Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:07 (301570): wrapper (7.7.26015): starting
00:12:07 (301570): wrapper: running run_atlas (--nthreads 8)
[2025-12-14 00:12:07] Arguments: --nthreads 8
[2025-12-14 00:12:07] Threads: 8
[2025-12-14 00:12:07] Checking for CVMFS
[2025-12-14 00:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 00:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 00:12:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 00:12:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 00:12:13] 2.13.3.0 8702 55396 392020 153984 1 525 13168026 21042176 24450 16776704 0 225854606 99.386 330569572 32118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 00:12:13] CVMFS is ok
[2025-12-14 00:12:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 00:12:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 00:12:13] Further information can be found at the LHC@home message board.
[2025-12-14 00:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 00:12:13] Checking for apptainer binary...
[2025-12-14 00:12:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 00:12:13] Running /usr/bin/apptainer --version
[2025-12-14 00:12:14] apptainer version 1.4.5-2.el9
[2025-12-14 00:12:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 00:12:16] c-16-12.aglt2.org
[2025-12-14 00:12:16] apptainer works
[2025-12-14 00:12:16] Set ATHENA_PROC_NUMBER=8
[2025-12-14 00:12:16] Set ATHENA_CORE_NUMBER=8
[2025-12-14 00:12:16] Starting ATLAS job with PandaID=6928966167
[2025-12-14 00:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 15:33:57]  *** The last 200 lines of the pilot log: ***
[2025-12-14 15:33:57] 2025-12-14 20:33:13,836 | INFO     | right removable region: 892
[2025-12-14 15:33:57] 2025-12-14 20:33:13,838 | INFO     | sum of square deviations: 220796462090.59122
[2025-12-14 15:33:57] 2025-12-14 20:33:13,860 | INFO     | sum of deviations: 805107756177.0875
[2025-12-14 15:33:57] 2025-12-14 20:33:13,860 | INFO     | mean x: 1765717115.1511757
[2025-12-14 15:33:57] 2025-12-14 20:33:13,860 | INFO     | mean y: 2493947.39193729
[2025-12-14 15:33:57] 2025-12-14 20:33:13,861 | INFO     | intersect: -6435981249.006699
[2025-12-14 15:33:57] 2025-12-14 20:33:13,862 | INFO     | chi2: 4.176720266982414
[2025-12-14 15:33:57] 2025-12-14 20:33:13,862 | INFO     | current chi2=4.176720266982414 (change=49.02021240036221 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:13,864 | INFO     | sum of square deviations: 217107962885.1714
[2025-12-14 15:33:57] 2025-12-14 20:33:13,886 | INFO     | sum of deviations: 585736986227.3794
[2025-12-14 15:33:57] 2025-12-14 20:33:13,886 | INFO     | mean x: 1765717267.6531532
[2025-12-14 15:33:57] 2025-12-14 20:33:13,886 | INFO     | mean y: 2503015.114864865
[2025-12-14 15:33:57] 2025-12-14 20:33:13,886 | INFO     | intersect: -4761237094.37073
[2025-12-14 15:33:57] 2025-12-14 20:33:13,888 | INFO     | chi2: 2.0748862768712764
[2025-12-14 15:33:57] 2025-12-14 20:33:13,888 | INFO     | current chi2=2.0748862768712764 (change=50.32259418296321 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:13,889 | INFO     | sum of square deviations: 213460928795.6654
[2025-12-14 15:33:57] 2025-12-14 20:33:13,948 | INFO     | sum of deviations: 409799810289.9197
[2025-12-14 15:33:57] 2025-12-14 20:33:13,949 | INFO     | mean x: 1765717420.1517553
[2025-12-14 15:33:57] 2025-12-14 20:33:13,949 | INFO     | mean y: 2510369.664779162
[2025-12-14 15:33:57] 2025-12-14 20:33:13,949 | INFO     | intersect: -3387293412.6304336
[2025-12-14 15:33:57] 2025-12-14 20:33:13,950 | INFO     | chi2: 0.7455693796862948
[2025-12-14 15:33:57] 2025-12-14 20:33:13,955 | INFO     | current chi2=0.7455693796862948 (change=64.06697620023108 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:13,957 | INFO     | sum of square deviations: 209854911871.3536
[2025-12-14 15:33:57] 2025-12-14 20:33:14,006 | INFO     | sum of deviations: 315362860861.25745
[2025-12-14 15:33:57] 2025-12-14 20:33:14,006 | INFO     | mean x: 1765717572.6514807
[2025-12-14 15:33:57] 2025-12-14 20:33:14,007 | INFO     | mean y: 2514358.994305239
[2025-12-14 15:33:57] 2025-12-14 20:33:14,007 | INFO     | intersect: -2650946263.960874
[2025-12-14 15:33:57] 2025-12-14 20:33:14,008 | INFO     | chi2: 0.3339380660672668
[2025-12-14 15:33:57] 2025-12-14 20:33:14,008 | INFO     | current chi2=0.3339380660672668 (change=55.210329827684944 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,010 | INFO     | sum of square deviations: 206289624951.43195
[2025-12-14 15:33:57] 2025-12-14 20:33:14,033 | INFO     | sum of deviations: 263656182673.83893
[2025-12-14 15:33:57] 2025-12-14 20:33:14,033 | INFO     | mean x: 1765717725.1534936
[2025-12-14 15:33:57] 2025-12-14 20:33:14,033 | INFO     | mean y: 2516570.725085911
[2025-12-14 15:33:57] 2025-12-14 20:33:14,034 | INFO     | intersect: -2254225110.7972417
[2025-12-14 15:33:57] 2025-12-14 20:33:14,035 | INFO     | chi2: 0.23251140667120646
[2025-12-14 15:33:57] 2025-12-14 20:33:14,035 | INFO     | current chi2=0.23251140667120646 (change=30.372895366660437 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,036 | INFO     | sum of square deviations: 202765370662.41812
[2025-12-14 15:33:57] 2025-12-14 20:33:14,059 | INFO     | sum of deviations: 227086576684.91833
[2025-12-14 15:33:57] 2025-12-14 20:33:14,059 | INFO     | mean x: 1765717877.6463134
[2025-12-14 15:33:57] 2025-12-14 20:33:14,060 | INFO     | mean y: 2518152.146313364
[2025-12-14 15:33:57] 2025-12-14 20:33:14,060 | INFO     | intersect: -1974993229.1912465
[2025-12-14 15:33:57] 2025-12-14 20:33:14,061 | INFO     | chi2: 0.18118114340205121
[2025-12-14 15:33:57] 2025-12-14 20:33:14,061 | INFO     | current chi2=0.18118114340205121 (change=22.07644949726754 %)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,062 | INFO     | left removable region: 60
[2025-12-14 15:33:57] 2025-12-14 20:33:14,063 | INFO     | sum of square deviations: 178568280239.31613
[2025-12-14 15:33:57] 2025-12-14 20:33:14,081 | INFO     | sum of deviations: 147068675567.19592
[2025-12-14 15:33:57] 2025-12-14 20:33:14,082 | INFO     | mean x: 1765718609.6021636
[2025-12-14 15:33:57] 2025-12-14 20:33:14,082 | INFO     | mean y: 2521496.780048077
[2025-12-14 15:33:57] 2025-12-14 20:33:14,082 | INFO     | intersect: -1451722767.6017153
[2025-12-14 15:33:57] 2025-12-14 20:33:14,083 | INFO     | chi2: 0.025024647027115404
[2025-12-14 15:33:57] 2025-12-14 20:33:14,084 | INFO     | current memory leak: 0.82 B/s (using 832 data points, chi2=0.03)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,085 | INFO     | could have reported an average CPU frequency of 2899 MHz (33 samples)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,085 | INFO     | ..............................
[2025-12-14 15:33:57] 2025-12-14 20:33:14,085 | INFO     | . Timing measurements:
[2025-12-14 15:33:57] 2025-12-14 20:33:14,085 | INFO     | . get job = 0 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,085 | INFO     | . initial setup = 13 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | . payload setup = 97 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | . stage-in = 1 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | . payload execution = 54833 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | . stage-out = 3 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | . log creation = 0 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,086 | INFO     | ..............................
[2025-12-14 15:33:57] 2025-12-14 20:33:14,488 | INFO     | 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,491 | INFO     | job summary report
[2025-12-14 15:33:57] 2025-12-14 20:33:14,491 | INFO     | --------------------------------------------------
[2025-12-14 15:33:57] 2025-12-14 20:33:14,491 | INFO     | PanDA job id: 6928966167
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | task id: 47898782
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | errors: (none)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | pilot state: finished 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | transexitcode: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:14,492 | INFO     | exeerrorcode: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | exeerrordiag: 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | exitcode: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | exitmsg: OK
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | cpuconsumptiontime: 107757 s
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | nevents: 400
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | neventsw: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:14,493 | INFO     | pid: 348040
[2025-12-14 15:33:57] 2025-12-14 20:33:14,494 | INFO     | pgrp: 348040
[2025-12-14 15:33:57] 2025-12-14 20:33:14,494 | INFO     | corecount: 8
[2025-12-14 15:33:57] 2025-12-14 20:33:14,494 | INFO     | event service: False
[2025-12-14 15:33:57] 2025-12-14 20:33:14,494 | INFO     | sizes: {0: 2283144, 3: 2283745, 4: 2283829, 7: 2283857, 8: 2283857, 11: 2284056, 14: 2284212, 17: 2284240, 28: 2284268, 40: 2284296, 52: 2284324, 64: 2284632, 76: 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,494 | INFO     | --------------------------------------------------
[2025-12-14 15:33:57] 2025-12-14 20:33:14,496 | INFO     | 
[2025-12-14 15:33:57] 2025-12-14 20:33:14,496 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-14 15:33:57] 2025-12-14 20:33:14,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 15:33:57] 2025-12-14 20:33:14,531 | INFO     | job 6928966167 has completed (purged errors)
[2025-12-14 15:33:57] 2025-12-14 20:33:14,531 | INFO     | overall cleanup function is called
[2025-12-14 15:33:57] 2025-12-14 20:33:15,061 | INFO     | PID=320860 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 15:33:57] 2025-12-14 20:33:15,061 | INFO     | .. there are 11 such processes running
[2025-12-14 15:33:57] 2025-12-14 20:33:15,541 | INFO     | --- collectZombieJob: --- 10, [348040]
[2025-12-14 15:33:57] 2025-12-14 20:33:15,541 | INFO     | zombie collector waiting for pid 348040
[2025-12-14 15:33:57] 2025-12-14 20:33:15,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 15:33:57] 2025-12-14 20:33:15,542 | INFO     | collected zombie processes
[2025-12-14 15:33:57] 2025-12-14 20:33:15,542 | INFO     | will attempt to kill all subprocesses of pid=348040
[2025-12-14 15:33:57] 2025-12-14 20:33:16,471 | INFO     | process IDs to be killed: [348040] (in reverse order)
[2025-12-14 15:33:57] 2025-12-14 20:33:16,592 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 15:33:57] 2025-12-14 20:33:16,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 15:33:57] 2025-12-14 20:33:16,621 | INFO     | did not find any defunct processes belonging to 348040
[2025-12-14 15:33:57] 2025-12-14 20:33:16,641 | INFO     | did not find any defunct processes belonging to 348040
[2025-12-14 15:33:57] 2025-12-14 20:33:16,641 | INFO     | ready for new job
[2025-12-14 15:33:57] 2025-12-14 20:33:16,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 15:33:57] 2025-12-14 20:33:16,647 | INFO     | ***************************************
[2025-12-14 15:33:57] 2025-12-14 20:33:16,647 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 15:33:57] 2025-12-14 20:33:16,647 | INFO     | ***************************************
[2025-12-14 15:33:57] 2025-12-14 20:33:16,647 | INFO     | 
[2025-12-14 15:33:57] 2025-12-14 20:33:16,650 | INFO     | architecture information:
[2025-12-14 15:33:57] 2025-12-14 20:33:16,650 | INFO     | executing command: cat /etc/os-release
[2025-12-14 15:33:57] 2025-12-14 20:33:16,672 | INFO     | cat /etc/os-release:
[2025-12-14 15:33:57] NAME="CentOS Linux"
[2025-12-14 15:33:57] VERSION="7 (Core)"
[2025-12-14 15:33:57] ID="centos"
[2025-12-14 15:33:57] ID_LIKE="rhel fedora"
[2025-12-14 15:33:57] VERSION_ID="7"
[2025-12-14 15:33:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 15:33:57] ANSI_COLOR="0;31"
[2025-12-14 15:33:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 15:33:57] HOME_URL="https://www.centos.org/"
[2025-12-14 15:33:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 15:33:57] 
[2025-12-14 15:33:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 15:33:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 15:33:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 15:33:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 15:33:57] 
[2025-12-14 15:33:57] 2025-12-14 20:33:16,673 | INFO     | ***************************************
[2025-12-14 15:33:57] 2025-12-14 20:33:17,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-14 15:33:57] 2025-12-14 20:33:17,246 | INFO     | sufficient remaining disk space (53043265536 B)
[2025-12-14 15:33:57] 2025-12-14 20:33:17,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 15:33:57] 2025-12-14 20:33:17,246 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 15:33:57] 2025-12-14 20:33:17,247 | INFO     | update_server=False
[2025-12-14 15:33:57] 2025-12-14 20:33:17,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 15:33:57] 2025-12-14 20:33:17,262 | INFO     | all job control threads have been joined
[2025-12-14 15:33:57] 2025-12-14 20:33:17,406 | INFO     | all payload control threads have been joined
[2025-12-14 15:33:57] 2025-12-14 20:33:17,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:33:57] 2025-12-14 20:33:17,474 | INFO     | aborting loop
[2025-12-14 15:33:57] 2025-12-14 20:33:17,492 | INFO     | all data control threads have been joined
[2025-12-14 15:33:57] 2025-12-14 20:33:17,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 15:33:57] 2025-12-14 20:33:17,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 15:33:57] 2025-12-14 20:33:18,253 | INFO     | [job] retrieve thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,268 | INFO     | [job] control thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,374 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,412 | INFO     | [payload] control thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,419 | INFO     | [job] validate thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,480 | INFO     | [job] job monitor thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,498 | INFO     | [data] control thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,514 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:18,576 | INFO     | [payload] validate_post thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:19,128 | INFO     | [data] copytool_in thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:19,275 | INFO     | [payload] failed_post thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:19,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 15:33:57] 2025-12-14 20:33:19,549 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:19,956 | INFO     | [data] copytool_out thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:20,312 | INFO     | [job] queue monitor thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:21,677 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:27,783 | INFO     | job.realtimelogging is not enabled
[2025-12-14 15:33:57] 2025-12-14 20:33:28,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 15:33:57] 2025-12-14 20:33:47,738 | INFO     | PID=320860 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-14 15:33:57] 2025-12-14 20:33:47,740 | INFO     | .. there are 11 such processes running
[2025-12-14 15:33:57] 2025-12-14 20:33:47,741 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 15:33:57] 2025-12-14 20:33:47,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 15:33:57] 2025-12-14 20:33:47,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 15:33:57] 2025-12-14 20:33:51,451 | INFO     | [monitor] cgroup control has ended
[2025-12-14 15:33:57] 2025-12-14 20:33:51,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592589330240)>', '<ExcThread(monitor, started 140592080197376)>']
[2025-12-14 15:33:57] 2025-12-14 20:33:51,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 15:33:57] 2025-12-14 20:33:51,770 | INFO     | [monitor] control thread has ended
[2025-12-14 15:33:57] 2025-12-14 20:33:56,756 | INFO     | all workflow threads have been joined
[2025-12-14 15:33:57] 2025-12-14 20:33:56,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 15:33:57] 2025-12-14 20:33:56,757 | INFO     | traces error code: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:56,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 15:33:57] 2025-12-14 20:33:57,113 [wrapper] ==== pilot stdout END ====
[2025-12-14 15:33:57] 2025-12-14 20:33:57,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 15:33:57] 2025-12-14 20:33:57,179 [wrapper] pilotpid: 320860
[2025-12-14 15:33:57] 2025-12-14 20:33:57,210 [wrapper] Pilot exit status: 0
[2025-12-14 15:33:57] 2025-12-14 20:33:57,290 [wrapper] pandaids: 6928966167
[2025-12-14 15:33:57] 2025-12-14 20:33:57,402 [wrapper] cleanup supervisor_pilot 2740160 320861
[2025-12-14 15:33:57] 2025-12-14 20:33:57,419 [wrapper] Test setup, not cleaning
[2025-12-14 15:33:57] 2025-12-14 20:33:57,428 [wrapper] apfmon messages muted
[2025-12-14 15:33:57] 2025-12-14 20:33:57,432 [wrapper] ==== wrapper stdout END ====
[2025-12-14 15:33:57] 2025-12-14 20:33:57,435 [wrapper] ==== wrapper stderr END ====
[2025-12-14 15:33:57]  *** Error codes and diagnostics ***
[2025-12-14 15:33:57]     "exeErrorCode": 0,
[2025-12-14 15:33:57]     "exeErrorDiag": "",
[2025-12-14 15:33:57]     "pilotErrorCode": 0,
[2025-12-14 15:33:57]     "pilotErrorDiag": "",
[2025-12-14 15:33:57]  *** Listing of results directory ***
[2025-12-14 15:33:57] total 418472
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 23:45 pilot3.tar.gz
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas      5112 Dec 13 00:02 queuedata.json
[2025-12-14 15:33:57] -rwx------. 1 boincer umatlas     36322 Dec 13 00:02 runpilot2-wrapper.sh
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas       100 Dec 14 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 15:33:57] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 00:12 run_atlas
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas       105 Dec 14 00:12 job.xml
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas 212083532 Dec 14 00:12 EVNT.47898779._000043.pool.root.1
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:12 start_atlas.sh
[2025-12-14 15:33:57] drwxrwx--x. 2 boincer umatlas      4096 Dec 14 00:12 shared
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas    592386 Dec 14 00:12 input.tar.gz
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas         0 Dec 14 00:12 boinc_lockfile
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas      2518 Dec 14 00:12 pandaJob.out
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas        57 Dec 14 00:12 setup.sh.local
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas    991728 Dec 14 00:14 agis_schedconf.cvmfs.json
[2025-12-14 15:33:57] drwx------. 5 boincer umatlas      4096 Dec 14 00:15 pilot3
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas      6524 Dec 14 15:29 init_data.xml
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas 198845984 Dec 14 15:32 HITS.47898782._000552.pool.root.1
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas       532 Dec 14 15:32 boinc_task_state.xml
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas      1039 Dec 14 15:32 memory_monitor_summary.json
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas   1516240 Dec 14 15:33 agis_ddmendpoints.agis.ALL.json
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas    895631 Dec 14 15:33 log.47898782._000552.job.log.tgz.1
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas      7813 Dec 14 15:33 heartbeat.json
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas        29 Dec 14 15:33 wrapper_checkpoint.txt
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 15:33 boinc_mmap_file
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas        95 Dec 14 15:33 pilot_heartbeat.json
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas      4895 Dec 14 15:33 pilotlog.txt
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas   5931240 Dec 14 15:33 log.47898782._000552.job.log.1
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas       357 Dec 14 15:33 output.list
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas       620 Dec 14 15:33 runtime_log
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas   6850560 Dec 14 15:33 result.tar.gz
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas       658 Dec 14 15:33 qgMODmQxWo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvoNKDm97EZJn.diag
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas      9338 Dec 14 15:33 runtime_log.err
[2025-12-14 15:33:57] -rw-r--r--. 1 boincer umatlas     21193 Dec 14 15:33 stderr.txt
[2025-12-14 15:33:57] HITS file was successfully produced:
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas 198845984 Dec 14 15:32 shared/HITS.pool.root.1
[2025-12-14 15:33:57]  *** Contents of shared directory: ***
[2025-12-14 15:33:57] total 408600
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas 212083532 Dec 14 00:12 ATLAS.root_0
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 00:12 start_atlas.sh
[2025-12-14 15:33:57] -rw-r--r--. 2 boincer umatlas    592386 Dec 14 00:12 input.tar.gz
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas 198845984 Dec 14 15:32 HITS.pool.root.1
[2025-12-14 15:33:57] -rw-------. 1 boincer umatlas   6850560 Dec 14 15:33 result.tar.gz
15:33:59 (301570): run_atlas exited; CPU time 110262.681701
15:33:59 (301570): called boinc_finish(0)

</stderr_txt>
]]>

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