Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:15 (272591): wrapper (7.7.26015): starting
00:05:16 (272591): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 00:05:16] Arguments: --nthreads 9
[2025-12-13 00:05:16] Threads: 9
[2025-12-13 00:05:16] Checking for CVMFS
[2025-12-13 00:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 00:05:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 00:05:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 00:05:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 00:05:18] 2.13.3.0 11601 54087 332356 153948 1 423 22174218 32935937 18183 16776704 0 196254717 99.446 282275433 38837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-13 00:05:18] CVMFS is ok
[2025-12-13 00:05:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 00:05:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 00:05:18] Further information can be found at the LHC@home message board.
[2025-12-13 00:05:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 00:05:18] Checking for apptainer binary...
[2025-12-13 00:05:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 00:05:18] Running /usr/bin/apptainer --version
[2025-12-13 00:05:18] apptainer version 1.4.4-1.el9
[2025-12-13 00:05:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 00:05:19] c6-6-39-4.aglt2.org
[2025-12-13 00:05:19] apptainer works
[2025-12-13 00:05:19] Set ATHENA_PROC_NUMBER=9
[2025-12-13 00:05:19] Set ATHENA_CORE_NUMBER=9
[2025-12-13 00:05:19] Starting ATLAS job with PandaID=6928958925
[2025-12-13 00:05:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:57:00]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:57:00] 2025-12-13 11:56:22,275 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 06:57:00] 2025-12-13 11:56:22,313 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2896.0585178571423
[2025-12-13 06:57:00] 2025-12-13 11:56:22,359 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6928958925/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,360 | INFO     | extracted standard info from prmon json
[2025-12-13 06:57:00] 2025-12-13 11:56:22,360 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:57:00] 2025-12-13 11:56:22,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:57:00] 2025-12-13 11:56:22,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:57:00] 2025-12-13 11:56:22,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:57:00] 2025-12-13 11:56:22,402 | INFO     | fitting pss+swap vs Time
[2025-12-13 06:57:00] 2025-12-13 11:56:22,412 | INFO     | sum of square deviations: 19845068461.497555
[2025-12-13 06:57:00] 2025-12-13 11:56:22,444 | INFO     | sum of deviations: 261753292626.38284
[2025-12-13 06:57:00] 2025-12-13 11:56:22,445 | INFO     | mean x: 1765614756.2525
[2025-12-13 06:57:00] 2025-12-13 11:56:22,445 | INFO     | mean y: 2458558.8675
[2025-12-13 06:57:00] 2025-12-13 11:56:22,445 | INFO     | intersect: -23285718897.182705
[2025-12-13 06:57:00] 2025-12-13 11:56:22,445 | INFO     | chi2: 7.78403235747605
[2025-12-13 06:57:00] 2025-12-13 11:56:22,446 | INFO     | sum of square deviations: 19110201276.15195
[2025-12-13 06:57:00] 2025-12-13 11:56:22,565 | INFO     | sum of deviations: 340028555736.3799
[2025-12-13 06:57:00] 2025-12-13 11:56:22,565 | INFO     | mean x: 1765614603.7594936
[2025-12-13 06:57:00] 2025-12-13 11:56:22,565 | INFO     | mean y: 2474715.098734177
[2025-12-13 06:57:00] 2025-12-13 11:56:22,565 | INFO     | intersect: -31413174708.364075
[2025-12-13 06:57:00] 2025-12-13 11:56:22,566 | INFO     | chi2: 5.379219337542402
[2025-12-13 06:57:00] 2025-12-13 11:56:22,566 | INFO     | current chi2=5.379219337542402 (change=30.89418067004801 %)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,567 | INFO     | sum of square deviations: 18393658095.323288
[2025-12-13 06:57:00] 2025-12-13 11:56:22,588 | INFO     | sum of deviations: 335119570871.1842
[2025-12-13 06:57:00] 2025-12-13 11:56:22,588 | INFO     | mean x: 1765614451.2615385
[2025-12-13 06:57:00] 2025-12-13 11:56:22,588 | INFO     | mean y: 2473670.292307692
[2025-12-13 06:57:00] 2025-12-13 11:56:22,588 | INFO     | intersect: -32165785311.381916
[2025-12-13 06:57:00] 2025-12-13 11:56:22,589 | INFO     | chi2: 5.375641913446574
[2025-12-13 06:57:00] 2025-12-13 11:56:22,589 | INFO     | current chi2=5.375641913446574 (change=0.06650452177810143 %)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,589 | INFO     | right removable region: 389
[2025-12-13 06:57:00] 2025-12-13 11:56:22,590 | INFO     | sum of square deviations: 19110041943.630295
[2025-12-13 06:57:00] 2025-12-13 11:56:22,617 | INFO     | sum of deviations: 138176094318.01263
[2025-12-13 06:57:00] 2025-12-13 11:56:22,617 | INFO     | mean x: 1765614908.7620254
[2025-12-13 06:57:00] 2025-12-13 11:56:22,617 | INFO     | mean y: 2484176.734177215
[2025-12-13 06:57:00] 2025-12-13 11:56:22,617 | INFO     | intersect: -12763880904.09752
[2025-12-13 06:57:00] 2025-12-13 11:56:22,618 | INFO     | chi2: 4.256348318119874
[2025-12-13 06:57:00] 2025-12-13 11:56:22,618 | INFO     | current chi2=4.256348318119874 (change=45.31949351377077 %)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,642 | INFO     | sum of square deviations: 18393532678.358913
[2025-12-13 06:57:00] 2025-12-13 11:56:22,645 | INFO     | sum of deviations: 70313529765.0257
[2025-12-13 06:57:00] 2025-12-13 11:56:22,745 | INFO     | mean x: 1765615061.2564104
[2025-12-13 06:57:00] 2025-12-13 11:56:22,746 | INFO     | mean y: 2498591.38974359
[2025-12-13 06:57:00] 2025-12-13 11:56:22,746 | INFO     | intersect: -6746973048.133651
[2025-12-13 06:57:00] 2025-12-13 11:56:22,746 | INFO     | chi2: 3.199235504597715
[2025-12-13 06:57:00] 2025-12-13 11:56:22,746 | INFO     | current chi2=3.199235504597715 (change=24.836144378078284 %)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,746 | INFO     | left removable region: 20
[2025-12-13 06:57:00] 2025-12-13 11:56:22,747 | INFO     | sum of square deviations: 15579391578.330624
[2025-12-13 06:57:00] 2025-12-13 11:56:22,773 | INFO     | sum of deviations: 80120860308.08675
[2025-12-13 06:57:00] 2025-12-13 11:56:22,773 | INFO     | mean x: 1765615030.7750678
[2025-12-13 06:57:00] 2025-12-13 11:56:22,773 | INFO     | mean y: 2530466.5311653116
[2025-12-13 06:57:00] 2025-12-13 11:56:22,773 | INFO     | intersect: -9077579916.941563
[2025-12-13 06:57:00] 2025-12-13 11:56:22,774 | INFO     | chi2: 0.2516946445716107
[2025-12-13 06:57:00] 2025-12-13 11:56:22,774 | INFO     | current memory leak: 5.14 B/s (using 369 data points, chi2=0.25)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | could have reported an average CPU frequency of 2979 MHz (17 samples)
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | ..............................
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | . Timing measurements:
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | . get job = 1 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | . initial setup = 5 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | . payload setup = 45 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,775 | INFO     | . stage-in = 0 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,776 | INFO     | . payload execution = 24375 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,776 | INFO     | . stage-out = 7 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,776 | INFO     | . log creation = 0 s
[2025-12-13 06:57:00] 2025-12-13 11:56:22,776 | INFO     | ..............................
[2025-12-13 06:57:00] 2025-12-13 11:56:23,199 | INFO     | 
[2025-12-13 06:57:00] 2025-12-13 11:56:23,199 | INFO     | job summary report
[2025-12-13 06:57:00] 2025-12-13 11:56:23,199 | INFO     | --------------------------------------------------
[2025-12-13 06:57:00] 2025-12-13 11:56:23,199 | INFO     | PanDA job id: 6928958925
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | task id: 47886831
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | errors: (none)
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | pilot state: finished 
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | transexitcode: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | exeerrorcode: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | exeerrordiag: 
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | exitcode: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | exitmsg: OK
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | cpuconsumptiontime: 46667 s
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | nevents: 400
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | neventsw: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | pid: 317524
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | pgrp: 317524
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | corecount: 9
[2025-12-13 06:57:00] 2025-12-13 11:56:23,200 | INFO     | event service: False
[2025-12-13 06:57:00] 2025-12-13 11:56:23,201 | INFO     | sizes: {0: 2283818, 1: 2283818, 2: 2283818, 3: 2284017, 4: 2284073, 15: 2284073, 26: 2284229, 37: 2284257, 41: 2284547, 49: 2284575, 24427: 2319388, 24428: 2319667
[2025-12-13 06:57:00] 2025-12-13 11:56:23,201 | INFO     | --------------------------------------------------
[2025-12-13 06:57:00] 2025-12-13 11:56:23,201 | INFO     | 
[2025-12-13 06:57:00] 2025-12-13 11:56:23,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | job 6928958925 has completed (purged errors)
[2025-12-13 06:57:00] 2025-12-13 11:56:23,296 | INFO     | overall cleanup function is called
[2025-12-13 06:57:00] 2025-12-13 11:56:24,289 | INFO     | PID=285481 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 06:57:00] 2025-12-13 11:56:24,293 | INFO     | .. there are 23 such processes running
[2025-12-13 06:57:00] 2025-12-13 11:56:24,331 | INFO     | --- collectZombieJob: --- 10, [317524]
[2025-12-13 06:57:00] 2025-12-13 11:56:24,331 | INFO     | zombie collector waiting for pid 317524
[2025-12-13 06:57:00] 2025-12-13 11:56:24,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:57:00] 2025-12-13 11:56:24,332 | INFO     | collected zombie processes
[2025-12-13 06:57:00] 2025-12-13 11:56:24,332 | INFO     | will attempt to kill all subprocesses of pid=317524
[2025-12-13 06:57:00] 2025-12-13 11:56:26,166 | INFO     | process IDs to be killed: [317524] (in reverse order)
[2025-12-13 06:57:00] 2025-12-13 11:56:27,048 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:57:00] 2025-12-13 11:56:27,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:57:00] 2025-12-13 11:56:27,246 | INFO     | did not find any defunct processes belonging to 317524
[2025-12-13 06:57:00] 2025-12-13 11:56:27,385 | INFO     | did not find any defunct processes belonging to 317524
[2025-12-13 06:57:00] 2025-12-13 11:56:27,385 | INFO     | ready for new job
[2025-12-13 06:57:00] 2025-12-13 11:56:27,385 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:57:00] 2025-12-13 11:56:27,388 | INFO     | ***************************************
[2025-12-13 06:57:00] 2025-12-13 11:56:27,388 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:57:00] 2025-12-13 11:56:27,388 | INFO     | ***************************************
[2025-12-13 06:57:00] 2025-12-13 11:56:27,388 | INFO     | 
[2025-12-13 06:57:00] 2025-12-13 11:56:27,392 | INFO     | architecture information:
[2025-12-13 06:57:00] 2025-12-13 11:56:27,393 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:57:00] 2025-12-13 11:56:27,486 | INFO     | cat /etc/os-release:
[2025-12-13 06:57:00] NAME="CentOS Linux"
[2025-12-13 06:57:00] VERSION="7 (Core)"
[2025-12-13 06:57:00] ID="centos"
[2025-12-13 06:57:00] ID_LIKE="rhel fedora"
[2025-12-13 06:57:00] VERSION_ID="7"
[2025-12-13 06:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:57:00] ANSI_COLOR="0;31"
[2025-12-13 06:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:57:00] HOME_URL="https://www.centos.org/"
[2025-12-13 06:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:57:00] 
[2025-12-13 06:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:57:00] 
[2025-12-13 06:57:00] 2025-12-13 11:56:27,486 | INFO     | ***************************************
[2025-12-13 06:57:00] 2025-12-13 11:56:27,990 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-12-13 06:57:00] 2025-12-13 11:56:28,155 | INFO     | sufficient remaining disk space (74864132096 B)
[2025-12-13 06:57:00] 2025-12-13 11:56:28,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:57:00] 2025-12-13 11:56:28,205 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:57:00] 2025-12-13 11:56:28,205 | INFO     | update_server=False
[2025-12-13 06:57:00] 2025-12-13 11:56:28,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:57:00] 2025-12-13 11:56:28,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:57:00] 2025-12-13 11:56:28,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:57:00] 2025-12-13 11:56:28,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:57:00] 2025-12-13 11:56:28,400 | INFO     | aborting loop
[2025-12-13 06:57:00] 2025-12-13 11:56:28,468 | INFO     | all data control threads have been joined
[2025-12-13 06:57:00] 2025-12-13 11:56:28,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:57:00] 2025-12-13 11:56:29,210 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:29,342 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:29,372 | INFO     | all payload control threads have been joined
[2025-12-13 06:57:00] 2025-12-13 11:56:29,406 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:29,474 | INFO     | [data] control thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:29,597 | INFO     | all job control threads have been joined
[2025-12-13 06:57:00] 2025-12-13 11:56:30,005 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,013 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,026 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,035 | INFO     | [job] validate thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,378 | INFO     | [payload] control thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,553 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,606 | INFO     | [job] control thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,618 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,620 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:30,659 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:32,278 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:57:00] 2025-12-13 11:56:43,061 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:57:00] 2025-12-13 11:56:44,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684815816512)>', '<ExcThread(monitor, started 139684315379456)>']
[2025-12-13 06:57:00] 2025-12-13 11:56:49,097 | INFO     | all workflow threads have been joined
[2025-12-13 06:57:00] 2025-12-13 11:56:49,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:57:00] 2025-12-13 11:56:49,098 | INFO     | traces error code: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:49,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:57:00] 2025-12-13 11:56:58,930 | INFO     | PID=285481 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 06:57:00] 2025-12-13 11:56:58,931 | INFO     | .. there are 23 such processes running
[2025-12-13 06:57:00] 2025-12-13 11:56:58,935 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:57:00] 2025-12-13 11:56:58,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:57:00] 2025-12-13 11:56:58,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:57:00] 2025-12-13 11:56:58,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:57:00] 2025-12-13 11:56:58,936 | INFO     | [monitor] control thread has ended
[2025-12-13 06:57:00] 2025-12-13 11:56:59,163 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:57:00] 2025-12-13 11:56:59,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:57:00] 2025-12-13 11:56:59,227 [wrapper] pilotpid: 285481
[2025-12-13 06:57:00] 2025-12-13 11:56:59,258 [wrapper] Pilot exit status: 0
[2025-12-13 06:57:00] 2025-12-13 11:56:59,407 [wrapper] pandaids: 6928958925
[2025-12-13 06:57:00] 2025-12-13 11:56:59,655 [wrapper] cleanup supervisor_pilot 1626491 285482
[2025-12-13 06:57:00] 2025-12-13 11:56:59,672 [wrapper] Test setup, not cleaning
[2025-12-13 06:57:00] 2025-12-13 11:56:59,715 [wrapper] apfmon messages muted
[2025-12-13 06:57:00] 2025-12-13 11:56:59,746 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:57:00] 2025-12-13 11:56:59,765 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:57:00]  *** Error codes and diagnostics ***
[2025-12-13 06:57:00]     "exeErrorCode": 0,
[2025-12-13 06:57:00]     "exeErrorDiag": "",
[2025-12-13 06:57:00]     "pilotErrorCode": 0,
[2025-12-13 06:57:00]     "pilotErrorDiag": "",
[2025-12-13 06:57:00]  *** Listing of results directory ***
[2025-12-13 06:57:00] total 344404
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 23:45 pilot3.tar.gz
[2025-12-13 06:57:00] -rwx------. 1 boincer umatlas     36322 Dec 12 23:50 runpilot2-wrapper.sh
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas      5112 Dec 12 23:50 queuedata.json
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas       100 Dec 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:57:00] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 00:05 run_atlas
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas       105 Dec 13 00:05 job.xml
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas 193126701 Dec 13 00:05 EVNT.47886829._000105.pool.root.1
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 00:05 start_atlas.sh
[2025-12-13 06:57:00] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 00:05 shared
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas    592416 Dec 13 00:05 input.tar.gz
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas         0 Dec 13 00:05 boinc_lockfile
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas      2537 Dec 13 00:05 pandaJob.out
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas        57 Dec 13 00:05 setup.sh.local
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas    991736 Dec 13 00:06 agis_schedconf.cvmfs.json
[2025-12-13 06:57:00] drwx------. 5 boincer umatlas      4096 Dec 13 00:06 pilot3
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas      6843 Dec 13 06:48 init_data.xml
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas 148695205 Dec 13 06:53 HITS.47886831._002618.pool.root.1
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas       531 Dec 13 06:53 boinc_task_state.xml
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas      1039 Dec 13 06:55 memory_monitor_summary.json
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas   1516240 Dec 13 06:55 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas    589176 Dec 13 06:55 log.47886831._002618.job.log.tgz.1
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas      7820 Dec 13 06:56 heartbeat.json
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 06:56 boinc_mmap_file
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas        28 Dec 13 06:56 wrapper_checkpoint.txt
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas        95 Dec 13 06:56 pilot_heartbeat.json
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas       822 Dec 13 06:56 pilotlog.txt
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas   2875448 Dec 13 06:56 log.47886831._002618.job.log.1
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas       357 Dec 13 06:57 output.list
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas       620 Dec 13 06:57 runtime_log
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas   3481600 Dec 13 06:57 result.tar.gz
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas      9348 Dec 13 06:57 runtime_log.err
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas       656 Dec 13 06:57 7KPNDmNlWo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOjRKDmTd9bIm.diag
[2025-12-13 06:57:00] -rw-r--r--. 1 boincer umatlas     21037 Dec 13 06:57 stderr.txt
[2025-12-13 06:57:00] HITS file was successfully produced:
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas 148695205 Dec 13 06:53 shared/HITS.pool.root.1
[2025-12-13 06:57:00]  *** Contents of shared directory: ***
[2025-12-13 06:57:00] total 337820
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas 193126701 Dec 13 00:05 ATLAS.root_0
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 00:05 start_atlas.sh
[2025-12-13 06:57:00] -rw-r--r--. 2 boincer umatlas    592416 Dec 13 00:05 input.tar.gz
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas 148695205 Dec 13 06:53 HITS.pool.root.1
[2025-12-13 06:57:00] -rw-------. 1 boincer umatlas   3481600 Dec 13 06:57 result.tar.gz
06:57:02 (272591): run_atlas exited; CPU time 47431.946663
06:57:02 (272591): called boinc_finish(0)

</stderr_txt>
]]>

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