605
[2025-12-13 04:10:35] 2025-12-13 09:10:02,674 | INFO     | current memory leak: 0.71 B/s (using 165 data points, chi2=0.01)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,674 | INFO     | could have reported an average CPU frequency of 2376 MHz (10 samples)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,675 | INFO     | ..............................
[2025-12-13 04:10:35] 2025-12-13 09:10:02,675 | INFO     | . Timing measurements:
[2025-12-13 04:10:35] 2025-12-13 09:10:02,675 | INFO     | . get job = 0 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,675 | INFO     | . initial setup = 2 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,675 | INFO     | . payload setup = 5 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,676 | INFO     | . stage-in = 0 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,676 | INFO     | . payload execution = 11907 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,676 | INFO     | . stage-out = 2 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,676 | INFO     | . log creation = 0 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,676 | INFO     | ..............................
[2025-12-13 04:10:35] 2025-12-13 09:10:02,810 | INFO     | 
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | job summary report
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | --------------------------------------------------
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | PanDA job id: 6928799492
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | task id: 47886831
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | errors: (none)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | pilot state: finished 
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | transexitcode: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | exeerrorcode: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,811 | INFO     | exeerrordiag: 
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | exitcode: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | exitmsg: OK
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | cpuconsumptiontime: 90778 s
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | nevents: 400
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | neventsw: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | pid: 5956
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | pgrp: 5956
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | corecount: 8
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | event service: False
[2025-12-13 04:10:35] 2025-12-13 09:10:02,812 | INFO     | sizes: {0: 2283982, 5: 2284244, 11: 2284300, 11916: 2313832, 11919: 2322830, 11922: 2322886, 11929: 2323208}
[2025-12-13 04:10:35] 2025-12-13 09:10:02,813 | INFO     | --------------------------------------------------
[2025-12-13 04:10:35] 2025-12-13 09:10:02,813 | INFO     | 
[2025-12-13 04:10:35] 2025-12-13 09:10:02,813 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-13 04:10:35] 2025-12-13 09:10:02,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | job 6928799492 has completed (purged errors)
[2025-12-13 04:10:35] 2025-12-13 09:10:02,830 | INFO     | overall cleanup function is called
[2025-12-13 04:10:35] 2025-12-13 09:10:03,839 | INFO     | --- collectZombieJob: --- 10, [5956]
[2025-12-13 04:10:35] 2025-12-13 09:10:03,839 | INFO     | zombie collector waiting for pid 5956
[2025-12-13 04:10:35] 2025-12-13 09:10:03,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 04:10:35] 2025-12-13 09:10:03,839 | INFO     | collected zombie processes
[2025-12-13 04:10:35] 2025-12-13 09:10:03,839 | INFO     | will attempt to kill all subprocesses of pid=5956
[2025-12-13 04:10:35] 2025-12-13 09:10:04,011 | INFO     | process IDs to be killed: [5956] (in reverse order)
[2025-12-13 04:10:35] 2025-12-13 09:10:04,070 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 04:10:35] 2025-12-13 09:10:04,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 04:10:35] 2025-12-13 09:10:04,076 | INFO     | did not find any defunct processes belonging to 5956
[2025-12-13 04:10:35] 2025-12-13 09:10:04,082 | INFO     | did not find any defunct processes belonging to 5956
[2025-12-13 04:10:35] 2025-12-13 09:10:04,082 | INFO     | ready for new job
[2025-12-13 04:10:35] 2025-12-13 09:10:04,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 04:10:35] 2025-12-13 09:10:04,085 | INFO     | ***************************************
[2025-12-13 04:10:35] 2025-12-13 09:10:04,085 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 04:10:35] 2025-12-13 09:10:04,085 | INFO     | ***************************************
[2025-12-13 04:10:35] 2025-12-13 09:10:04,085 | INFO     | 
[2025-12-13 04:10:35] 2025-12-13 09:10:04,086 | INFO     | architecture information:
[2025-12-13 04:10:35] 2025-12-13 09:10:04,087 | INFO     | executing command: cat /etc/os-release
[2025-12-13 04:10:35] 2025-12-13 09:10:04,101 | INFO     | cat /etc/os-release:
[2025-12-13 04:10:35] NAME="CentOS Linux"
[2025-12-13 04:10:35] VERSION="7 (Core)"
[2025-12-13 04:10:35] ID="centos"
[2025-12-13 04:10:35] ID_LIKE="rhel fedora"
[2025-12-13 04:10:35] VERSION_ID="7"
[2025-12-13 04:10:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 04:10:35] ANSI_COLOR="0;31"
[2025-12-13 04:10:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 04:10:35] HOME_URL="https://www.centos.org/"
[2025-12-13 04:10:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 04:10:35] 
[2025-12-13 04:10:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 04:10:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 04:10:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 04:10:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 04:10:35] 
[2025-12-13 04:10:35] 2025-12-13 09:10:04,101 | INFO     | ***************************************
[2025-12-13 04:10:35] 2025-12-13 09:10:04,604 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-13 04:10:35] 2025-12-13 09:10:04,634 | INFO     | sufficient remaining disk space (28272754688 B)
[2025-12-13 04:10:35] 2025-12-13 09:10:04,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 04:10:35] 2025-12-13 09:10:04,635 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 04:10:35] 2025-12-13 09:10:04,635 | INFO     | update_server=False
[2025-12-13 04:10:35] 2025-12-13 09:10:04,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 04:10:35] 2025-12-13 09:10:04,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:10:35] 2025-12-13 09:10:04,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 04:10:35] 2025-12-13 09:10:04,638 | INFO     | all payload control threads have been joined
[2025-12-13 04:10:35] 2025-12-13 09:10:05,014 | INFO     | all data control threads have been joined
[2025-12-13 04:10:35] 2025-12-13 09:10:05,233 | INFO     | all job control threads have been joined
[2025-12-13 04:10:35] 2025-12-13 09:10:05,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:10:35] 2025-12-13 09:10:05,551 | INFO     | aborting loop
[2025-12-13 04:10:35] 2025-12-13 09:10:05,641 | INFO     | [job] retrieve thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:05,641 | INFO     | [job] queue monitor thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:05,643 | INFO     | [payload] control thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:05,845 | INFO     | [payload] failed_post thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:05,963 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,020 | INFO     | [data] control thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,239 | INFO     | [job] control thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,552 | INFO     | [job] job monitor thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,642 | INFO     | [data] copytool_out thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 04:10:35] 2025-12-13 09:10:06,921 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,958 | INFO     | [job] validate thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,962 | INFO     | [data] copytool_in thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:06,963 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:07,028 | INFO     | [payload] validate_post thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:10,817 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 04:10:35] 2025-12-13 09:10:17,696 | INFO     | [monitor] cgroup control has ended
[2025-12-13 04:10:35] 2025-12-13 09:10:18,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290211473216)>', '<ExcThread(monitor, started 140289234679552)>']
[2025-12-13 04:10:35] 2025-12-13 09:10:23,501 | INFO     | all workflow threads have been joined
[2025-12-13 04:10:35] 2025-12-13 09:10:23,501 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 04:10:35] 2025-12-13 09:10:23,501 | INFO     | traces error code: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:23,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 04:10:35] 2025-12-13 09:10:35,020 | INFO     | PID=12383 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 04:10:35] 2025-12-13 09:10:35,021 | INFO     | .. there are 3 such processes running
[2025-12-13 04:10:35] 2025-12-13 09:10:35,022 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 04:10:35] 2025-12-13 09:10:35,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 04:10:35] 2025-12-13 09:10:35,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 04:10:35] 2025-12-13 09:10:35,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 04:10:35] 2025-12-13 09:10:35,022 | INFO     | [monitor] control thread has ended
[2025-12-13 04:10:35] 2025-12-13 09:10:35,154 [wrapper] ==== pilot stdout END ====
[2025-12-13 04:10:35] 2025-12-13 09:10:35,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 04:10:35] 2025-12-13 09:10:35,158 [wrapper] pilotpid: 12383
[2025-12-13 04:10:35] 2025-12-13 09:10:35,161 [wrapper] Pilot exit status: 0
[2025-12-13 04:10:35] 2025-12-13 09:10:35,169 [wrapper] pandaids: 6928799492
[2025-12-13 04:10:35] 2025-12-13 09:10:35,209 [wrapper] cleanup supervisor_pilot  2351 12384
[2025-12-13 04:10:35] 2025-12-13 09:10:35,211 [wrapper] Test setup, not cleaning
[2025-12-13 04:10:35] 2025-12-13 09:10:35,213 [wrapper] apfmon messages muted
[2025-12-13 04:10:35] 2025-12-13 09:10:35,215 [wrapper] ==== wrapper stdout END ====
[2025-12-13 04:10:35] 2025-12-13 09:10:35,217 [wrapper] ==== wrapper stderr END ====
[2025-12-13 04:10:35]  *** Error codes and diagnostics ***
[2025-12-13 04:10:35]     "exeErrorCode": 0,
[2025-12-13 04:10:35]     "exeErrorDiag": "",
[2025-12-13 04:10:35]     "pilotErrorCode": 0,
[2025-12-13 04:10:35]     "pilotErrorDiag": "",
[2025-12-13 04:10:35]  *** Listing of results directory ***
[2025-12-13 04:10:35] total 340740
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas    579449 Dec 12 19:42 pilot3.tar.gz
[2025-12-13 04:10:35] -rwx------ 1 boincer umatlas     36322 Dec 12 19:49 runpilot2-wrapper.sh
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas      5112 Dec 12 19:49 queuedata.json
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas       100 Dec 13 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 04:10:35] -rwxr-xr-x 1 boincer umatlas      7986 Dec 13 00:50 run_atlas
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas       105 Dec 13 00:50 job.xml
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas 193749236 Dec 13 00:50 EVNT.47886829._000025.pool.root.1
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 00:50 start_atlas.sh
[2025-12-13 04:10:35] drwxrwx--x 2 boincer umatlas      4096 Dec 13 00:50 shared
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas    592405 Dec 13 00:50 input.tar.gz
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas         0 Dec 13 00:50 boinc_lockfile
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas      2533 Dec 13 00:50 pandaJob.out
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas        57 Dec 13 00:50 setup.sh.local
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas    991736 Dec 13 00:50 agis_schedconf.cvmfs.json
[2025-12-13 04:10:35] drwx------ 5 boincer umatlas      4096 Dec 13 00:50 pilot3
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas      5953 Dec 13 04:03 init_data.xml
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas 147054251 Dec 13 04:09 HITS.47886831._000516.pool.root.1
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas       531 Dec 13 04:09 boinc_task_state.xml
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas      1047 Dec 13 04:09 memory_monitor_summary.json
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas   1516240 Dec 13 04:09 agis_ddmendpoints.agis.ALL.json
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas    432928 Dec 13 04:09 log.47886831._000516.job.log.tgz.1
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas      7844 Dec 13 04:10 heartbeat.json
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas        28 Dec 13 04:10 wrapper_checkpoint.txt
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 04:10 boinc_mmap_file
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas        95 Dec 13 04:10 pilot_heartbeat.json
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas       820 Dec 13 04:10 pilotlog.txt
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas   1665490 Dec 13 04:10 log.47886831._000516.job.log.1
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas       357 Dec 13 04:10 output.list
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas       620 Dec 13 04:10 runtime_log
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas   2119680 Dec 13 04:10 result.tar.gz
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas      9343 Dec 13 04:10 runtime_log.err
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas       661 Dec 13 04:10 O8bLDmxzSo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLERKDmsLzOzm.diag
[2025-12-13 04:10:35] -rw-r--r-- 1 boincer umatlas     21061 Dec 13 04:10 stderr.txt
[2025-12-13 04:10:35] HITS file was successfully produced:
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas 147054251 Dec 13 04:09 shared/HITS.pool.root.1
[2025-12-13 04:10:35]  *** Contents of shared directory: ***
[2025-12-13 04:10:35] total 335492
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas 193749236 Dec 13 00:50 ATLAS.root_0
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas     15847 Dec 13 00:50 start_atlas.sh
[2025-12-13 04:10:35] -rw-r--r-- 2 boincer umatlas    592405 Dec 13 00:50 input.tar.gz
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas 147054251 Dec 13 04:09 HITS.pool.root.1
[2025-12-13 04:10:35] -rw------- 1 boincer umatlas   2119680 Dec 13 04:10 result.tar.gz
04:10:37 (3089): run_atlas exited; CPU time 90935.698607
04:10:37 (3089): called boinc_finish(0)

</stderr_txt>
]]>

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